Protein–RNA interactions for Protein: O15178

T, Brachyury protein, humanhuman

Predictions only

Length 435 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TO15178 ARHGDIA-201ENST00000269321 1906 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
TO15178 CIZ1-206ENST00000372954 2731 ntAPPRIS ALT2 TSL 1 (best) BASIC18.63■□□□□ 0.57
TO15178 ADRA1B-201ENST00000306675 2047 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
TO15178 CSF1-205ENST00000420111 1083 ntTSL 5 BASIC18.63■□□□□ 0.57
TO15178 EIF4E3-203ENST00000421769 777 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
TO15178 AC011611.3-201ENST00000552367 569 ntTSL 4 BASIC18.63■□□□□ 0.57
TO15178 SUN1-220ENST00000457378 1309 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
TO15178 C12orf42-208ENST00000548883 1336 ntAPPRIS P2 TSL 1 (best) BASIC18.63■□□□□ 0.57
TO15178 RFXANK-201ENST00000303088 1407 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
TO15178 TSSK6-201ENST00000585580 1467 ntAPPRIS P1 BASIC18.63■□□□□ 0.57
TO15178 TRIB3-201ENST00000217233 2499 ntAPPRIS P3 TSL 1 (best) BASIC18.63■□□□□ 0.57
TO15178 FAM76A-205ENST00000419687 1661 ntTSL 2 BASIC18.63■□□□□ 0.57
TO15178 TACC3-213ENST00000617535 1693 ntTSL 5 BASIC18.63■□□□□ 0.57
TO15178 TNFRSF14-201ENST00000355716 1707 ntAPPRIS P2 TSL 1 (best) BASIC18.63■□□□□ 0.57
TO15178 ARHGEF7-202ENST00000317133 4361 ntAPPRIS ALT2 TSL 1 (best) BASIC18.63■□□□□ 0.57
TO15178 TMEM161A-202ENST00000450333 1930 ntTSL 2 BASIC18.62■□□□□ 0.57
TO15178 SNUPN-205ENST00000564644 1931 ntAPPRIS P1 TSL 2 BASIC18.62■□□□□ 0.57
TO15178 SMG1P5-201ENST00000411546 2362 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
TO15178 RELA-201ENST00000308639 2681 ntAPPRIS ALT1 TSL 1 (best) BASIC18.62■□□□□ 0.57
TO15178 MDK-204ENST00000395569 686 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
TO15178 IDH1-AS1-202ENST00000448588 489 ntTSL 3 BASIC18.62■□□□□ 0.57
TO15178 AC092143.2-201ENST00000554623 985 ntTSL 3 BASIC18.62■□□□□ 0.57
TO15178 AC090527.2-201ENST00000564080 1060 ntAPPRIS P1 TSL 3 BASIC18.62■□□□□ 0.57
TO15178 AC003102.1-201ENST00000588279 569 ntTSL 4 BASIC18.62■□□□□ 0.57
TO15178 AC083880.1-201ENST00000608266 535 ntBASIC18.62■□□□□ 0.57
TO15178 AL160396.2-202ENST00000636692 566 ntAPPRIS ALT2 TSL 5 BASIC18.62■□□□□ 0.57
TO15178 SPESP1-201ENST00000310673 1431 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
TO15178 SPATA22-210ENST00000573128 1704 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
TO15178 AC005224.2-201ENST00000571192 1885 ntTSL 2 BASIC18.62■□□□□ 0.57
TO15178 CHRNA3-202ENST00000348639 2030 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
TO15178 IL17RC-205ENST00000413608 2147 ntAPPRIS ALT2 TSL 1 (best) BASIC18.62■□□□□ 0.57
TO15178 FAM129C-212ENST00000601861 2180 ntAPPRIS ALT2 TSL 2 BASIC18.62■□□□□ 0.57
TO15178 KCNS3-201ENST00000304101 2333 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
TO15178 ITGBL1-206ENST00000618057 2368 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
TO15178 NCKAP1-201ENST00000360982 4989 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
TO15178 GPSM1-206ENST00000616132 2270 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
TO15178 ZNF331-202ENST00000411977 2248 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
TO15178 CYP1B1-207ENST00000614273 2174 ntAPPRIS P1 TSL 5 BASIC18.61■□□□□ 0.57
TO15178 FOXI1-202ENST00000449804 2011 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
TO15178 AVPR2-202ENST00000358927 1763 ntAPPRIS P1 TSL 5 BASIC18.61■□□□□ 0.57
TO15178 MIF-AS1-201ENST00000406213 1476 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
TO15178 WDR37-203ENST00000381329 1307 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
TO15178 PSPN-201ENST00000245810 471 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
TO15178 MZB1-201ENST00000302125 825 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
TO15178 RPS14-201ENST00000312037 711 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
TO15178 TRAPPC5-201ENST00000317378 790 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
TO15178 CYYR1-202ENST00000400043 735 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
TO15178 CT47A12-201ENST00000419982 1165 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
