Protein–RNA interactions for Protein: O60506

SYNCRIP, Heterogeneous nuclear ribonucleoprotein Q, humanhuman

Known RBP Predictions only

Length 623 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SYNCRIPO60506 MCAT-202ENST00000327555 1134 ntTSL 1 (best) BASIC20.64■□□□□ 0.89
SYNCRIPO60506 IFI6-202ENST00000361157 841 ntAPPRIS ALT2 TSL 1 (best) BASIC20.64■□□□□ 0.89
SYNCRIPO60506 GGT1-206ENST00000404223 952 ntTSL 2 BASIC20.64■□□□□ 0.89
SYNCRIPO60506 NT5C3B-203ENST00000435506 975 ntAPPRIS P1 TSL 5 BASIC20.64■□□□□ 0.89
SYNCRIPO60506 C5orf38-206ENST00000505778 509 ntAPPRIS ALT2 TSL 1 (best) BASIC20.64■□□□□ 0.89
SYNCRIPO60506 RPPH1-201ENST00000516869 333 ntBASIC20.64■□□□□ 0.89
SYNCRIPO60506 RNF121-214ENST00000533380 870 ntTSL 3 BASIC20.64■□□□□ 0.89
SYNCRIPO60506 EIF3J-AS1-205ENST00000560750 1093 ntTSL 3 BASIC20.64■□□□□ 0.89
SYNCRIPO60506 AC044860.1-201ENST00000560756 1160 ntTSL 1 (best) BASIC20.64■□□□□ 0.89
SYNCRIPO60506 GGTLC2-204ENST00000613850 973 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
SYNCRIPO60506 GGTLC2-205ENST00000618722 1047 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
SYNCRIPO60506 CDKN2C-203ENST00000396148 2086 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
SYNCRIPO60506 PRICKLE3-206ENST00000599218 2062 ntAPPRIS P3 TSL 1 (best) BASIC20.64■□□□□ 0.89
SYNCRIPO60506 ST3GAL3-207ENST00000353126 1969 ntTSL 5 BASIC20.64■□□□□ 0.89
SYNCRIPO60506 MAPT-210ENST00000535772 5718 ntTSL 5 BASIC20.64■□□□□ 0.89
SYNCRIPO60506 TMEM125-201ENST00000432792 1850 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
SYNCRIPO60506 WAS-201ENST00000376701 1849 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
SYNCRIPO60506 UNC119-201ENST00000301032 1653 ntTSL 1 (best) BASIC20.64■□□□□ 0.89
SYNCRIPO60506 DOCK5-208ENST00000481100 2166 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
SYNCRIPO60506 NKX6-1-202ENST00000515820 2194 ntTSL 3 BASIC20.63■□□□□ 0.89
SYNCRIPO60506 FAM66E-201ENST00000529252 1433 ntTSL 2 BASIC20.63■□□□□ 0.89
SYNCRIPO60506 GRTP1-202ENST00000375430 1834 ntAPPRIS ALT2 TSL 1 (best) BASIC20.63■□□□□ 0.89
SYNCRIPO60506 SSNA1-201ENST00000322310 896 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
SYNCRIPO60506 LCE2A-201ENST00000368779 592 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
SYNCRIPO60506 POM121L13P-201ENST00000422362 380 ntBASIC20.63■□□□□ 0.89
SYNCRIPO60506 FAM163B-202ENST00000496132 811 ntAPPRIS P1 TSL 3 BASIC20.63■□□□□ 0.89
SYNCRIPO60506 RN7SL471P-201ENST00000580476 299 ntBASIC20.63■□□□□ 0.89
SYNCRIPO60506 USP36-216ENST00000589424 970 ntTSL 5 BASIC20.63■□□□□ 0.89
SYNCRIPO60506 UBE2H-201ENST00000355621 5151 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
SYNCRIPO60506 LSM14A-202ENST00000540746 2152 ntTSL 2 BASIC20.63■□□□□ 0.89
SYNCRIPO60506 FNDC10-201ENST00000422725 2085 ntAPPRIS P1 BASIC20.63■□□□□ 0.89
