Protein–RNA interactions for Protein: O60294

LCMT2, tRNA wybutosine-synthesizing protein 4, humanhuman

Known RBP Predictions only

Length 686 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LCMT2O60294 COCH-201ENST00000216361 2397 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
LCMT2O60294 NDRG2-242ENST00000555158 2216 ntAPPRIS ALT1 TSL 1 (best) BASIC19.37■□□□□ 0.69
LCMT2O60294 FAM129C-203ENST00000449408 2004 ntAPPRIS ALT2 TSL 2 BASIC19.37■□□□□ 0.69
LCMT2O60294 DNAJC7-203ENST00000457167 2022 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
LCMT2O60294 NYAP1-202ENST00000454988 2777 ntTSL 5 BASIC19.37■□□□□ 0.69
LCMT2O60294 VRK2-207ENST00000440705 1676 ntAPPRIS ALT2 TSL 1 (best) BASIC19.36■□□□□ 0.69
LCMT2O60294 FUZ-212ENST00000528094 1479 ntTSL 2 BASIC19.36■□□□□ 0.69
LCMT2O60294 GPAA1-201ENST00000355091 2078 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
LCMT2O60294 AL512408.1-201ENST00000569378 2000 ntBASIC19.36■□□□□ 0.69
LCMT2O60294 SBK2-201ENST00000344158 1056 ntAPPRIS P1 TSL 2 BASIC19.36■□□□□ 0.69
LCMT2O60294 CBY3-201ENST00000376974 785 ntAPPRIS P1 TSL 2 BASIC19.36■□□□□ 0.69
LCMT2O60294 SBK2-202ENST00000413299 1085 ntAPPRIS P1 TSL 5 BASIC19.36■□□□□ 0.69
LCMT2O60294 SERPINH1P1-201ENST00000419794 1249 ntBASIC19.36■□□□□ 0.69
LCMT2O60294 LINC01962-201ENST00000513771 411 ntTSL 2 BASIC19.36■□□□□ 0.69
LCMT2O60294 BET1L-207ENST00000529614 560 ntTSL 5 BASIC19.36■□□□□ 0.69
LCMT2O60294 ZFYVE9-201ENST00000287727 5194 ntAPPRIS P4 TSL 5 BASIC19.36■□□□□ 0.69
LCMT2O60294 SMG8-203ENST00000578922 2178 ntBASIC19.36■□□□□ 0.69
LCMT2O60294 ATF5-202ENST00000595125 1637 ntAPPRIS P1 TSL 2 BASIC19.36■□□□□ 0.69
LCMT2O60294 MORN1-202ENST00000378529 1500 ntAPPRIS ALT2 TSL 1 (best) BASIC19.35■□□□□ 0.69
LCMT2O60294 TPCN2-205ENST00000542467 2000 ntTSL 2 BASIC19.35■□□□□ 0.69
LCMT2O60294 AOC1-202ENST00000416793 2453 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
LCMT2O60294 ODC1-202ENST00000405333 1943 ntAPPRIS P1 TSL 2 BASIC19.35■□□□□ 0.69
LCMT2O60294 AC005224.2-201ENST00000571192 1885 ntTSL 2 BASIC19.35■□□□□ 0.69
LCMT2O60294 TDRD10-202ENST00000368482 2331 ntAPPRIS P3 TSL 1 (best) BASIC19.35■□□□□ 0.69
LCMT2O60294 DTD1-201ENST00000377452 1387 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
LCMT2O60294 MAP2K5-203ENST00000354498 1783 ntTSL 2 BASIC19.35■□□□□ 0.69
LCMT2O60294 H19-201ENST00000411754 1788 ntTSL 5 BASIC19.35■□□□□ 0.69
LCMT2O60294 RUFY1-201ENST00000319449 2646 ntAPPRIS P3 TSL 1 (best) BASIC19.35■□□□□ 0.69
LCMT2O60294 TNFRSF14-201ENST00000355716 1707 ntAPPRIS P2 TSL 1 (best) BASIC19.35■□□□□ 0.69
LCMT2O60294 ARFRP1-210ENST00000614942 2554 ntTSL 5 BASIC19.35■□□□□ 0.69
LCMT2O60294 NUDT22-201ENST00000279206 1094 ntAPPRIS P3 TSL 1 (best) BASIC19.35■□□□□ 0.69
LCMT2O60294 MDK-204ENST00000395569 686 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
