Protein–RNA interactions for Protein: P00352

ALDH1A1, Retinal dehydrogenase 1, humanhuman

Predictions only

Length 501 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ALDH1A1P00352 ANKRD44-204ENST00000409919 1622 ntTSL 1 (best) BASIC23.26■■□□□ 1.31
ALDH1A1P00352 GPR78-201ENST00000382487 1694 ntAPPRIS P1 TSL 1 (best) BASIC23.26■■□□□ 1.31
ALDH1A1P00352 S1PR5-204ENST00000617721 1698 ntTSL 5 BASIC23.26■■□□□ 1.31
ALDH1A1P00352 PDLIM2-221ENST00000622702 1490 ntTSL 5 BASIC23.26■■□□□ 1.31
ALDH1A1P00352 RASGRP2-205ENST00000377489 583 ntTSL 3 BASIC23.26■■□□□ 1.31
ALDH1A1P00352 GPM6B-204ENST00000398361 1033 ntTSL 2 BASIC23.26■■□□□ 1.31
ALDH1A1P00352 HDAC11-AS1-201ENST00000424112 515 ntTSL 2 BASIC23.26■■□□□ 1.31
ALDH1A1P00352 AC128688.1-201ENST00000487626 519 ntBASIC23.26■■□□□ 1.31
ALDH1A1P00352 AC063952.2-201ENST00000498792 1227 ntBASIC23.26■■□□□ 1.31
ALDH1A1P00352 NMU-205ENST00000511469 756 ntTSL 3 BASIC23.26■■□□□ 1.31
ALDH1A1P00352 SSSCA1-206ENST00000531405 879 ntTSL 2 BASIC23.26■■□□□ 1.31
ALDH1A1P00352 AC132938.3-201ENST00000579095 357 ntTSL 2 BASIC23.26■■□□□ 1.31
ALDH1A1P00352 PSMD8-202ENST00000585598 541 ntTSL 5 BASIC23.26■■□□□ 1.31
ALDH1A1P00352 C16orf74-207ENST00000602914 761 ntAPPRIS ALT2 TSL 2 BASIC23.26■■□□□ 1.31
ALDH1A1P00352 AL031985.4-201ENST00000642138 673 ntBASIC23.26■■□□□ 1.31
ALDH1A1P00352 RBBP7-202ENST00000380084 2036 ntTSL 2 BASIC23.26■■□□□ 1.31
ALDH1A1P00352 ARFIP2-204ENST00000445086 1300 ntTSL 2 BASIC23.26■■□□□ 1.31
ALDH1A1P00352 DCAKD-208ENST00000614054 2054 ntAPPRIS P1 TSL 2 BASIC23.26■■□□□ 1.31
ALDH1A1P00352 CRTAC1-202ENST00000370591 2348 ntAPPRIS P2 TSL 5 BASIC23.26■■□□□ 1.31
ALDH1A1P00352 NCF1-201ENST00000289473 1396 ntAPPRIS P1 TSL 1 (best) BASIC23.26■■□□□ 1.31
ALDH1A1P00352 FAM167A-207ENST00000534308 1642 ntAPPRIS P1 TSL 1 (best) BASIC23.26■■□□□ 1.31
ALDH1A1P00352 STK25-205ENST00000405883 1904 ntTSL 2 BASIC23.25■■□□□ 1.31
ALDH1A1P00352 EXOC3-AS1-202ENST00000623673 1663 ntBASIC23.25■■□□□ 1.31
ALDH1A1P00352 MFSD14C-208ENST00000637864 1802 ntAPPRIS ALT2 TSL 2 BASIC23.25■■□□□ 1.31
ALDH1A1P00352 GUCA1B-201ENST00000230361 1113 ntAPPRIS P1 TSL 1 (best) BASIC23.25■■□□□ 1.31
ALDH1A1P00352 RHEBL1-201ENST00000301068 1210 ntAPPRIS P1 TSL 1 (best) BASIC23.25■■□□□ 1.31
ALDH1A1P00352 TSPY14P-201ENST00000303979 915 ntBASIC23.25■■□□□ 1.31
ALDH1A1P00352 TMEM223-201ENST00000307366 1288 ntAPPRIS P1 TSL 1 (best) BASIC23.25■■□□□ 1.31
ALDH1A1P00352 INSIG1-202ENST00000342407 1127 ntTSL 2 BASIC23.25■■□□□ 1.31
ALDH1A1P00352 NDUFA1-201ENST00000371437 766 ntAPPRIS P1 TSL 1 (best) BASIC23.25■■□□□ 1.31
ALDH1A1P00352 Z98884.1-201ENST00000451646 830 ntTSL 3 BASIC23.25■■□□□ 1.31
ALDH1A1P00352 TOLLIP-AS1-201ENST00000530897 939 ntBASIC23.25■■□□□ 1.31
ALDH1A1P00352 GCHFR-205ENST00000559932 695 ntTSL 2 BASIC23.25■■□□□ 1.31
