Protein–RNA interactions for Protein: O15467

CCL16, C-C motif chemokine 16, humanhuman

Predictions only

Length 120 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCL16O15467 AC068831.2-201ENST00000448987 367 ntTSL 2 BASIC21.17■□□□□ 0.98
CCL16O15467 STXBP1-203ENST00000476182 566 ntTSL 5 BASIC21.17■□□□□ 0.98
CCL16O15467 SNX5-213ENST00000486039 602 ntTSL 1 (best) BASIC21.17■□□□□ 0.98
CCL16O15467 AC023632.3-201ENST00000521633 145 ntBASIC21.17■□□□□ 0.98
CCL16O15467 AC015712.2-203ENST00000560461 688 ntTSL 3 BASIC21.17■□□□□ 0.98
CCL16O15467 CDKN2A-213ENST00000579122 666 ntTSL 3 BASIC21.17■□□□□ 0.98
CCL16O15467 UBL5-202ENST00000586895 432 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
CCL16O15467 DCAKD-205ENST00000588499 990 ntAPPRIS P1 TSL 2 BASIC21.17■□□□□ 0.98
CCL16O15467 AC020922.2-201ENST00000596786 359 ntTSL 4 BASIC21.17■□□□□ 0.98
CCL16O15467 AC020913.2-201ENST00000601929 629 ntTSL 5 BASIC21.17■□□□□ 0.98
CCL16O15467 NPAS1-207ENST00000602189 1643 ntTSL 5 BASIC21.17■□□□□ 0.98
CCL16O15467 TRIM67-203ENST00000449018 2166 ntTSL 1 (best) BASIC21.17■□□□□ 0.98
CCL16O15467 PDXK-205ENST00000398081 2251 ntTSL 2 BASIC21.17■□□□□ 0.98
CCL16O15467 UBTF-213ENST00000533177 3011 ntTSL 5 BASIC21.17■□□□□ 0.98
CCL16O15467 ANKLE2-201ENST00000357997 4646 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
CCL16O15467 P4HTM-202ENST00000383729 2127 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
CCL16O15467 LRCH4-209ENST00000497245 2014 ntTSL 5 BASIC21.16■□□□□ 0.98
CCL16O15467 BEST2-204ENST00000553030 2000 ntAPPRIS P1 TSL 5 BASIC21.16■□□□□ 0.98
CCL16O15467 CHRDL2-203ENST00000376332 1867 ntAPPRIS ALT2 TSL 1 (best) BASIC21.16■□□□□ 0.98
CCL16O15467 VCPKMT-202ENST00000395860 1761 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
CCL16O15467 CASP6-201ENST00000265164 1548 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
CCL16O15467 RPP25L-201ENST00000297613 1092 ntAPPRIS P1 TSL 2 BASIC21.16■□□□□ 0.98
CCL16O15467 DDR1-228ENST00000376575 732 ntTSL 1 (best) BASIC21.16■□□□□ 0.98
CCL16O15467 HDAC11-203ENST00000402271 1018 ntTSL 3 BASIC21.16■□□□□ 0.98
CCL16O15467 HAGLROS-201ENST00000426615 1121 ntTSL 2 BASIC21.16■□□□□ 0.98
CCL16O15467 AC108025.1-201ENST00000453678 1058 ntTSL 5 BASIC21.16■□□□□ 0.98
CCL16O15467 AL355075.4-201ENST00000554988 638 ntBASIC21.16■□□□□ 0.98
CCL16O15467 CBLN3-202ENST00000555436 718 ntTSL 3 BASIC21.16■□□□□ 0.98
CCL16O15467 C17orf62-238ENST00000585064 1074 ntAPPRIS P1 TSL 2 BASIC21.16■□□□□ 0.98
CCL16O15467 AC018445.1-201ENST00000621571 568 ntTSL 4 BASIC21.16■□□□□ 0.98
CCL16O15467 TRIM28-202ENST00000341753 2709 ntTSL 1 (best) BASIC21.16■□□□□ 0.98
CCL16O15467 ARMC10-202ENST00000323716 2635 ntTSL 1 (best) BASIC21.16■□□□□ 0.98
CCL16O15467 RHOT1-205ENST00000545287 2516 ntAPPRIS P4 TSL 5 BASIC21.16■□□□□ 0.98