LCMT2O60294 GNAS-AS1-201ENST00000424094 1156 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
LCMT2O60294 AC073210.2-201ENST00000430369 194 ntBASIC19.35■□□□□ 0.69
LCMT2O60294 AC069152.1-201ENST00000438030 544 ntBASIC19.35■□□□□ 0.69
LCMT2O60294 NUDT22-204ENST00000441250 986 ntAPPRIS ALT2 TSL 5 BASIC19.35■□□□□ 0.69
LCMT2O60294 ANKRD65-202ENST00000442470 876 ntTSL 2 BASIC19.35■□□□□ 0.69
LCMT2O60294 DIMT1-202ENST00000506390 1208 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
LCMT2O60294 TP53I11-215ENST00000531928 1078 ntTSL 3 BASIC19.35■□□□□ 0.69
LCMT2O60294 LINC01956-201ENST00000557729 695 ntTSL 5 BASIC19.35■□□□□ 0.69
LCMT2O60294 EMC9-206ENST00000560403 872 ntTSL 2 BASIC19.35■□□□□ 0.69
LCMT2O60294 MAGIX-202ENST00000595224 1238 ntAPPRIS P2 TSL 5 BASIC19.35■□□□□ 0.69
LCMT2O60294 OGFR-204ENST00000621591 1194 ntTSL 5 BASIC19.35■□□□□ 0.69
LCMT2O60294 DPP3P2-201ENST00000416030 1696 ntBASIC19.35■□□□□ 0.69
LCMT2O60294 LONP1-203ENST00000585374 2882 ntTSL 5 BASIC19.35■□□□□ 0.69
LCMT2O60294 KREMEN2-201ENST00000303746 2326 ntAPPRIS P4 TSL 1 (best) BASIC19.35■□□□□ 0.69
LCMT2O60294 IRX3-201ENST00000329734 2601 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
LCMT2O60294 XBP1-203ENST00000403532 1824 ntAPPRIS ALT1 TSL 3 BASIC19.35■□□□□ 0.69
LCMT2O60294 FN3K-201ENST00000300784 1434 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
LCMT2O60294 RNH1-202ENST00000356187 1791 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
LCMT2O60294 TANGO2-217ENST00000456048 2439 ntTSL 2 BASIC19.34■□□□□ 0.69
LCMT2O60294 SPATA22-210ENST00000573128 1704 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
LCMT2O60294 GLIPR2-203ENST00000396613 1917 ntTSL 4 BASIC19.34■□□□□ 0.69
LCMT2O60294 TMEM218-201ENST00000279968 1034 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
LCMT2O60294 MAGI2-AS3-209ENST00000448195 774 ntTSL 3 BASIC19.34■□□□□ 0.69
LCMT2O60294 NME6-213ENST00000451657 871 ntTSL 2 BASIC19.34■□□□□ 0.69
LCMT2O60294 HES2-205ENST00000487437 968 ntTSL 3 BASIC19.34■□□□□ 0.69
LCMT2O60294 AC099522.1-201ENST00000505955 881 ntTSL 3 BASIC19.34■□□□□ 0.69
LCMT2O60294 MYC-209ENST00000641252 345 ntBASIC19.34■□□□□ 0.69
LCMT2O60294 AC133041.1-202ENST00000642053 222 ntBASIC19.34■□□□□ 0.69
LCMT2O60294 ACBD4-201ENST00000321854 1806 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
LCMT2O60294 GLG1-214ENST00000627032 2147 ntTSL 5 BASIC19.34■□□□□ 0.69
LCMT2O60294 GSN-204ENST00000373818 2657 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
LCMT2O60294 PRKG2-207ENST00000628926 2623 ntTSL 2 BASIC19.34■□□□□ 0.69
LCMT2O60294 ZNF688-201ENST00000223459 2506 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.69
LCMT2O60294 TDRP-202ENST00000427263 2465 ntTSL 1 (best) BASIC19.33■□□□□ 0.69
LCMT2O60294 SNRPA-201ENST00000243563 1621 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.69
