Protein–RNA interactions for Protein: A2A3K4

PTPDC1, Protein tyrosine phosphatase domain-containing protein 1, humanhuman

Predictions only

Length 754 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PTPDC1A2A3K4 MFSD7-204ENST00000503156 1632 ntAPPRIS ALT2 TSL 5 BASIC23.81■■□□□ 1.4
PTPDC1A2A3K4 TMEM51-201ENST00000376008 1931 ntAPPRIS P1 TSL 2 BASIC23.8■■□□□ 1.4
PTPDC1A2A3K4 ADAP1-218ENST00000617043 1946 ntTSL 2 BASIC23.8■■□□□ 1.4
PTPDC1A2A3K4 PKMYT1-204ENST00000440027 2061 ntTSL 2 BASIC23.8■■□□□ 1.4
PTPDC1A2A3K4 SLC25A39-212ENST00000590194 1542 ntAPPRIS P3 TSL 5 BASIC23.8■■□□□ 1.4
PTPDC1A2A3K4 CDH5-202ENST00000539168 1672 ntTSL 2 BASIC23.8■■□□□ 1.4
PTPDC1A2A3K4 AC092720.2-201ENST00000602388 1665 ntBASIC23.8■■□□□ 1.4
PTPDC1A2A3K4 GFI1-202ENST00000370332 2855 ntAPPRIS P1 TSL 1 (best) BASIC23.8■■□□□ 1.4
PTPDC1A2A3K4 UBE2F-201ENST00000272930 2009 ntAPPRIS P1 TSL 1 (best) BASIC23.8■■□□□ 1.4
PTPDC1A2A3K4 LMAN1L-201ENST00000309664 1873 ntAPPRIS P1 TSL 1 (best) BASIC23.8■■□□□ 1.4
PTPDC1A2A3K4 IFI6-202ENST00000361157 841 ntAPPRIS ALT2 TSL 1 (best) BASIC23.8■■□□□ 1.4
PTPDC1A2A3K4 CD99P1-203ENST00000431582 602 ntTSL 4 BASIC23.8■■□□□ 1.4
PTPDC1A2A3K4 ELOVL2-AS1-201ENST00000456190 737 ntTSL 3 BASIC23.8■■□□□ 1.4
PTPDC1A2A3K4 AC138028.5-201ENST00000566114 558 ntTSL 5 BASIC23.8■■□□□ 1.4
PTPDC1A2A3K4 FAM21FP-204ENST00000608637 956 ntBASIC23.8■■□□□ 1.4
PTPDC1A2A3K4 TARDBP-228ENST00000629725 1031 ntTSL 5 BASIC23.8■■□□□ 1.4
PTPDC1A2A3K4 CMTM4-201ENST00000330687 3414 ntTSL 1 (best) BASIC23.8■■□□□ 1.4
PTPDC1A2A3K4 HOMEZ-201ENST00000357460 4971 ntAPPRIS P2 TSL 1 (best) BASIC23.8■■□□□ 1.4
PTPDC1A2A3K4 AVPR2-202ENST00000358927 1763 ntAPPRIS P1 TSL 5 BASIC23.8■■□□□ 1.4
PTPDC1A2A3K4 AL162377.1-201ENST00000618844 1793 ntBASIC23.8■■□□□ 1.4
PTPDC1A2A3K4 FAM66B-202ENST00000606573 2630 ntTSL 1 (best) BASIC23.8■■□□□ 1.4
PTPDC1A2A3K4 FUBP3-201ENST00000319725 3124 ntAPPRIS P1 TSL 1 (best) BASIC23.79■■□□□ 1.4
PTPDC1A2A3K4 TSSC4-203ENST00000380996 1544 ntAPPRIS ALT2 TSL 1 (best) BASIC23.79■■□□□ 1.4
PTPDC1A2A3K4 BRD4-202ENST00000360016 3240 ntAPPRIS ALT2 TSL 1 (best) BASIC23.79■■□□□ 1.4
PTPDC1A2A3K4 GPAA1-201ENST00000355091 2078 ntAPPRIS P1 TSL 1 (best) BASIC23.79■■□□□ 1.4
PTPDC1A2A3K4 TRPV6-209ENST00000638686 2298 ntAPPRIS P2 TSL 1 (best) BASIC23.79■■□□□ 1.4
