Protein–RNA interactions for Protein: P07384

CAPN1, Calpain-1 catalytic subunit, humanhuman

Predictions only

Length 714 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN1P07384 KCNQ5-201ENST00000342056 6688 ntAPPRIS ALT1 TSL 5 BASIC19.86■□□□□ 0.77
CAPN1P07384 COPS7A-208ENST00000538410 1610 ntTSL 3 BASIC19.86■□□□□ 0.77
CAPN1P07384 ALDOA-221ENST00000566897 2448 ntAPPRIS P2 TSL 2 BASIC19.86■□□□□ 0.77
CAPN1P07384 CPT2-203ENST00000635862 2319 ntTSL 5 BASIC19.86■□□□□ 0.77
CAPN1P07384 CACNB2-203ENST00000352115 1911 ntTSL 1 (best) BASIC19.86■□□□□ 0.77
CAPN1P07384 PRELID3B-201ENST00000355937 2626 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
CAPN1P07384 TMPRSS5-212ENST00000545579 2163 ntAPPRIS ALT2 TSL 1 (best) BASIC19.85■□□□□ 0.77
CAPN1P07384 HAUS4-203ENST00000347758 1428 ntTSL 2 BASIC19.85■□□□□ 0.77
CAPN1P07384 GNA14-201ENST00000341700 2482 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
CAPN1P07384 PACSIN3-211ENST00000539589 2009 ntAPPRIS P1 TSL 2 BASIC19.85■□□□□ 0.77
CAPN1P07384 SEC11A-201ENST00000268220 1656 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
CAPN1P07384 TXNDC5-201ENST00000379757 2964 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
CAPN1P07384 IRF7-205ENST00000397574 1968 ntAPPRIS ALT2 TSL 1 (best) BASIC19.85■□□□□ 0.77
CAPN1P07384 P4HB-201ENST00000331483 2603 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
CAPN1P07384 XXYLT1-202ENST00000356740 564 ntTSL 2 BASIC19.85■□□□□ 0.77
CAPN1P07384 SLC29A4P1-201ENST00000398760 971 ntBASIC19.85■□□□□ 0.77
CAPN1P07384 CYP2T1P-201ENST00000432607 1285 ntBASIC19.85■□□□□ 0.77
CAPN1P07384 PSMC3IP-208ENST00000590760 664 ntTSL 1 (best) BASIC19.85■□□□□ 0.77
CAPN1P07384 ZIM2-206ENST00000599935 2226 ntAPPRIS P1 TSL 5 BASIC19.85■□□□□ 0.77
CAPN1P07384 EPS8L1-201ENST00000201647 2536 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
CAPN1P07384 CLDND1-201ENST00000341181 2161 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
CAPN1P07384 PAQR9-201ENST00000340634 2452 ntAPPRIS P1 BASIC19.85■□□□□ 0.77
CAPN1P07384 MYL5-206ENST00000506838 2956 ntTSL 2 BASIC19.85■□□□□ 0.77
CAPN1P07384 ARRB2-202ENST00000346341 1769 ntTSL 2 BASIC19.85■□□□□ 0.77
CAPN1P07384 FDXR-219ENST00000583917 1762 ntTSL 5 BASIC19.85■□□□□ 0.77
CAPN1P07384 FXYD3-203ENST00000435734 1467 ntTSL 1 (best) BASIC19.85■□□□□ 0.77
CAPN1P07384 EEF1A2-202ENST00000298049 1748 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
CAPN1P07384 OBSL1-204ENST00000404537 5841 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
CAPN1P07384 FASTK-217ENST00000540185 1609 ntTSL 5 BASIC19.84■□□□□ 0.77
CAPN1P07384 CERS4-209ENST00000559450 1637 ntAPPRIS P1 TSL 5 BASIC19.84■□□□□ 0.77
CAPN1P07384 NEURL4-203ENST00000570460 4890 ntAPPRIS ALT2 TSL 5 BASIC19.84■□□□□ 0.77
CAPN1P07384 CACTIN-202ENST00000248420 2671 ntAPPRIS P1 TSL 5 BASIC19.84■□□□□ 0.77
