Protein–RNA interactions for Protein: P0C2I4

TY1A-H, Transposon Ty1-H Gag polyprotein, yeastyeast

Known RBP Predictions only

Length 478 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
TY1A-HP0C2I4 YAL067W-AYAL067W-A 228 nt3.42□□□□□ -1.86
TY1A-HP0C2I4 SWI3YJL176C 2478 nt3.42□□□□□ -1.86
TY1A-HP0C2I4 MSK1YNL073W 1731 nt3.41□□□□□ -1.86
TY1A-HP0C2I4 YAT2YER024W 2772 nt3.41□□□□□ -1.86
TY1A-HP0C2I4 RAD4YER162C 2265 nt3.41□□□□□ -1.86
TY1A-HP0C2I4 FAT1YBR041W 2010 nt3.41□□□□□ -1.86
TY1A-HP0C2I4 RPS30BYOR182C 192 nt3.41□□□□□ -1.86
TY1A-HP0C2I4 LYS14YDR034C 2373 nt3.41□□□□□ -1.86
TY1A-HP0C2I4 snR81snR81 201 nt3.4□□□□□ -1.87
TY1A-HP0C2I4 NCR1YPL006W 3513 nt3.4□□□□□ -1.87
TY1A-HP0C2I4 MAK21YDR060W 3078 nt3.39□□□□□ -1.87
TY1A-HP0C2I4 NOP10YHR072W-A 177 nt3.39□□□□□ -1.87
TY1A-HP0C2I4 tL(UAG)JtL(UAG)J 82 nt3.38□□□□□ -1.87
TY1A-HP0C2I4 tL(UAG)L1tL(UAG)L1 82 nt3.38□□□□□ -1.87
TY1A-HP0C2I4 tL(UAG)L2tL(UAG)L2 82 nt3.38□□□□□ -1.87
TY1A-HP0C2I4 CHS2YBR038W 2892 nt3.37□□□□□ -1.87
TY1A-HP0C2I4 YPR022CYPR022C 3402 nt3.37□□□□□ -1.87
TY1A-HP0C2I4 SPT6YGR116W 4356 nt3.37□□□□□ -1.87
TY1A-HP0C2I4 tS(AGA)D3tS(AGA)D3 83 nt3.37□□□□□ -1.87
TY1A-HP0C2I4 YLR154C-HYLR154C-H 132 nt3.37□□□□□ -1.87
TY1A-HP0C2I4 YLR156C-AYLR156C-A 132 nt3.37□□□□□ -1.87
TY1A-HP0C2I4 YLR157C-CYLR157C-C 132 nt3.37□□□□□ -1.87
TY1A-HP0C2I4 YLR159C-AYLR159C-A 132 nt3.37□□□□□ -1.87
TY1A-HP0C2I4 RPS8AYBL072C 603 nt3.37□□□□□ -1.87
TY1A-HP0C2I4 CRM1YGR218W 3255 nt3.36□□□□□ -1.87
TY1A-HP0C2I4 YOR108C-AYOR108C-A 210 nt3.36□□□□□ -1.87
TY1A-HP0C2I4 PRP6YBR055C 2700 nt3.36□□□□□ -1.87
TY1A-HP0C2I4 DNL4YOR005C 2835 nt3.36□□□□□ -1.87
TY1A-HP0C2I4 TAE2YPL009C 3117 nt3.36□□□□□ -1.87
TY1A-HP0C2I4 XRS2YDR369C 2565 nt3.36□□□□□ -1.87
TY1A-HP0C2I4 YDR186CYDR186C 2634 nt3.36□□□□□ -1.87
TY1A-HP0C2I4 YNR065CYNR065C 3351 nt3.35□□□□□ -1.87
TY1A-HP0C2I4 KAP104YBR017C 2757 nt3.35□□□□□ -1.87
TY1A-HP0C2I4 SET2YJL168C 2202 nt3.35□□□□□ -1.87
TY1A-HP0C2I4 YDR371C-AYDR371C-A 105 nt3.35□□□□□ -1.87
TY1A-HP0C2I4 COX12YLR038C 252 nt3.35□□□□□ -1.87
TY1A-HP0C2I4 TSC11YER093C 4293 nt3.35□□□□□ -1.87
TY1A-HP0C2I4 GCR1YPL075W 2358 nt3.34□□□□□ -1.87
TY1A-HP0C2I4 MIT1YEL007W 2001 nt3.34□□□□□ -1.87
TY1A-HP0C2I4 HRD3YLR207W 2502 nt3.34□□□□□ -1.87
TY1A-HP0C2I4 RAD34YDR314C 2079 nt3.34□□□□□ -1.87
TY1A-HP0C2I4 RAD5YLR032W 3510 nt3.34□□□□□ -1.87
TY1A-HP0C2I4 IRR1YIL026C 3453 nt3.33□□□□□ -1.88
TY1A-HP0C2I4 SYT1YPR095C 3681 nt3.33□□□□□ -1.88
TY1A-HP0C2I4 SLM1YIL105C 2061 nt3.33□□□□□ -1.88
TY1A-HP0C2I4 SPT4YGR063C 309 nt3.33□□□□□ -1.88
TY1A-HP0C2I4 RDN5-1RDN5-1 121 nt3.33□□□□□ -1.88
TY1A-HP0C2I4 RDN5-6RDN5-6 121 nt3.33□□□□□ -1.88