SYNCRIPO60506 CIZ1-203ENST00000357558 2907 ntAPPRIS ALT2 TSL 5 BASIC20.63■□□□□ 0.89
SYNCRIPO60506 PARN-205ENST00000539279 1557 ntTSL 2 BASIC20.63■□□□□ 0.89
SYNCRIPO60506 OSR1-201ENST00000272223 1936 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
SYNCRIPO60506 RELA-201ENST00000308639 2681 ntAPPRIS ALT1 TSL 1 (best) BASIC20.62■□□□□ 0.89
SYNCRIPO60506 ZNF331-202ENST00000411977 2248 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
SYNCRIPO60506 MME-217ENST00000616757 1315 ntTSL 5 BASIC20.62■□□□□ 0.89
SYNCRIPO60506 MSANTD1-204ENST00000510580 2039 ntTSL 5 BASIC20.62■□□□□ 0.89
SYNCRIPO60506 PDXDC1-205ENST00000535621 2048 ntTSL 1 (best) BASIC20.62■□□□□ 0.89
SYNCRIPO60506 F8A2-201ENST00000369505 1116 ntAPPRIS P1 BASIC20.62■□□□□ 0.89
SYNCRIPO60506 NDUFA8-201ENST00000373768 844 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
SYNCRIPO60506 MDK-205ENST00000405308 1166 ntAPPRIS P2 TSL 2 BASIC20.62■□□□□ 0.89
SYNCRIPO60506 AP000697.1-201ENST00000430607 339 ntTSL 5 BASIC20.62■□□□□ 0.89
SYNCRIPO60506 METTL21A-207ENST00000442521 1003 ntAPPRIS P1 TSL 2 BASIC20.62■□□□□ 0.89
SYNCRIPO60506 SGO1-AS1-202ENST00000448208 819 ntTSL 3 BASIC20.62■□□□□ 0.89
SYNCRIPO60506 ZNF529-AS1-202ENST00000475219 1033 ntTSL 1 (best) BASIC20.62■□□□□ 0.89
SYNCRIPO60506 TPD52L1-207ENST00000527711 999 ntTSL 2 BASIC20.62■□□□□ 0.89
SYNCRIPO60506 RHOD-202ENST00000532559 538 ntTSL 3 BASIC20.62■□□□□ 0.89
SYNCRIPO60506 AC089999.2-201ENST00000552525 248 ntTSL 3 BASIC20.62■□□□□ 0.89
SYNCRIPO60506 AC069544.1-201ENST00000609399 999 ntBASIC20.62■□□□□ 0.89
SYNCRIPO60506 SLC35A2-213ENST00000635015 1008 ntTSL 2 BASIC20.62■□□□□ 0.89
SYNCRIPO60506 ADGRL1-202ENST00000361434 5610 ntAPPRIS P3 TSL 1 (best) BASIC20.62■□□□□ 0.89
SYNCRIPO60506 FEM1AP4-201ENST00000443167 1987 ntBASIC20.62■□□□□ 0.89
SYNCRIPO60506 ZXDC-201ENST00000336332 2579 ntAPPRIS ALT2 TSL 1 (best) BASIC20.62■□□□□ 0.89
SYNCRIPO60506 AMZ1-202ENST00000407112 1862 ntTSL 2 BASIC20.62■□□□□ 0.89
SYNCRIPO60506 DDAH1-205ENST00000539042 1519 ntAPPRIS P1 TSL 5 BASIC20.62■□□□□ 0.89
SYNCRIPO60506 POLDIP2-202ENST00000618887 1524 ntTSL 2 BASIC20.62■□□□□ 0.89
SYNCRIPO60506 KCNE5-201ENST00000372101 1473 ntAPPRIS P1 BASIC20.62■□□□□ 0.89
SYNCRIPO60506 BORCS8-MEF2B-202ENST00000444486 1492 ntAPPRIS P2 TSL 2 BASIC20.62■□□□□ 0.89
SYNCRIPO60506 PGPEP1L-202ENST00000535714 1483 ntTSL 2 BASIC20.62■□□□□ 0.89
SYNCRIPO60506 AP000662.2-202ENST00000530595 2790 ntTSL 2 BASIC20.62■□□□□ 0.89
SYNCRIPO60506 ARRB2-202ENST00000346341 1769 ntTSL 2 BASIC20.62■□□□□ 0.89
SYNCRIPO60506 ERLEC1-203ENST00000405123 1756 ntTSL 5 BASIC20.62■□□□□ 0.89
SYNCRIPO60506 SPESP1-201ENST00000310673 1431 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
SYNCRIPO60506 MAG-202ENST00000392213 2390 ntAPPRIS P4 TSL 1 (best) BASIC20.61■□□□□ 0.89
SYNCRIPO60506 DUSP7-202ENST00000495880 3340 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