CCL16O15467 AL117328.2-201ENST00000624617 1940 ntBASIC21.16■□□□□ 0.98
CCL16O15467 AUTS2-203ENST00000406775 5950 ntAPPRIS ALT2 TSL 1 (best) BASIC21.15■□□□□ 0.98
CCL16O15467 PARD3-213ENST00000545260 5740 ntAPPRIS ALT2 TSL 1 (best) BASIC21.15■□□□□ 0.98
CCL16O15467 MTFP1-201ENST00000266263 1370 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
CCL16O15467 RBP4-202ENST00000371467 1314 ntAPPRIS P1 TSL 5 BASIC21.15■□□□□ 0.98
CCL16O15467 ESPN-202ENST00000416731 1338 ntTSL 5 BASIC21.15■□□□□ 0.98
CCL16O15467 ANG-201ENST00000336811 1222 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
CCL16O15467 HYAL3-203ENST00000415204 959 ntTSL 1 (best) BASIC21.15■□□□□ 0.98
CCL16O15467 KRT18P21-201ENST00000515767 1272 ntBASIC21.15■□□□□ 0.98
CCL16O15467 AC068987.1-201ENST00000562996 427 ntTSL 3 BASIC21.15■□□□□ 0.98
CCL16O15467 GOSR2-208ENST00000573224 1115 ntTSL 5 BASIC21.15■□□□□ 0.98
CCL16O15467 AC007786.1-201ENST00000587859 709 ntTSL 2 BASIC21.15■□□□□ 0.98
CCL16O15467 AL121829.2-201ENST00000620908 328 ntBASIC21.15■□□□□ 0.98
CCL16O15467 AC133561.5-201ENST00000635547 218 ntBASIC21.15■□□□□ 0.98
CCL16O15467 ITGB1BP1-202ENST00000355346 1963 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
CCL16O15467 INTS12-206ENST00000451321 1975 ntTSL 1 (best) BASIC21.15■□□□□ 0.98
CCL16O15467 SQLE-206ENST00000523430 1879 ntTSL 2 BASIC21.15■□□□□ 0.98
CCL16O15467 AL024507.2-201ENST00000606070 2574 ntBASIC21.15■□□□□ 0.98
CCL16O15467 SPTBN4-203ENST00000392023 2419 ntTSL 1 (best) BASIC21.15■□□□□ 0.98
CCL16O15467 SUMF2-204ENST00000395436 1683 ntAPPRIS ALT2 TSL 1 (best) BASIC21.15■□□□□ 0.98
CCL16O15467 NOTUM-201ENST00000409678 2329 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
CCL16O15467 GPR162-203ENST00000428545 1610 ntTSL 1 (best) BASIC21.15■□□□□ 0.98
CCL16O15467 TTYH1-201ENST00000301194 2088 ntAPPRIS ALT1 TSL 1 (best) BASIC21.14■□□□□ 0.98
CCL16O15467 CNTFR-202ENST00000378980 2052 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.98
CCL16O15467 RBKS-201ENST00000302188 1973 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.98
CCL16O15467 PCDHB12-203ENST00000624949 1963 ntTSL 2 BASIC21.14■□□□□ 0.98
CCL16O15467 PTGER3-204ENST00000356595 1943 ntAPPRIS P4 TSL 1 (best) BASIC21.14■□□□□ 0.98
CCL16O15467 PTGER3-207ENST00000370931 1914 ntAPPRIS ALT2 TSL 1 (best) BASIC21.14■□□□□ 0.98
CCL16O15467 TMEM51-201ENST00000376008 1931 ntAPPRIS P1 TSL 2 BASIC21.14■□□□□ 0.98
CCL16O15467 RAX-201ENST00000256852 2935 ntTSL 1 (best) BASIC21.14■□□□□ 0.97
CCL16O15467 CAPN12-212ENST00000601953 2381 ntTSL 5 BASIC21.14■□□□□ 0.97
CCL16O15467 ZNF282-203ENST00000479907 1815 ntTSL 2 BASIC21.14■□□□□ 0.97
CCL16O15467 PTGER3-212ENST00000628037 1815 ntAPPRIS ALT2 TSL 1 (best) BASIC21.14■□□□□ 0.97
CCL16O15467 KHDRBS2-201ENST00000281156 2332 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.97
