Protein–RNA interactions for Protein: O96005

CLPTM1, Cleft lip and palate transmembrane protein 1, humanhuman

Predictions only

Length 669 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLPTM1O96005 WAC-202ENST00000347934 2839 ntTSL 5 BASIC19.01■□□□□ 0.63
CLPTM1O96005 ACP4-201ENST00000270593 1347 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
CLPTM1O96005 CDH23-212ENST00000616684 4814 ntTSL 5 BASIC19.01■□□□□ 0.63
CLPTM1O96005 STRN3-202ENST00000357479 2799 ntAPPRIS P1 TSL 5 BASIC19.01■□□□□ 0.63
CLPTM1O96005 SLC35F3-201ENST00000366617 2762 ntAPPRIS ALT1 TSL 1 (best) BASIC19.01■□□□□ 0.63
CLPTM1O96005 FAM117B-201ENST00000392238 5763 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
CLPTM1O96005 NKIRAS2-204ENST00000393880 1644 ntAPPRIS P1 TSL 2 BASIC19.01■□□□□ 0.63
CLPTM1O96005 KMT5A-201ENST00000330479 3069 ntAPPRIS ALT2 TSL 1 (best) BASIC19.01■□□□□ 0.63
CLPTM1O96005 LTB4R2-202ENST00000528054 3092 ntBASIC19.01■□□□□ 0.63
CLPTM1O96005 SCAND1-202ENST00000373991 1727 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
CLPTM1O96005 NAGPA-AS1-202ENST00000632058 2265 ntTSL 2 BASIC19.01■□□□□ 0.63
CLPTM1O96005 EDA-201ENST00000338901 1233 ntBASIC19.01■□□□□ 0.63
CLPTM1O96005 FEZ1-205ENST00000524435 750 ntTSL 2 BASIC19.01■□□□□ 0.63
CLPTM1O96005 SNAI3-AS1-201ENST00000563261 998 ntTSL 1 (best) BASIC19.01■□□□□ 0.63
CLPTM1O96005 CBWD3-212ENST00000616550 721 ntTSL 2 BASIC19.01■□□□□ 0.63
CLPTM1O96005 CBWD6-216ENST00000617933 721 ntTSL 3 BASIC19.01■□□□□ 0.63
CLPTM1O96005 AL355001.2-201ENST00000620617 1191 ntBASIC19.01■□□□□ 0.63
CLPTM1O96005 ISOC1-201ENST00000173527 1940 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
CLPTM1O96005 UMOD-201ENST00000302509 2477 ntAPPRIS P3 TSL 5 BASIC19.01■□□□□ 0.63
CLPTM1O96005 AF117829.1-201ENST00000519655 1398 ntTSL 5 BASIC19.01■□□□□ 0.63
CLPTM1O96005 MZF1-206ENST00000599369 2587 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
CLPTM1O96005 ENTPD8-201ENST00000344119 2111 ntTSL 1 (best) BASIC19.01■□□□□ 0.63
CLPTM1O96005 LRRC27-203ENST00000368613 2113 ntAPPRIS P3 TSL 1 (best) BASIC19.01■□□□□ 0.63
CLPTM1O96005 SOGA3-203ENST00000525778 4077 ntAPPRIS P1 TSL 5 BASIC19.01■□□□□ 0.63
CLPTM1O96005 ARNT-212ENST00000515192 2892 ntTSL 1 (best) BASIC19.01■□□□□ 0.63
CLPTM1O96005 ZNF852-201ENST00000436261 1968 ntAPPRIS P1 TSL 2 BASIC19.01■□□□□ 0.63
CLPTM1O96005 STARD3-219ENST00000580611 1989 ntTSL 5 BASIC19.01■□□□□ 0.63
CLPTM1O96005 SMC4-201ENST00000344722 5356 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
CLPTM1O96005 PXYLP1-203ENST00000502783 2066 ntTSL 2 BASIC19.01■□□□□ 0.63
CLPTM1O96005 ACAP3-202ENST00000354700 3896 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
CLPTM1O96005 KRT6C-201ENST00000252250 2289 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
CLPTM1O96005 KRT6B-201ENST00000252252 2282 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
