Protein–RNA interactions for Protein: O43347

MSI1, RNA-binding protein Musashi homolog 1, humanhuman

Known RBP Predictions only

Length 362 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MSI1O43347 CD99-210ENST00000611428 1243 ntAPPRIS ALT2 TSL 1 (best) BASIC21.02■□□□□ 0.96
MSI1O43347 WT1-211ENST00000639907 1545 ntAPPRIS ALT2 TSL 2 BASIC21.02■□□□□ 0.96
MSI1O43347 INPPL1-201ENST00000298229 4733 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
MSI1O43347 CPNE9-202ENST00000383831 1751 ntTSL 5 BASIC21.02■□□□□ 0.96
MSI1O43347 CEL-201ENST00000372080 2384 ntAPPRIS P1 TSL 5 BASIC21.02■□□□□ 0.96
MSI1O43347 ADRA1A-203ENST00000380572 1697 ntTSL 1 (best) BASIC21.02■□□□□ 0.95
MSI1O43347 RAP2C-202ENST00000370874 2333 ntAPPRIS P1 TSL 2 BASIC21.01■□□□□ 0.95
MSI1O43347 ZDHHC5-204ENST00000527985 2817 ntTSL 1 (best) BASIC21.01■□□□□ 0.95
MSI1O43347 ZDHHC16-202ENST00000352634 1718 ntAPPRIS ALT1 TSL 1 (best) BASIC21.01■□□□□ 0.95
MSI1O43347 MTFP1-201ENST00000266263 1370 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
MSI1O43347 SLAIN1-206ENST00000418532 2855 ntAPPRIS ALT2 TSL 5 BASIC21.01■□□□□ 0.95
MSI1O43347 BSN-AS2-201ENST00000421598 2603 ntTSL 2 BASIC21.01■□□□□ 0.95
MSI1O43347 OXER1-201ENST00000378661 1781 ntAPPRIS P1 BASIC21.01■□□□□ 0.95
MSI1O43347 MORN1-202ENST00000378529 1500 ntAPPRIS ALT2 TSL 1 (best) BASIC21.01■□□□□ 0.95
MSI1O43347 MOK-233ENST00000524214 1539 ntTSL 2 BASIC21.01■□□□□ 0.95
MSI1O43347 DUSP23-201ENST00000368107 756 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
MSI1O43347 SPESP1-201ENST00000310673 1431 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
MSI1O43347 ITGB1BP1-203ENST00000359712 2126 ntTSL 2 BASIC21.01■□□□□ 0.95
MSI1O43347 MXRA8-201ENST00000309212 2273 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
MSI1O43347 TSSK6-201ENST00000585580 1467 ntAPPRIS P1 BASIC21.01■□□□□ 0.95
MSI1O43347 NDUFAF6-203ENST00000396124 1798 ntAPPRIS P1 TSL 2 BASIC21■□□□□ 0.95
MSI1O43347 NEURL3-202ENST00000435380 1675 ntTSL 1 (best) BASIC21■□□□□ 0.95
MSI1O43347 DISC1-212ENST00000535983 2505 ntAPPRIS ALT2 TSL 1 (best) BASIC21■□□□□ 0.95
MSI1O43347 RNF8-204ENST00000469731 1800 ntTSL 5 BASIC21■□□□□ 0.95
MSI1O43347 MANEAL-202ENST00000373045 2685 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
MSI1O43347 MAL-201ENST00000309988 1112 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
MSI1O43347 AC007285.1-201ENST00000422239 893 ntTSL 5 BASIC21■□□□□ 0.95
MSI1O43347 TPD52L1-207ENST00000527711 999 ntTSL 2 BASIC21■□□□□ 0.95
MSI1O43347 AC027451.1-201ENST00000530667 553 ntTSL 4 BASIC21■□□□□ 0.95
MSI1O43347 C17orf50-201ENST00000603305 569 ntTSL 3 BASIC21■□□□□ 0.95
MSI1O43347 C17orf50-203ENST00000605587 1018 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