TY1A-HP0C2I4 YMR242W-AYMR242W-A 90 nt3.33□□□□□ -1.88
TY1A-HP0C2I4 YHR080CYHR080C 4038 nt3.33□□□□□ -1.88
TY1A-HP0C2I4 ZRG8YER033C 3231 nt3.32□□□□□ -1.88
TY1A-HP0C2I4 RCO1YMR075W 2055 nt3.32□□□□□ -1.88
TY1A-HP0C2I4 STE11YLR362W 2154 nt3.32□□□□□ -1.88
TY1A-HP0C2I4 PTP2YOR208W 2253 nt3.32□□□□□ -1.88
TY1A-HP0C2I4 ARO1YDR127W 4767 nt3.32□□□□□ -1.88
TY1A-HP0C2I4 QCR9YGR183C 201 nt3.32□□□□□ -1.88
TY1A-HP0C2I4 YAL037C-AYAL037C-A 93 nt3.32□□□□□ -1.88
TY1A-HP0C2I4 MTC4YBR255W 2085 nt3.32□□□□□ -1.88
TY1A-HP0C2I4 RGA2YDR379W 3030 nt3.31□□□□□ -1.88
TY1A-HP0C2I4 SEC63YOR254C 1992 nt3.31□□□□□ -1.88
TY1A-HP0C2I4 NET1YJL076W 3570 nt3.31□□□□□ -1.88
TY1A-HP0C2I4 AFI1YOR129C 2682 nt3.31□□□□□ -1.88
TY1A-HP0C2I4 INP53YOR109W 3324 nt3.3□□□□□ -1.88
TY1A-HP0C2I4 IRC8YJL051W 2469 nt3.3□□□□□ -1.88
TY1A-HP0C2I4 YIL002W-AYIL002W-A 210 nt3.29□□□□□ -1.88
TY1A-HP0C2I4 MET5YJR137C 4329 nt3.29□□□□□ -1.88
TY1A-HP0C2I4 RTC1YOL138C 4026 nt3.29□□□□□ -1.88
TY1A-HP0C2I4 SAS3YBL052C 2496 nt3.29□□□□□ -1.88
TY1A-HP0C2I4 SRO77YBL106C 3033 nt3.28□□□□□ -1.88
TY1A-HP0C2I4 RAD26YJR035W 3258 nt3.28□□□□□ -1.88
TY1A-HP0C2I4 YME2YMR302C 2553 nt3.28□□□□□ -1.88
TY1A-HP0C2I4 STU1YBL034C 4542 nt3.27□□□□□ -1.89
TY1A-HP0C2I4 ZDS2YML109W 2829 nt3.27□□□□□ -1.89
TY1A-HP0C2I4 YGL063C-AYGL063C-A 150 nt3.27□□□□□ -1.89
TY1A-HP0C2I4 YLR035C-AYLR035C-A 3468 nt3.27□□□□□ -1.89
TY1A-HP0C2I4 SET3YKR029C 2256 nt3.27□□□□□ -1.89
TY1A-HP0C2I4 TCB3YML072C 4638 nt3.27□□□□□ -1.89
TY1A-HP0C2I4 NAM7YMR080C 2916 nt3.26□□□□□ -1.89
TY1A-HP0C2I4 APE2YKL157W 2859 nt3.26□□□□□ -1.89
TY1A-HP0C2I4 YHR131W-AYHR131W-A 246 nt3.26□□□□□ -1.89
TY1A-HP0C2I4 UTP8YGR128C 2142 nt3.26□□□□□ -1.89
TY1A-HP0C2I4 YLL054CYLL054C 2532 nt3.26□□□□□ -1.89
TY1A-HP0C2I4 RRP6YOR001W 2202 nt3.25□□□□□ -1.89
TY1A-HP0C2I4 ZIP1YDR285W 2628 nt3.25□□□□□ -1.89
TY1A-HP0C2I4 MAD1YGL086W 2250 nt3.25□□□□□ -1.89
TY1A-HP0C2I4 YGL182CYGL182C 324 nt3.25□□□□□ -1.89
TY1A-HP0C2I4 YKR075W-AYKR075W-A 270 nt3.25□□□□□ -1.89
TY1A-HP0C2I4 YOL019W-AYOL019W-A 153 nt3.25□□□□□ -1.89
TY1A-HP0C2I4 SMC2YFR031C 3513 nt3.25□□□□□ -1.89
TY1A-HP0C2I4 OSH3YHR073W 2991 nt3.24□□□□□ -1.89
TY1A-HP0C2I4 TTI1YKL033W 3117 nt3.24□□□□□ -1.89
TY1A-HP0C2I4 STB4YMR019W 2850 nt3.24□□□□□ -1.89
TY1A-HP0C2I4 YDR354C-AYDR354C-A 144 nt3.24□□□□□ -1.89
TY1A-HP0C2I4 YDR464C-AYDR464C-A 189 nt3.24□□□□□ -1.89
TY1A-HP0C2I4 PAU8YAL068C 363 nt3.24□□□□□ -1.89
TY1A-HP0C2I4 PAU18YLL064C 363 nt3.24□□□□□ -1.89
TY1A-HP0C2I4 PAU6YNR076W 363 nt3.24□□□□□ -1.89
TY1A-HP0C2I4 PAU20YOL161C 363 nt3.24□□□□□ -1.89
TY1A-HP0C2I4 CRS5YOR031W 210 nt3.24□□□□□ -1.89
TY1A-HP0C2I4 SLX4YLR135W 2247 nt3.24□□□□□ -1.89
Retrieved 100 of 7,029 protein–RNA pairs in 38.1 ms