TO15178 AL356020.1-201ENST00000554235 1076 ntTSL 5 BASIC18.61■□□□□ 0.57
TO15178 MMP25-AS1-204ENST00000572574 794 ntTSL 5 BASIC18.61■□□□□ 0.57
TO15178 NXN-201ENST00000336868 3036 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
TO15178 PATZ1-201ENST00000215919 2516 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
TO15178 MAP7-206ENST00000611373 2317 ntAPPRIS ALT2 TSL 5 BASIC18.61■□□□□ 0.57
TO15178 RHNO1-204ENST00000489288 1870 ntAPPRIS P3 TSL 1 (best) BASIC18.6■□□□□ 0.57
TO15178 ESYT2-201ENST00000251527 5960 ntAPPRIS P2 TSL 1 (best) BASIC18.6■□□□□ 0.57
TO15178 PTBP1P-201ENST00000554374 1601 ntBASIC18.6■□□□□ 0.57
TO15178 RSPO1-201ENST00000356545 2621 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
TO15178 NFIX-205ENST00000585575 1485 ntAPPRIS P1 TSL 5 BASIC18.6■□□□□ 0.57
TO15178 SLC35A3-208ENST00000638336 2438 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
TO15178 RIPPLY3-201ENST00000329553 2235 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
TO15178 TCP11-202ENST00000311875 2166 ntAPPRIS ALT2 TSL 1 (best) BASIC18.6■□□□□ 0.57
TO15178 CNIH4-203ENST00000366858 702 ntTSL 3 BASIC18.6■□□□□ 0.57
TO15178 AC023632.3-201ENST00000521633 145 ntBASIC18.6■□□□□ 0.57
TO15178 AC006435.1-201ENST00000571775 1065 ntTSL 5 BASIC18.6■□□□□ 0.57
TO15178 C17orf67-201ENST00000397861 2013 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
TO15178 MGAT4B-201ENST00000292591 2446 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
TO15178 RASSF7-204ENST00000431809 1745 ntAPPRIS ALT2 TSL 5 BASIC18.6■□□□□ 0.57
TO15178 RNH1-206ENST00000438658 1725 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
TO15178 DPP3P2-201ENST00000416030 1696 ntBASIC18.6■□□□□ 0.57
TO15178 DET1-207ENST00000564406 2315 ntTSL 2 BASIC18.6■□□□□ 0.57
TO15178 ACHE-207ENST00000428317 2159 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
TO15178 DUSP5-201ENST00000369583 2557 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
TO15178 SDK1-201ENST00000389531 7606 ntAPPRIS ALT2 TSL 5 BASIC18.59■□□□□ 0.57
TO15178 KCNMB4-201ENST00000258111 4731 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
TO15178 PABPC4-204ENST00000372862 2470 ntTSL 5 BASIC18.59■□□□□ 0.57
TO15178 CRK-204ENST00000574295 1391 ntTSL 5 BASIC18.59■□□□□ 0.57
TO15178 SPON2-201ENST00000290902 1869 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
TO15178 PHB2-201ENST00000399433 1308 ntAPPRIS ALT1 TSL 2 BASIC18.59■□□□□ 0.57
TO15178 PILRB-207ENST00000448382 2314 ntTSL 2 BASIC18.59■□□□□ 0.57
TO15178 NENF-201ENST00000366988 949 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
TO15178 OTUB1-203ENST00000428192 1296 ntAPPRIS P2 TSL 2 BASIC18.59■□□□□ 0.57
TO15178 ME3-202ENST00000393324 2240 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
TO15178 FBLN5-202ENST00000342058 2123 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
TO15178 KREMEN2-202ENST00000319500 1882 ntAPPRIS ALT2 TSL 1 (best) BASIC18.58■□□□□ 0.57
TO15178 TSSC4-207ENST00000451491 1423 ntAPPRIS P3 TSL 1 (best) BASIC18.58■□□□□ 0.57
TO15178 NTN5-201ENST00000270235 1836 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.57
TO15178 WASH6P-203ENST00000460206 1826 ntTSL 5 BASIC18.58■□□□□ 0.57
TO15178 H19-201ENST00000411754 1788 ntTSL 5 BASIC18.58■□□□□ 0.57
TO15178 SLC16A3-201ENST00000392339 2074 ntAPPRIS P1 TSL 5 BASIC18.58■□□□□ 0.57
TO15178 SLC16A3-202ENST00000392341 2086 ntAPPRIS P1 TSL 5 BASIC18.58■□□□□ 0.57
TO15178 TTLL7-214ENST00000610996 2028 ntTSL 5 BASIC18.58■□□□□ 0.56
TO15178 MFF-205ENST00000354503 1085 ntTSL 2 BASIC18.58■□□□□ 0.56
TO15178 SPATA25-201ENST00000372519 757 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
TO15178 APTR-205ENST00000447009 902 ntTSL 2 BASIC18.58■□□□□ 0.56
TO15178 GATS-209ENST00000454084 1030 ntTSL 3 BASIC18.58■□□□□ 0.56
TO15178 SERP1-205ENST00000487153 657 ntTSL 4 BASIC18.58■□□□□ 0.56
TO15178 C17orf107-202ENST00000521575 1275 ntAPPRIS ALT2 TSL 1 (best) BASIC18.58■□□□□ 0.56
TO15178 ASGR1-204ENST00000572879 797 ntTSL 5 BASIC18.58■□□□□ 0.56
TO15178 HLA-B-256ENST00000639848 1089 ntBASIC18.58■□□□□ 0.56
TO15178 SNRPA-201ENST00000243563 1621 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
Retrieved 100 of 98,524 protein–RNA pairs in 51.6 ms