ALDH1A1P00352 AP005242.2-201ENST00000580065 1175 ntBASIC23.25■■□□□ 1.31
ALDH1A1P00352 AC011445.1-201ENST00000601911 877 ntTSL 1 (best) BASIC23.25■■□□□ 1.31
ALDH1A1P00352 UNC50-204ENST00000409975 2172 ntTSL 1 (best) BASIC23.25■■□□□ 1.31
ALDH1A1P00352 DACT1-206ENST00000556859 2239 ntAPPRIS ALT2 TSL 2 BASIC23.25■■□□□ 1.31
ALDH1A1P00352 STX5-201ENST00000294179 1794 ntAPPRIS P1 TSL 1 (best) BASIC23.24■■□□□ 1.31
ALDH1A1P00352 ADGRA2-202ENST00000412232 5651 ntAPPRIS P1 TSL 1 (best) BASIC23.24■■□□□ 1.31
ALDH1A1P00352 AMDHD2-201ENST00000293971 1459 ntAPPRIS P1 TSL 1 (best) BASIC23.24■■□□□ 1.31
ALDH1A1P00352 FSCN1P1-201ENST00000568912 1481 ntBASIC23.24■■□□□ 1.31
ALDH1A1P00352 HOXA6-201ENST00000222728 989 ntAPPRIS P1 TSL 1 (best) BASIC23.24■■□□□ 1.31
ALDH1A1P00352 GPR6-201ENST00000275169 1089 ntAPPRIS P1 BASIC23.24■■□□□ 1.31
ALDH1A1P00352 IZUMO2-201ENST00000293405 728 ntAPPRIS P2 TSL 1 (best) BASIC23.24■■□□□ 1.31
ALDH1A1P00352 C7orf50-201ENST00000357429 1294 ntAPPRIS P2 TSL 1 (best) BASIC23.24■■□□□ 1.31
ALDH1A1P00352 ERICH4-201ENST00000378187 946 ntAPPRIS P1 TSL 5 BASIC23.24■■□□□ 1.31
ALDH1A1P00352 CCT7-202ENST00000398422 1234 ntTSL 2 BASIC23.24■■□□□ 1.31
ALDH1A1P00352 PRKCB-209ENST00000498058 480 ntTSL 3 BASIC23.24■■□□□ 1.31
ALDH1A1P00352 KRT18P56-201ENST00000507275 550 ntBASIC23.24■■□□□ 1.31
ALDH1A1P00352 RNASEK-202ENST00000548577 810 ntTSL 1 (best) BASIC23.24■■□□□ 1.31
ALDH1A1P00352 PTENP1-AS-201ENST00000627688 873 ntTSL 5 BASIC23.24■■□□□ 1.31
ALDH1A1P00352 SPINK2-207ENST00000631082 392 ntTSL 5 BASIC23.24■■□□□ 1.31
ALDH1A1P00352 TCP11-203ENST00000373974 1689 ntAPPRIS ALT2 TSL 2 BASIC23.24■■□□□ 1.31
ALDH1A1P00352 ZNF410-206ENST00000540593 1722 ntTSL 2 BASIC23.24■■□□□ 1.31
ALDH1A1P00352 P2RY2-203ENST00000393597 2107 ntAPPRIS P1 TSL 1 (best) BASIC23.24■■□□□ 1.31
ALDH1A1P00352 TMEM91-203ENST00000392002 1389 ntAPPRIS P1 TSL 2 BASIC23.24■■□□□ 1.31
ALDH1A1P00352 TNFRSF25-203ENST00000351959 1441 ntAPPRIS ALT2 TSL 1 (best) BASIC23.24■■□□□ 1.31
ALDH1A1P00352 LETM2-208ENST00000524874 1459 ntTSL 5 BASIC23.24■■□□□ 1.31
ALDH1A1P00352 DISC1-223ENST00000628350 2363 ntAPPRIS ALT2 TSL 1 (best) BASIC23.23■■□□□ 1.31
ALDH1A1P00352 PSMD8-210ENST00000620216 1538 ntAPPRIS P1 TSL 1 (best) BASIC23.23■■□□□ 1.31
ALDH1A1P00352 ABHD14B-208ENST00000525795 980 ntAPPRIS P1 TSL 3 BASIC23.23■■□□□ 1.31
ALDH1A1P00352 METRN-205ENST00000568415 612 ntAPPRIS ALT2 TSL 3 BASIC23.23■■□□□ 1.31
ALDH1A1P00352 NKX2-3-202ENST00000622383 1986 ntTSL 5 BASIC23.23■■□□□ 1.31
ALDH1A1P00352 KRT18-202ENST00000388837 1420 ntAPPRIS P1 TSL 5 BASIC23.23■■□□□ 1.31
ALDH1A1P00352 TM9SF3-201ENST00000371142 6141 ntAPPRIS P1 TSL 1 (best) BASIC23.23■■□□□ 1.31
ALDH1A1P00352 MAZ-214ENST00000568544 1464 ntTSL 2 BASIC23.23■■□□□ 1.31
