Protein–RNA interactions for Protein: P0CX68

TY1A-LR1, Transposon Ty1-LR1 Gag polyprotein, yeastyeast

Predictions only

Length 440 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
TY1A-LR1P0CX68 RAD4YER162C 2265 nt3.41□□□□□ -1.86
TY1A-LR1P0CX68 FAT1YBR041W 2010 nt3.41□□□□□ -1.86
TY1A-LR1P0CX68 RPS30BYOR182C 192 nt3.41□□□□□ -1.86
TY1A-LR1P0CX68 LYS14YDR034C 2373 nt3.41□□□□□ -1.86
TY1A-LR1P0CX68 APE2YKL157W 2859 nt3.41□□□□□ -1.86
TY1A-LR1P0CX68 snR81snR81 201 nt3.4□□□□□ -1.87
TY1A-LR1P0CX68 OSH3YHR073W 2991 nt3.4□□□□□ -1.87
TY1A-LR1P0CX68 SPT6YGR116W 4356 nt3.4□□□□□ -1.87
TY1A-LR1P0CX68 MAK21YDR060W 3078 nt3.39□□□□□ -1.87
TY1A-LR1P0CX68 NOP10YHR072W-A 177 nt3.39□□□□□ -1.87
TY1A-LR1P0CX68 ECM15YBL001C 315 nt3.39□□□□□ -1.87
TY1A-LR1P0CX68 ALA1YOR335C 2877 nt3.38□□□□□ -1.87
TY1A-LR1P0CX68 CHS2YBR038W 2892 nt3.37□□□□□ -1.87
TY1A-LR1P0CX68 YPR022CYPR022C 3402 nt3.37□□□□□ -1.87
TY1A-LR1P0CX68 RAD26YJR035W 3258 nt3.37□□□□□ -1.87
TY1A-LR1P0CX68 YLR154C-HYLR154C-H 132 nt3.37□□□□□ -1.87
TY1A-LR1P0CX68 YLR156C-AYLR156C-A 132 nt3.37□□□□□ -1.87
TY1A-LR1P0CX68 YLR157C-CYLR157C-C 132 nt3.37□□□□□ -1.87
TY1A-LR1P0CX68 YLR159C-AYLR159C-A 132 nt3.37□□□□□ -1.87
TY1A-LR1P0CX68 RPS8AYBL072C 603 nt3.37□□□□□ -1.87
TY1A-LR1P0CX68 CRM1YGR218W 3255 nt3.36□□□□□ -1.87
TY1A-LR1P0CX68 YOR108C-AYOR108C-A 210 nt3.36□□□□□ -1.87
TY1A-LR1P0CX68 PRP6YBR055C 2700 nt3.36□□□□□ -1.87
TY1A-LR1P0CX68 DNL4YOR005C 2835 nt3.36□□□□□ -1.87
TY1A-LR1P0CX68 TAE2YPL009C 3117 nt3.36□□□□□ -1.87
TY1A-LR1P0CX68 YDR186CYDR186C 2634 nt3.36□□□□□ -1.87
TY1A-LR1P0CX68 YNR065CYNR065C 3351 nt3.35□□□□□ -1.87
TY1A-LR1P0CX68 KAP104YBR017C 2757 nt3.35□□□□□ -1.87
TY1A-LR1P0CX68 SET2YJL168C 2202 nt3.35□□□□□ -1.87
TY1A-LR1P0CX68 YDR371C-AYDR371C-A 105 nt3.35□□□□□ -1.87
TY1A-LR1P0CX68 COX12YLR038C 252 nt3.35□□□□□ -1.87
TY1A-LR1P0CX68 TSC11YER093C 4293 nt3.35□□□□□ -1.87
TY1A-LR1P0CX68 GCR1YPL075W 2358 nt3.34□□□□□ -1.87
TY1A-LR1P0CX68 MIT1YEL007W 2001 nt3.34□□□□□ -1.87
TY1A-LR1P0CX68 HRD3YLR207W 2502 nt3.34□□□□□ -1.87
TY1A-LR1P0CX68 RAD34YDR314C 2079 nt3.34□□□□□ -1.87
TY1A-LR1P0CX68 RAD5YLR032W 3510 nt3.34□□□□□ -1.87
TY1A-LR1P0CX68 MTR4YJL050W 3222 nt3.34□□□□□ -1.87
TY1A-LR1P0CX68 tX(XXX)DtX(XXX)D 100 nt3.34□□□□□ -1.87
TY1A-LR1P0CX68 MGR2YPL098C 342 nt3.34□□□□□ -1.87
TY1A-LR1P0CX68 IRR1YIL026C 3453 nt3.33□□□□□ -1.88
TY1A-LR1P0CX68 SYT1YPR095C 3681 nt3.33□□□□□ -1.88
TY1A-LR1P0CX68 SLM1YIL105C 2061 nt3.33□□□□□ -1.88
TY1A-LR1P0CX68 SPT4YGR063C 309 nt3.33□□□□□ -1.88
TY1A-LR1P0CX68 YMR242W-AYMR242W-A 90 nt3.33□□□□□ -1.88
TY1A-LR1P0CX68 YHR080CYHR080C 4038 nt3.33□□□□□ -1.88
TY1A-LR1P0CX68 ZRG8YER033C 3231 nt3.32□□□□□ -1.88
TY1A-LR1P0CX68 RCO1YMR075W 2055 nt3.32□□□□□ -1.88
TY1A-LR1P0CX68 STE11YLR362W 2154 nt3.32□□□□□ -1.88