SYNCRIPO60506 CDC42SE2-206ENST00000503291 2025 ntTSL 1 (best) BASIC20.61■□□□□ 0.89
SYNCRIPO60506 SH3GLB2-202ENST00000372559 1365 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
SYNCRIPO60506 AUNIP-203ENST00000538789 1392 ntTSL 1 (best) BASIC20.61■□□□□ 0.89
SYNCRIPO60506 ST6GAL2-203ENST00000409087 1657 ntTSL 1 (best) BASIC20.61■□□□□ 0.89
SYNCRIPO60506 FSCN2-202ENST00000417245 1665 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
SYNCRIPO60506 PANO1-201ENST00000620120 1680 ntAPPRIS P1 BASIC20.61■□□□□ 0.89
SYNCRIPO60506 CACNA1A-218ENST00000635895 8657 ntAPPRIS ALT2 TSL 5 BASIC20.61■□□□□ 0.89
SYNCRIPO60506 CACNA1A-257ENST00000638009 8665 ntAPPRIS ALT2 TSL 1 (best) BASIC20.61■□□□□ 0.89
SYNCRIPO60506 AF106564.1-201ENST00000607058 2553 ntBASIC20.61■□□□□ 0.89
SYNCRIPO60506 DR1-201ENST00000370267 1647 ntAPPRIS P1 TSL 2 BASIC20.61■□□□□ 0.89
SYNCRIPO60506 GMPPA-205ENST00000373917 1630 ntTSL 5 BASIC20.61■□□□□ 0.89
SYNCRIPO60506 ZNF446-208ENST00000622313 1884 ntTSL 1 (best) BASIC20.61■□□□□ 0.89
SYNCRIPO60506 PALM-202ENST00000338448 2725 ntAPPRIS P4 TSL 1 (best) BASIC20.61■□□□□ 0.89
SYNCRIPO60506 GCHFR-201ENST00000260447 777 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
SYNCRIPO60506 LRRC26-201ENST00000371542 1209 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
SYNCRIPO60506 CALML5-201ENST00000380332 859 ntAPPRIS P1 BASIC20.61■□□□□ 0.89
SYNCRIPO60506 AL390719.1-204ENST00000412397 1219 ntBASIC20.61■□□□□ 0.89
SYNCRIPO60506 AC073050.1-201ENST00000442316 462 ntTSL 3 BASIC20.61■□□□□ 0.89
SYNCRIPO60506 AC008550.1-201ENST00000511500 884 ntBASIC20.61■□□□□ 0.89
SYNCRIPO60506 AC091564.5-201ENST00000526456 820 ntTSL 4 BASIC20.61■□□□□ 0.89
SYNCRIPO60506 GRAMD1B-209ENST00000533341 707 ntTSL 2 BASIC20.61■□□□□ 0.89
SYNCRIPO60506 NDUFS3-212ENST00000534208 583 ntTSL 4 BASIC20.61■□□□□ 0.89
SYNCRIPO60506 COX4I1-202ENST00000561569 716 ntAPPRIS P1 TSL 2 BASIC20.61■□□□□ 0.89
SYNCRIPO60506 AC011446.2-202ENST00000592882 756 ntTSL 3 BASIC20.61■□□□□ 0.89
SYNCRIPO60506 PPP1R12B-212ENST00000480184 1808 ntTSL 1 (best) BASIC20.61■□□□□ 0.89
SYNCRIPO60506 WT1-211ENST00000639907 1545 ntAPPRIS ALT2 TSL 2 BASIC20.61■□□□□ 0.89
SYNCRIPO60506 MAG-203ENST00000537831 2341 ntTSL 1 (best) BASIC20.61■□□□□ 0.89
SYNCRIPO60506 DAZAP2-201ENST00000412716 2598 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
SYNCRIPO60506 TEX22-201ENST00000451127 2571 ntAPPRIS P1 TSL 2 BASIC20.61■□□□□ 0.89
SYNCRIPO60506 HSDL1-202ENST00000434463 1493 ntTSL 2 BASIC20.61■□□□□ 0.89
SYNCRIPO60506 IRF3-221ENST00000598808 1468 ntTSL 5 BASIC20.61■□□□□ 0.89
SYNCRIPO60506 PAXIP1-AS1-201ENST00000608317 2256 ntBASIC20.61■□□□□ 0.89
SYNCRIPO60506 PAX1-202ENST00000444366 1850 ntAPPRIS ALT2 TSL 2 BASIC20.6■□□□□ 0.89
SYNCRIPO60506 GPR108-201ENST00000264080 2057 ntAPPRIS P2 TSL 1 (best) BASIC20.6■□□□□ 0.89
Retrieved 100 of 98,524 protein–RNA pairs in 17.8 ms