MSI1O43347 JADE2-211ENST00000612830 1251 ntTSL 1 (best) BASIC21■□□□□ 0.95
MSI1O43347 MAGIX-206ENST00000615626 1057 ntTSL 1 (best) BASIC21■□□□□ 0.95
MSI1O43347 GNB1-209ENST00000610897 3145 ntAPPRIS P1 TSL 5 BASIC21■□□□□ 0.95
MSI1O43347 PRR7-202ENST00000502922 1345 ntAPPRIS P1 TSL 2 BASIC21■□□□□ 0.95
MSI1O43347 IRF3-221ENST00000598808 1468 ntTSL 5 BASIC21■□□□□ 0.95
MSI1O43347 MFSD10-206ENST00000508221 1639 ntTSL 5 BASIC21■□□□□ 0.95
MSI1O43347 RNH1-202ENST00000356187 1791 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
MSI1O43347 TGFBR1-202ENST00000374994 6516 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
MSI1O43347 SEC11A-201ENST00000268220 1656 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
MSI1O43347 GORAB-201ENST00000367762 1699 ntTSL 1 (best) BASIC20.99■□□□□ 0.95
MSI1O43347 LTBP3-201ENST00000301873 4443 ntAPPRIS ALT2 TSL 2 BASIC20.99■□□□□ 0.95
MSI1O43347 DDX55-205ENST00000538744 1735 ntTSL 5 BASIC20.99■□□□□ 0.95
MSI1O43347 TSSC4-207ENST00000451491 1423 ntAPPRIS P3 TSL 1 (best) BASIC20.99■□□□□ 0.95
MSI1O43347 FBL-201ENST00000221801 1160 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
MSI1O43347 REXO2-201ENST00000265881 1161 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
MSI1O43347 C10orf76-201ENST00000311122 724 ntTSL 1 (best) BASIC20.99■□□□□ 0.95
MSI1O43347 ESRRAP1-201ENST00000400596 1257 ntBASIC20.99■□□□□ 0.95
MSI1O43347 POU5F1P3-201ENST00000428824 1078 ntBASIC20.99■□□□□ 0.95
MSI1O43347 AC092849.2-201ENST00000492523 333 ntTSL 3 BASIC20.99■□□□□ 0.95
MSI1O43347 SOX15-202ENST00000538513 1050 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
MSI1O43347 REXO2-208ENST00000539754 791 ntTSL 2 BASIC20.99■□□□□ 0.95
MSI1O43347 SOX15-203ENST00000570788 1093 ntBASIC20.99■□□□□ 0.95
MSI1O43347 WDSUB1-202ENST00000359774 1912 ntAPPRIS P1 TSL 5 BASIC20.99■□□□□ 0.95
MSI1O43347 ARFRP1-214ENST00000622789 2559 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
MSI1O43347 ATF5-202ENST00000595125 1637 ntAPPRIS P1 TSL 2 BASIC20.99■□□□□ 0.95
MSI1O43347 HAUS4-202ENST00000342454 1474 ntTSL 1 (best) BASIC20.99■□□□□ 0.95
MSI1O43347 PKM-215ENST00000565154 2004 ntAPPRIS ALT1 TSL 2 BASIC20.99■□□□□ 0.95
MSI1O43347 RGMA-210ENST00000557301 1929 ntAPPRIS ALT2 TSL 2 BASIC20.98■□□□□ 0.95
MSI1O43347 MZB1-201ENST00000302125 825 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
MSI1O43347 EGFL7-202ENST00000371698 1282 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
MSI1O43347 OGG1-209ENST00000383826 1069 ntTSL 5 BASIC20.98■□□□□ 0.95
MSI1O43347 LCN6-203ENST00000476567 1015 ntTSL 1 (best) BASIC20.98■□□□□ 0.95
MSI1O43347 MCRIP1-203ENST00000538396 925 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
MSI1O43347 TTLL7-214ENST00000610996 2028 ntTSL 5 BASIC20.98■□□□□ 0.95
MSI1O43347 AC092720.2-201ENST00000602388 1665 ntBASIC20.98■□□□□ 0.95