CLPTM1O96005 C14orf79-202ENST00000547315 2370 ntAPPRIS P2 TSL 1 (best) BASIC19■□□□□ 0.63
CLPTM1O96005 CLMP-201ENST00000448775 5072 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
CLPTM1O96005 FGF8-204ENST00000347978 823 ntTSL 1 (best) BASIC19■□□□□ 0.63
CLPTM1O96005 IPO9-AS1-201ENST00000413035 839 ntTSL 3 BASIC19■□□□□ 0.63
CLPTM1O96005 C15orf61-202ENST00000557807 769 ntTSL 2 BASIC19■□□□□ 0.63
CLPTM1O96005 HOXB7-201ENST00000239165 1371 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
CLPTM1O96005 KREMEN2-202ENST00000319500 1882 ntAPPRIS ALT2 TSL 1 (best) BASIC19■□□□□ 0.63
CLPTM1O96005 FP700111.2-201ENST00000619190 1892 ntBASIC19■□□□□ 0.63
CLPTM1O96005 PKMYT1-204ENST00000440027 2061 ntTSL 2 BASIC19■□□□□ 0.63
CLPTM1O96005 SLC3A2-206ENST00000535296 2084 ntTSL 5 BASIC19■□□□□ 0.63
CLPTM1O96005 PTH2R-204ENST00000617735 2472 ntTSL 2 BASIC19■□□□□ 0.63
CLPTM1O96005 KANK4-204ENST00000371153 4665 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
CLPTM1O96005 DSCAM-201ENST00000400454 8552 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
CLPTM1O96005 CABIN1-202ENST00000337989 2422 ntAPPRIS ALT2 TSL 1 (best) BASIC19■□□□□ 0.63
CLPTM1O96005 WIPI2-203ENST00000401525 2112 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
CLPTM1O96005 CTBP2-205ENST00000411419 2036 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
CLPTM1O96005 SEPT11-201ENST00000264893 5593 ntAPPRIS P2 TSL 1 (best) BASIC19■□□□□ 0.63
CLPTM1O96005 NTN5-201ENST00000270235 1836 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
CLPTM1O96005 GOLGA6L9-202ENST00000618348 1710 ntAPPRIS P1 TSL 5 BASIC19■□□□□ 0.63
CLPTM1O96005 NIPA2-205ENST00000539711 1412 ntTSL 2 BASIC19■□□□□ 0.63
CLPTM1O96005 NUDT16L1-204ENST00000586536 1406 ntTSL 2 BASIC19■□□□□ 0.63
CLPTM1O96005 SPTBN4-202ENST00000352632 8676 ntAPPRIS P2 TSL 5 BASIC18.99■□□□□ 0.63
CLPTM1O96005 AC138430.1-201ENST00000586064 5409 ntTSL 2 BASIC18.99■□□□□ 0.63
CLPTM1O96005 ISLR2-210ENST00000565540 2780 ntAPPRIS P1 TSL 4 BASIC18.99■□□□□ 0.63
CLPTM1O96005 DMRT2-204ENST00000382251 2292 ntAPPRIS P1 TSL 5 BASIC18.99■□□□□ 0.63
CLPTM1O96005 GCGR-202ENST00000570996 1872 ntAPPRIS ALT2 TSL 2 BASIC18.99■□□□□ 0.63
CLPTM1O96005 AC020763.4-201ENST00000623414 4170 ntBASIC18.99■□□□□ 0.63
CLPTM1O96005 SLC1A6-202ENST00000430939 1794 ntTSL 2 BASIC18.99■□□□□ 0.63
CLPTM1O96005 AL121749.1-201ENST00000635993 1768 ntTSL 5 BASIC18.99■□□□□ 0.63
CLPTM1O96005 AP002761.3-201ENST00000546324 1695 ntTSL 2 BASIC18.99■□□□□ 0.63
CLPTM1O96005 ADCY6-206ENST00000550422 5877 ntTSL 2 BASIC18.99■□□□□ 0.63
CLPTM1O96005 TMEM79-203ENST00000405535 2201 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
CLPTM1O96005 ADK-206ENST00000541550 2222 ntTSL 2 BASIC18.99■□□□□ 0.63
CLPTM1O96005 LIN7B-202ENST00000391864 582 ntTSL 3 BASIC18.99■□□□□ 0.63