TY1A-LR1P0CX68 PTP2YOR208W 2253 nt3.32□□□□□ -1.88
TY1A-LR1P0CX68 QCR9YGR183C 201 nt3.32□□□□□ -1.88
TY1A-LR1P0CX68 YAL037C-AYAL037C-A 93 nt3.32□□□□□ -1.88
TY1A-LR1P0CX68 RGA2YDR379W 3030 nt3.31□□□□□ -1.88
TY1A-LR1P0CX68 SEC63YOR254C 1992 nt3.31□□□□□ -1.88
TY1A-LR1P0CX68 YDR464C-AYDR464C-A 189 nt3.31□□□□□ -1.88
TY1A-LR1P0CX68 NET1YJL076W 3570 nt3.31□□□□□ -1.88
TY1A-LR1P0CX68 RPO21YDL140C 5202 nt3.31□□□□□ -1.88
TY1A-LR1P0CX68 AFI1YOR129C 2682 nt3.31□□□□□ -1.88
TY1A-LR1P0CX68 INP53YOR109W 3324 nt3.3□□□□□ -1.88
TY1A-LR1P0CX68 IRC8YJL051W 2469 nt3.3□□□□□ -1.88
TY1A-LR1P0CX68 YIL002W-AYIL002W-A 210 nt3.29□□□□□ -1.88
TY1A-LR1P0CX68 MET5YJR137C 4329 nt3.29□□□□□ -1.88
TY1A-LR1P0CX68 MYO3YKL129C 3819 nt3.29□□□□□ -1.88
TY1A-LR1P0CX68 SAS3YBL052C 2496 nt3.29□□□□□ -1.88
TY1A-LR1P0CX68 SRO77YBL106C 3033 nt3.28□□□□□ -1.88
TY1A-LR1P0CX68 TAF1YGR274C 3201 nt3.28□□□□□ -1.88
TY1A-LR1P0CX68 YME2YMR302C 2553 nt3.28□□□□□ -1.88
TY1A-LR1P0CX68 HEF3YNL014W 3135 nt3.28□□□□□ -1.88
TY1A-LR1P0CX68 STU1YBL034C 4542 nt3.27□□□□□ -1.89
TY1A-LR1P0CX68 ZDS2YML109W 2829 nt3.27□□□□□ -1.89
TY1A-LR1P0CX68 YLR035C-AYLR035C-A 3468 nt3.27□□□□□ -1.89
TY1A-LR1P0CX68 SET3YKR029C 2256 nt3.27□□□□□ -1.89
TY1A-LR1P0CX68 TCB3YML072C 4638 nt3.27□□□□□ -1.89
TY1A-LR1P0CX68 NAM7YMR080C 2916 nt3.26□□□□□ -1.89
TY1A-LR1P0CX68 YHR131W-AYHR131W-A 246 nt3.26□□□□□ -1.89
TY1A-LR1P0CX68 UTP8YGR128C 2142 nt3.26□□□□□ -1.89
TY1A-LR1P0CX68 YLL054CYLL054C 2532 nt3.26□□□□□ -1.89
TY1A-LR1P0CX68 RRP6YOR001W 2202 nt3.25□□□□□ -1.89
TY1A-LR1P0CX68 ZIP1YDR285W 2628 nt3.25□□□□□ -1.89
TY1A-LR1P0CX68 SSM4YIL030C 3960 nt3.25□□□□□ -1.89
TY1A-LR1P0CX68 MAD1YGL086W 2250 nt3.25□□□□□ -1.89
TY1A-LR1P0CX68 YGL182CYGL182C 324 nt3.25□□□□□ -1.89
TY1A-LR1P0CX68 YKR075W-AYKR075W-A 270 nt3.25□□□□□ -1.89
TY1A-LR1P0CX68 MRPL39YML009C 213 nt3.25□□□□□ -1.89
TY1A-LR1P0CX68 SMC2YFR031C 3513 nt3.25□□□□□ -1.89
TY1A-LR1P0CX68 TTI1YKL033W 3117 nt3.24□□□□□ -1.89
TY1A-LR1P0CX68 STB4YMR019W 2850 nt3.24□□□□□ -1.89
TY1A-LR1P0CX68 YDR354C-AYDR354C-A 144 nt3.24□□□□□ -1.89
TY1A-LR1P0CX68 PAU8YAL068C 363 nt3.24□□□□□ -1.89
TY1A-LR1P0CX68 PAU18YLL064C 363 nt3.24□□□□□ -1.89
TY1A-LR1P0CX68 PAU6YNR076W 363 nt3.24□□□□□ -1.89
TY1A-LR1P0CX68 PAU20YOL161C 363 nt3.24□□□□□ -1.89
TY1A-LR1P0CX68 CRS5YOR031W 210 nt3.24□□□□□ -1.89
TY1A-LR1P0CX68 BMS1YPL217C 3552 nt3.24□□□□□ -1.89
TY1A-LR1P0CX68 SLX4YLR135W 2247 nt3.24□□□□□ -1.89
TY1A-LR1P0CX68 YNL018CYNL018C 1839 nt3.23□□□□□ -1.89
TY1A-LR1P0CX68 HSH155YMR288W 2916 nt3.23□□□□□ -1.89
TY1A-LR1P0CX68 SET1YHR119W 3243 nt3.23□□□□□ -1.89
TY1A-LR1P0CX68 YNL266WYNL266W 420 nt3.23□□□□□ -1.89
TY1A-LR1P0CX68 DGR2YKL121W 2559 nt3.22□□□□□ -1.89
Retrieved 100 of 7,029 protein–RNA pairs in 19 ms