CAPN1P07384 RIMBP3C-202ENST00000433039 5784 ntAPPRIS P2 BASIC19.84■□□□□ 0.77
CAPN1P07384 OIP5-201ENST00000220514 1236 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
CAPN1P07384 DHRS4L2-204ENST00000537912 918 ntTSL 2 BASIC19.84■□□□□ 0.77
CAPN1P07384 KLF13-207ENST00000560473 489 ntTSL 3 BASIC19.84■□□□□ 0.77
CAPN1P07384 CIRBP-214ENST00000587896 1081 ntTSL 2 BASIC19.84■□□□□ 0.77
CAPN1P07384 TRAPPC5-203ENST00000595985 411 ntTSL 3 BASIC19.84■□□□□ 0.77
CAPN1P07384 SNX21-201ENST00000342644 1506 ntTSL 1 (best) BASIC19.84■□□□□ 0.77
CAPN1P07384 AC116050.2-201ENST00000612102 1779 ntBASIC19.84■□□□□ 0.77
CAPN1P07384 AL162377.1-201ENST00000618844 1793 ntBASIC19.84■□□□□ 0.77
CAPN1P07384 ADRA1B-201ENST00000306675 2047 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
CAPN1P07384 SUMO3-204ENST00000411651 1921 ntTSL 2 BASIC19.84■□□□□ 0.77
CAPN1P07384 GTF2IRD2B-208ENST00000619142 1932 ntTSL 1 (best) BASIC19.84■□□□□ 0.77
CAPN1P07384 CDH5-202ENST00000539168 1672 ntTSL 2 BASIC19.84■□□□□ 0.77
CAPN1P07384 LGI2-201ENST00000382114 6428 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
CAPN1P07384 ATG101-201ENST00000336854 1439 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
CAPN1P07384 HMOX2-208ENST00000570646 2147 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
CAPN1P07384 YIPF2-201ENST00000253031 2087 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.77
CAPN1P07384 LRCH4-211ENST00000619071 2098 ntTSL 5 BASIC19.83■□□□□ 0.77
CAPN1P07384 GRTP1-203ENST00000375431 1384 ntAPPRIS P3 TSL 1 (best) BASIC19.83■□□□□ 0.77
CAPN1P07384 ISYNA1-201ENST00000338128 2420 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.77
CAPN1P07384 POLDIP2-202ENST00000618887 1524 ntTSL 2 BASIC19.83■□□□□ 0.77
CAPN1P07384 SPOCK3-204ENST00000502330 2180 ntAPPRIS ALT2 TSL 1 (best) BASIC19.83■□□□□ 0.77
CAPN1P07384 MEF2D-203ENST00000368240 1905 ntTSL 1 (best) BASIC19.83■□□□□ 0.77
CAPN1P07384 MGAT1-204ENST00000427865 1919 ntAPPRIS P1 TSL 2 BASIC19.83■□□□□ 0.77
CAPN1P07384 ABHD17AP1-201ENST00000358206 933 ntBASIC19.83■□□□□ 0.77
CAPN1P07384 ZNF644-203ENST00000361321 1253 ntTSL 2 BASIC19.83■□□□□ 0.77
CAPN1P07384 PTPA-214ENST00000423100 988 ntTSL 2 BASIC19.83■□□□□ 0.77
CAPN1P07384 AL691442.1-201ENST00000505139 1042 ntAPPRIS P1 TSL 2 BASIC19.83■□□□□ 0.77
CAPN1P07384 TP53I11-215ENST00000531928 1078 ntTSL 3 BASIC19.83■□□□□ 0.77
CAPN1P07384 PAQR4-205ENST00000576565 842 ntTSL 2 BASIC19.83■□□□□ 0.77
CAPN1P07384 PFKL-212ENST00000628044 129 ntTSL 3 BASIC19.83■□□□□ 0.77
CAPN1P07384 MARS-234ENST00000630571 216 ntTSL 5 BASIC19.83■□□□□ 0.77
CAPN1P07384 MARS-235ENST00000630803 183 ntTSL 3 BASIC19.83■□□□□ 0.77
CAPN1P07384 AL445183.2-201ENST00000439621 1871 ntTSL 2 BASIC19.83■□□□□ 0.76
CAPN1P07384 UBE2H-201ENST00000355621 5151 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.76