CLPTM1O96005 NRIP3-203ENST00000531090 980 ntTSL 2 BASIC18.99■□□□□ 0.63
CLPTM1O96005 AC142381.2-201ENST00000566120 298 ntBASIC18.99■□□□□ 0.63
CLPTM1O96005 AIPL1-209ENST00000575265 2111 ntAPPRIS ALT2 TSL 1 (best) BASIC18.99■□□□□ 0.63
CLPTM1O96005 PPP1R14A-205ENST00000591585 949 ntTSL 2 BASIC18.99■□□□□ 0.63
CLPTM1O96005 CIRBP-225ENST00000589710 1835 ntTSL 2 BASIC18.99■□□□□ 0.63
CLPTM1O96005 SAXO1-201ENST00000380530 1727 ntAPPRIS ALT2 TSL 2 BASIC18.99■□□□□ 0.63
CLPTM1O96005 TLE3-226ENST00000627388 5742 ntAPPRIS ALT1 TSL 5 BASIC18.99■□□□□ 0.63
CLPTM1O96005 MTMR14-206ENST00000420925 1427 ntAPPRIS ALT2 TSL 2 BASIC18.99■□□□□ 0.63
CLPTM1O96005 TRPM2-202ENST00000300482 5989 ntAPPRIS P3 TSL 1 (best) BASIC18.99■□□□□ 0.63
CLPTM1O96005 TMPRSS6-207ENST00000442782 1695 ntTSL 1 (best) BASIC18.98■□□□□ 0.63
CLPTM1O96005 AKAP8L-201ENST00000397410 2146 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
CLPTM1O96005 SYT8-201ENST00000341958 1556 ntAPPRIS ALT2 TSL 5 BASIC18.98■□□□□ 0.63
CLPTM1O96005 AP000547.3-201ENST00000592918 1576 ntTSL 1 (best) BASIC18.98■□□□□ 0.63
CLPTM1O96005 ZDHHC23-201ENST00000330212 3778 ntAPPRIS P2 TSL 1 (best) BASIC18.98■□□□□ 0.63
CLPTM1O96005 SUDS3P1-201ENST00000505831 966 ntBASIC18.98■□□□□ 0.63
CLPTM1O96005 AP001330.3-201ENST00000520123 633 ntBASIC18.98■□□□□ 0.63
CLPTM1O96005 AF213884.3-201ENST00000563833 479 ntBASIC18.98■□□□□ 0.63
CLPTM1O96005 AC008764.7-201ENST00000593779 1081 ntBASIC18.98■□□□□ 0.63
CLPTM1O96005 FGFR2-208ENST00000360144 3001 ntTSL 2 BASIC18.98■□□□□ 0.63
CLPTM1O96005 SNUPN-201ENST00000308588 1513 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
CLPTM1O96005 RELB-207ENST00000625761 2279 ntAPPRIS ALT2 TSL 5 BASIC18.98■□□□□ 0.63
CLPTM1O96005 LTBP1-203ENST00000404816 6333 ntAPPRIS P4 TSL 5 BASIC18.97■□□□□ 0.63
CLPTM1O96005 ACADVL-203ENST00000356839 2323 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
CLPTM1O96005 KLHL17-201ENST00000338591 2560 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
CLPTM1O96005 CWH43-201ENST00000226432 2472 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
CLPTM1O96005 ALDH6A1-201ENST00000350259 1869 ntAPPRIS ALT2 TSL 2 BASIC18.97■□□□□ 0.63
CLPTM1O96005 DR1-201ENST00000370267 1647 ntAPPRIS P1 TSL 2 BASIC18.97■□□□□ 0.63
CLPTM1O96005 IMPDH1-208ENST00000470772 1888 ntAPPRIS ALT1 TSL 5 BASIC18.97■□□□□ 0.63
CLPTM1O96005 C19orf25-207ENST00000588871 2128 ntTSL 5 BASIC18.97■□□□□ 0.63
CLPTM1O96005 THTPA-202ENST00000404535 1779 ntAPPRIS P1 TSL 2 BASIC18.97■□□□□ 0.63
CLPTM1O96005 AC068580.1-201ENST00000446489 252 ntTSL 3 BASIC18.97■□□□□ 0.63
CLPTM1O96005 MAG-206ENST00000597035 542 ntTSL 4 BASIC18.97■□□□□ 0.63
CLPTM1O96005 CNNM3-202ENST00000377060 3308 ntTSL 2 BASIC18.97■□□□□ 0.63
CLPTM1O96005 PPP5C-202ENST00000391919 1929 ntTSL 5 BASIC18.97■□□□□ 0.63
Retrieved 100 of 98,524 protein–RNA pairs in 18.9 ms