MSI1O43347 ODC1-202ENST00000405333 1943 ntAPPRIS P1 TSL 2 BASIC20.98■□□□□ 0.95
MSI1O43347 DCK-201ENST00000286648 2716 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
MSI1O43347 VEGFA-204ENST00000372064 2909 ntTSL 1 (best) BASIC20.98■□□□□ 0.95
MSI1O43347 SLC25A46-202ENST00000447245 1575 ntTSL 2 BASIC20.97■□□□□ 0.95
MSI1O43347 FAM129C-212ENST00000601861 2180 ntAPPRIS ALT2 TSL 2 BASIC20.97■□□□□ 0.95
MSI1O43347 EPN1-201ENST00000085079 2355 ntTSL 1 (best) BASIC20.97■□□□□ 0.95
MSI1O43347 DNAJB5-203ENST00000453597 2589 ntTSL 2 BASIC20.97■□□□□ 0.95
MSI1O43347 TMEM62-201ENST00000260403 2771 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
MSI1O43347 MTMR9LP-202ENST00000423995 1878 ntTSL 2 BASIC20.97■□□□□ 0.95
MSI1O43347 AC005224.2-201ENST00000571192 1885 ntTSL 2 BASIC20.97■□□□□ 0.95
MSI1O43347 FBXO31-207ENST00000618298 1871 ntTSL 5 BASIC20.97■□□□□ 0.95
MSI1O43347 TACC3-213ENST00000617535 1693 ntTSL 5 BASIC20.97■□□□□ 0.95
MSI1O43347 NUTF2-201ENST00000219169 2321 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
MSI1O43347 WDR25-201ENST00000335290 2123 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
MSI1O43347 RNF5-203ENST00000375094 1168 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
MSI1O43347 OTUB1-203ENST00000428192 1296 ntAPPRIS P2 TSL 2 BASIC20.97■□□□□ 0.95
MSI1O43347 SERTAD4-AS1-201ENST00000437764 726 ntTSL 1 (best) BASIC20.97■□□□□ 0.95
MSI1O43347 FAM201B-201ENST00000458407 597 ntBASIC20.97■□□□□ 0.95
MSI1O43347 SCARA5-203ENST00000518030 1074 ntTSL 1 (best) BASIC20.97■□□□□ 0.95
MSI1O43347 AP003097.1-201ENST00000530657 1135 ntBASIC20.97■□□□□ 0.95
MSI1O43347 MMAB-206ENST00000540016 945 ntTSL 3 BASIC20.97■□□□□ 0.95
MSI1O43347 FAM32A-205ENST00000589852 1168 ntTSL 1 (best) BASIC20.97■□□□□ 0.95
MSI1O43347 AC006557.6-201ENST00000623071 864 ntBASIC20.97■□□□□ 0.95
MSI1O43347 TTC7A-201ENST00000319190 5157 ntAPPRIS P1 TSL 2 BASIC20.97■□□□□ 0.95
MSI1O43347 PTPRJ-208ENST00000615445 4773 ntAPPRIS ALT2 TSL 5 BASIC20.97■□□□□ 0.95
MSI1O43347 ATAD3A-202ENST00000378755 2612 ntTSL 2 BASIC20.97■□□□□ 0.95
MSI1O43347 H19-201ENST00000411754 1788 ntTSL 5 BASIC20.97■□□□□ 0.95
MSI1O43347 NDRG2-242ENST00000555158 2216 ntAPPRIS ALT1 TSL 1 (best) BASIC20.97■□□□□ 0.95
MSI1O43347 FOXI1-202ENST00000449804 2011 ntTSL 1 (best) BASIC20.97■□□□□ 0.95
MSI1O43347 NISCH-201ENST00000345716 5238 ntAPPRIS P3 TSL 1 (best) BASIC20.97■□□□□ 0.95
MSI1O43347 TSPAN14-203ENST00000372156 1380 ntAPPRIS P1 TSL 5 BASIC20.97■□□□□ 0.95
MSI1O43347 ZNF513-202ENST00000407879 2077 ntTSL 1 (best) BASIC20.97■□□□□ 0.95
MSI1O43347 GLG1-214ENST00000627032 2147 ntTSL 5 BASIC20.96■□□□□ 0.95
MSI1O43347 ABHD1-201ENST00000316470 1400 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
Retrieved 100 of 98,524 protein–RNA pairs in 27 ms