CAPN1P07384 SLC25A22-228ENST00000628067 2692 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.76
CAPN1P07384 IGFLR1-201ENST00000246532 1645 ntAPPRIS P2 TSL 1 (best) BASIC19.83■□□□□ 0.76
CAPN1P07384 XBP1-203ENST00000403532 1824 ntAPPRIS ALT1 TSL 3 BASIC19.83■□□□□ 0.76
CAPN1P07384 EFHD2-201ENST00000375980 2419 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.76
CAPN1P07384 AVPR2-202ENST00000358927 1763 ntAPPRIS P1 TSL 5 BASIC19.83■□□□□ 0.76
CAPN1P07384 TMEM175-212ENST00000508204 1399 ntTSL 3 BASIC19.83■□□□□ 0.76
CAPN1P07384 RTCA-201ENST00000260563 1534 ntTSL 1 (best) BASIC19.82■□□□□ 0.76
CAPN1P07384 MREG-201ENST00000263268 1314 ntAPPRIS P1 TSL 2 BASIC19.82■□□□□ 0.76
CAPN1P07384 STEAP1-201ENST00000297205 1313 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
CAPN1P07384 MMP23B-201ENST00000356026 1326 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
CAPN1P07384 TADA2B-204ENST00000512388 1343 ntTSL 5 BASIC19.82■□□□□ 0.76
CAPN1P07384 TBL1Y-203ENST00000383032 2407 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
CAPN1P07384 GALNT13-201ENST00000392825 5536 ntAPPRIS P1 TSL 2 BASIC19.82■□□□□ 0.76
CAPN1P07384 TM4SF5-201ENST00000270560 708 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
CAPN1P07384 BHLHA15-201ENST00000314018 706 ntAPPRIS P1 BASIC19.82■□□□□ 0.76
CAPN1P07384 SBK2-201ENST00000344158 1056 ntAPPRIS P1 TSL 2 BASIC19.82■□□□□ 0.76
CAPN1P07384 MGST3-205ENST00000367889 1015 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
CAPN1P07384 SBK2-202ENST00000413299 1085 ntAPPRIS P1 TSL 5 BASIC19.82■□□□□ 0.76
CAPN1P07384 CT47A12-201ENST00000419982 1165 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
CAPN1P07384 AC073210.2-201ENST00000430369 194 ntBASIC19.82■□□□□ 0.76
CAPN1P07384 NAT16-202ENST00000443096 1286 ntTSL 1 (best) BASIC19.82■□□□□ 0.76
CAPN1P07384 IDH1-AS1-202ENST00000448588 489 ntTSL 3 BASIC19.82■□□□□ 0.76
CAPN1P07384 LINC02199-202ENST00000510067 1008 ntTSL 2 BASIC19.82■□□□□ 0.76
CAPN1P07384 AC008443.6-201ENST00000512508 500 ntTSL 4 BASIC19.82■□□□□ 0.76
CAPN1P07384 AP2S1-207ENST00000599990 829 ntAPPRIS ALT1 TSL 2 BASIC19.82■□□□□ 0.76
CAPN1P07384 BHLHA15-202ENST00000609256 796 ntAPPRIS P1 TSL 3 BASIC19.82■□□□□ 0.76
CAPN1P07384 DHPS-223ENST00000614126 1124 ntTSL 5 BASIC19.82■□□□□ 0.76
CAPN1P07384 AUTS2-201ENST00000342771 6173 ntAPPRIS P3 TSL 1 (best) BASIC19.82■□□□□ 0.76
CAPN1P07384 ACHE-207ENST00000428317 2159 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
CAPN1P07384 TRABD-204ENST00000395829 1628 ntAPPRIS ALT2 TSL 5 BASIC19.82■□□□□ 0.76
CAPN1P07384 GPR162-203ENST00000428545 1610 ntTSL 1 (best) BASIC19.82■□□□□ 0.76
CAPN1P07384 CPNE9-202ENST00000383831 1751 ntTSL 5 BASIC19.82■□□□□ 0.76
CAPN1P07384 RASL12-201ENST00000220062 2640 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
Retrieved 100 of 98,524 protein–RNA pairs in 61.9 ms