CCL16O15467 CTAG2-201ENST00000247306 993 ntTSL 1 (best) BASIC21.14■□□□□ 0.97
CCL16O15467 MRPS24-201ENST00000317534 707 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.97
CCL16O15467 PLEKHB2-203ENST00000404460 1167 ntTSL 2 BASIC21.14■□□□□ 0.97
CCL16O15467 MIR1224-201ENST00000408193 85 ntBASIC21.14■□□□□ 0.97
CCL16O15467 KRT8P12-201ENST00000468527 998 ntTSL 2 BASIC21.14■□□□□ 0.97
CCL16O15467 SBF2-AS1-202ENST00000499953 854 ntTSL 5 BASIC21.14■□□□□ 0.97
CCL16O15467 NDUFA13-203ENST00000503283 825 ntTSL 2 BASIC21.14■□□□□ 0.97
CCL16O15467 AC010531.1-201ENST00000568879 953 ntAPPRIS P1 TSL 4 BASIC21.14■□□□□ 0.97
CCL16O15467 RNH1-202ENST00000356187 1791 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.97
CCL16O15467 GABBR2-201ENST00000259455 5788 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.97
CCL16O15467 DPYS-201ENST00000351513 2127 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.97
CCL16O15467 NXNL2-202ENST00000375855 1457 ntTSL 1 (best) BASIC21.13■□□□□ 0.97
CCL16O15467 CDR2-201ENST00000268383 2702 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
CCL16O15467 OTOP1-201ENST00000296358 1864 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
CCL16O15467 LMAN1L-201ENST00000309664 1873 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
CCL16O15467 TTYH1-202ENST00000376530 1885 ntAPPRIS P3 TSL 1 (best) BASIC21.13■□□□□ 0.97
CCL16O15467 TERF2-201ENST00000254942 2983 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
CCL16O15467 ROPN1-209ENST00000495093 1376 ntTSL 1 (best) BASIC21.13■□□□□ 0.97
CCL16O15467 FBXL12-205ENST00000586651 1736 ntTSL 1 (best) BASIC21.13■□□□□ 0.97
CCL16O15467 DTNB-211ENST00000407661 2420 ntAPPRIS ALT1 TSL 1 (best) BASIC21.13■□□□□ 0.97
CCL16O15467 LMLN-210ENST00000482695 2010 ntAPPRIS ALT2 TSL 1 (best) BASIC21.13■□□□□ 0.97
CCL16O15467 PTPRCAP-201ENST00000326294 1292 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
CCL16O15467 AC087499.1-201ENST00000418141 1075 ntBASIC21.13■□□□□ 0.97
CCL16O15467 BX322234.1-201ENST00000444188 980 ntTSL 3 BASIC21.13■□□□□ 0.97
CCL16O15467 LINC00894-209ENST00000458274 547 ntTSL 2 BASIC21.13■□□□□ 0.97
CCL16O15467 AC026412.1-201ENST00000507290 1033 ntTSL 1 (best) BASIC21.13■□□□□ 0.97
CCL16O15467 AC019257.1-201ENST00000517676 557 ntTSL 5 BASIC21.13■□□□□ 0.97
CCL16O15467 AC134349.1-201ENST00000543969 385 ntTSL 3 BASIC21.13■□□□□ 0.97
CCL16O15467 RPL17-204ENST00000579248 790 ntAPPRIS P1 TSL 2 BASIC21.13■□□□□ 0.97
CCL16O15467 MAEA-213ENST00000510794 1607 ntTSL 2 BASIC21.13■□□□□ 0.97
CCL16O15467 EPS8L2-230ENST00000610855 1633 ntTSL 5 BASIC21.13■□□□□ 0.97
CCL16O15467 P4HA2-202ENST00000360568 2313 ntAPPRIS ALT1 TSL 1 (best) BASIC21.13■□□□□ 0.97
CCL16O15467 HNRNPLL-204ENST00000409328 1908 ntTSL 1 (best) BASIC21.13■□□□□ 0.97
Retrieved 100 of 98,524 protein–RNA pairs in 26 ms