LCMT2O60294 DPF1-217ENST00000614244 2356 ntTSL 1 (best) BASIC19.33■□□□□ 0.69
LCMT2O60294 SETD6-201ENST00000219315 1553 ntAPPRIS ALT2 TSL 1 (best) BASIC19.33■□□□□ 0.69
LCMT2O60294 NTN5-201ENST00000270235 1836 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.69
LCMT2O60294 SMIM3-201ENST00000526627 2332 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.69
LCMT2O60294 RHEB-204ENST00000472642 900 ntTSL 3 BASIC19.33■□□□□ 0.68
LCMT2O60294 AC097658.1-201ENST00000475555 843 ntBASIC19.33■□□□□ 0.68
LCMT2O60294 RRAS2-203ENST00000526063 970 ntTSL 1 (best) BASIC19.33■□□□□ 0.68
LCMT2O60294 RRAS2-208ENST00000532814 982 ntTSL 1 (best) BASIC19.33■□□□□ 0.68
LCMT2O60294 BRWD1-AS2-201ENST00000603064 1028 ntBASIC19.33■□□□□ 0.68
LCMT2O60294 GNS-207ENST00000542058 2020 ntAPPRIS ALT2 TSL 2 BASIC19.33■□□□□ 0.68
LCMT2O60294 CRHR1-203ENST00000339069 2490 ntTSL 2 BASIC19.33■□□□□ 0.68
LCMT2O60294 IKZF1-209ENST00000438033 1748 ntTSL 2 BASIC19.33■□□□□ 0.68
LCMT2O60294 UNKL-205ENST00000397464 2180 ntTSL 2 BASIC19.33■□□□□ 0.68
LCMT2O60294 POLD2-202ENST00000406581 2158 ntAPPRIS P1 TSL 2 BASIC19.33■□□□□ 0.68
LCMT2O60294 LINC01011-201ENST00000445000 2811 ntTSL 2 BASIC19.33■□□□□ 0.68
LCMT2O60294 IMPDH1-208ENST00000470772 1888 ntAPPRIS ALT1 TSL 5 BASIC19.33■□□□□ 0.68
LCMT2O60294 POMGNT1-201ENST00000371984 2728 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
LCMT2O60294 TMEM243-201ENST00000257637 1063 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
LCMT2O60294 LRR1-202ENST00000318317 957 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
LCMT2O60294 UBE2C-203ENST00000352551 665 ntTSL 2 BASIC19.32■□□□□ 0.68
LCMT2O60294 NOXO1-203ENST00000397280 1147 ntAPPRIS ALT2 TSL 1 (best) BASIC19.32■□□□□ 0.68
LCMT2O60294 CTBP1-AS2-203ENST00000507044 739 ntTSL 3 BASIC19.32■□□□□ 0.68
LCMT2O60294 KLF13-207ENST00000560473 489 ntTSL 3 BASIC19.32■□□□□ 0.68
LCMT2O60294 PTMS-207ENST00000619580 1150 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
LCMT2O60294 BACE1-209ENST00000513780 1465 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
LCMT2O60294 GNG4-203ENST00000391854 5104 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
LCMT2O60294 RFXANK-201ENST00000303088 1407 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
LCMT2O60294 PHF20L1-214ENST00000485595 1810 ntTSL 2 BASIC19.32■□□□□ 0.68
LCMT2O60294 AL158151.1-201ENST00000372490 2047 ntTSL 2 BASIC19.32■□□□□ 0.68
LCMT2O60294 BRSK2-208ENST00000528841 3586 ntAPPRIS ALT2 TSL 1 (best) BASIC19.32■□□□□ 0.68
LCMT2O60294 PCMT1-205ENST00000464889 1984 ntAPPRIS P3 TSL 1 (best) BASIC19.32■□□□□ 0.68
LCMT2O60294 NDOR1-201ENST00000344894 1794 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
LCMT2O60294 AL162377.1-201ENST00000618844 1793 ntBASIC19.32■□□□□ 0.68
Retrieved 100 of 98,524 protein–RNA pairs in 78.3 ms