ALDH1A1P00352 AGBL5-201ENST00000323064 2382 ntAPPRIS ALT2 TSL 1 (best) BASIC23.22■■□□□ 1.31
ALDH1A1P00352 ARRB2-202ENST00000346341 1769 ntTSL 2 BASIC23.22■■□□□ 1.31
ALDH1A1P00352 LSM14B-201ENST00000279068 2548 ntAPPRIS P1 TSL 5 BASIC23.22■■□□□ 1.31
ALDH1A1P00352 FAM193A-211ENST00000637812 4885 ntAPPRIS ALT2 TSL 5 BASIC23.22■■□□□ 1.31
ALDH1A1P00352 COPE-203ENST00000351079 907 ntTSL 2 BASIC23.22■■□□□ 1.31
ALDH1A1P00352 AC115618.1-201ENST00000376775 549 ntTSL 3 BASIC23.22■■□□□ 1.31
ALDH1A1P00352 AL050404.1-201ENST00000424566 802 ntTSL 2 BASIC23.22■■□□□ 1.31
ALDH1A1P00352 IMMP2L-207ENST00000452895 833 ntAPPRIS P1 TSL 5 BASIC23.22■■□□□ 1.31
ALDH1A1P00352 NT5C2-211ENST00000470299 249 ntTSL 5 BASIC23.22■■□□□ 1.31
ALDH1A1P00352 AC004816.2-201ENST00000622856 284 ntTSL 5 BASIC23.22■■□□□ 1.31
ALDH1A1P00352 PRLHR-202ENST00000636925 1275 ntAPPRIS P1 BASIC23.22■■□□□ 1.31
ALDH1A1P00352 MCRS1-202ENST00000357123 1428 ntTSL 1 (best) BASIC23.22■■□□□ 1.31
ALDH1A1P00352 MED25-212ENST00000618715 1467 ntTSL 5 BASIC23.22■■□□□ 1.31
ALDH1A1P00352 DEDD2-201ENST00000336034 1882 ntAPPRIS ALT1 TSL 1 (best) BASIC23.22■■□□□ 1.31
ALDH1A1P00352 ST7L-201ENST00000343210 1866 ntAPPRIS P1 TSL 1 (best) BASIC23.22■■□□□ 1.31
ALDH1A1P00352 ISCU-202ENST00000392807 1069 ntTSL 1 (best) BASIC23.21■■□□□ 1.31
ALDH1A1P00352 AC007731.5-201ENST00000429594 644 ntAPPRIS P1 TSL 5 BASIC23.21■■□□□ 1.31
ALDH1A1P00352 ISCU-203ENST00000431221 799 ntTSL 2 BASIC23.21■■□□□ 1.31
ALDH1A1P00352 LINC01293-201ENST00000453951 1266 ntTSL 1 (best) BASIC23.21■■□□□ 1.31
ALDH1A1P00352 ECEL1P2-202ENST00000465689 757 ntBASIC23.21■■□□□ 1.31
ALDH1A1P00352 ASPHD1-203ENST00000483405 1115 ntAPPRIS ALT2 TSL 3 BASIC23.21■■□□□ 1.31
ALDH1A1P00352 LINC00636-201ENST00000494231 1264 ntTSL 1 (best) BASIC23.21■■□□□ 1.31
ALDH1A1P00352 AC026271.3-201ENST00000571884 352 ntBASIC23.21■■□□□ 1.31
ALDH1A1P00352 DGCR10-201ENST00000609839 495 ntBASIC23.21■■□□□ 1.31
ALDH1A1P00352 TSSC4-203ENST00000380996 1544 ntAPPRIS ALT2 TSL 1 (best) BASIC23.21■■□□□ 1.31
ALDH1A1P00352 ATPAF2-206ENST00000474627 1564 ntAPPRIS P1 TSL 1 (best) BASIC23.21■■□□□ 1.31
ALDH1A1P00352 LGALS9C-212ENST00000583322 1602 ntAPPRIS ALT1 TSL 5 BASIC23.21■■□□□ 1.31
ALDH1A1P00352 AC127496.7-201ENST00000625110 1798 ntBASIC23.21■■□□□ 1.31
ALDH1A1P00352 ST8SIA1-204ENST00000404299 1920 ntTSL 1 (best) BASIC23.21■■□□□ 1.31
ALDH1A1P00352 RANBP10-202ENST00000448631 2232 ntTSL 2 BASIC23.21■■□□□ 1.31
ALDH1A1P00352 LDB1-201ENST00000361198 2285 ntAPPRIS P1 TSL 1 (best) BASIC23.2■■□□□ 1.3
ALDH1A1P00352 CDYL-203ENST00000397588 2184 ntAPPRIS P1 TSL 1 (best) BASIC23.2■■□□□ 1.3
ALDH1A1P00352 PCYT2-201ENST00000331285 2147 ntTSL 2 BASIC23.2■■□□□ 1.3
ALDH1A1P00352 TMEM9B-205ENST00000534025 2083 ntAPPRIS P1 TSL 1 (best) BASIC23.2■■□□□ 1.3
Retrieved 100 of 98,524 protein–RNA pairs in 62.6 ms