PTPDC1A2A3K4 CYP26A1-201ENST00000224356 2125 ntAPPRIS P1 TSL 1 (best) BASIC23.79■■□□□ 1.4
PTPDC1A2A3K4 GNA15-201ENST00000262958 2133 ntAPPRIS P1 TSL 1 (best) BASIC23.79■■□□□ 1.4
PTPDC1A2A3K4 SAPCD2P1-201ENST00000395413 1184 ntBASIC23.79■■□□□ 1.4
PTPDC1A2A3K4 ALG5-202ENST00000443765 1119 ntTSL 2 BASIC23.79■■□□□ 1.4
PTPDC1A2A3K4 AC097658.1-201ENST00000475555 843 ntBASIC23.79■■□□□ 1.4
PTPDC1A2A3K4 CTBP1-AS2-203ENST00000507044 739 ntTSL 3 BASIC23.79■■□□□ 1.4
PTPDC1A2A3K4 BET1L-207ENST00000529614 560 ntTSL 5 BASIC23.79■■□□□ 1.4
PTPDC1A2A3K4 SAE1-203ENST00000413379 2313 ntTSL 2 BASIC23.79■■□□□ 1.4
PTPDC1A2A3K4 LBX2-203ENST00000460508 1452 ntTSL 1 (best) BASIC23.79■■□□□ 1.4
PTPDC1A2A3K4 PGPEP1L-202ENST00000535714 1483 ntTSL 2 BASIC23.79■■□□□ 1.4
PTPDC1A2A3K4 XBP1-203ENST00000403532 1824 ntAPPRIS ALT1 TSL 3 BASIC23.79■■□□□ 1.4
PTPDC1A2A3K4 OGG1-202ENST00000302008 2191 ntAPPRIS ALT2 TSL 5 BASIC23.79■■□□□ 1.4
PTPDC1A2A3K4 ACHE-207ENST00000428317 2159 ntAPPRIS P1 TSL 1 (best) BASIC23.79■■□□□ 1.4
PTPDC1A2A3K4 RAB5A-201ENST00000273047 2536 ntAPPRIS P1 TSL 1 (best) BASIC23.78■■□□□ 1.4
PTPDC1A2A3K4 PTPRJ-208ENST00000615445 4773 ntAPPRIS ALT2 TSL 5 BASIC23.78■■□□□ 1.4
PTPDC1A2A3K4 MEF2B-203ENST00000410050 1429 ntTSL 5 BASIC23.78■■□□□ 1.4
PTPDC1A2A3K4 PHOSPHO1-201ENST00000310544 1816 ntAPPRIS P1 TSL 2 BASIC23.78■■□□□ 1.4
PTPDC1A2A3K4 RIPPLY3-201ENST00000329553 2235 ntAPPRIS P1 TSL 1 (best) BASIC23.78■■□□□ 1.4
PTPDC1A2A3K4 P4HB-201ENST00000331483 2603 ntAPPRIS P1 TSL 1 (best) BASIC23.78■■□□□ 1.4
PTPDC1A2A3K4 ATAD3A-202ENST00000378755 2612 ntTSL 2 BASIC23.78■■□□□ 1.4
PTPDC1A2A3K4 ART5-202ENST00000397067 1154 ntTSL 1 (best) BASIC23.78■■□□□ 1.4
PTPDC1A2A3K4 AL355472.2-201ENST00000422958 438 ntBASIC23.78■■□□□ 1.4
PTPDC1A2A3K4 DUSP5P2-201ENST00000426873 1033 ntBASIC23.78■■□□□ 1.4
PTPDC1A2A3K4 AKAIN1-201ENST00000434239 575 ntAPPRIS P1 TSL 2 BASIC23.78■■□□□ 1.4
PTPDC1A2A3K4 FAM201B-201ENST00000458407 597 ntBASIC23.78■■□□□ 1.4
PTPDC1A2A3K4 RHEB-204ENST00000472642 900 ntTSL 3 BASIC23.78■■□□□ 1.4
PTPDC1A2A3K4 AC091874.3-201ENST00000512672 1195 ntBASIC23.78■■□□□ 1.4
PTPDC1A2A3K4 ZNF324-202ENST00000535298 1006 ntTSL 5 BASIC23.78■■□□□ 1.4
PTPDC1A2A3K4 PLEKHJ1-205ENST00000587394 937 ntTSL 2 BASIC23.78■■□□□ 1.4
PTPDC1A2A3K4 AC083880.1-201ENST00000608266 535 ntBASIC23.78■■□□□ 1.4
PTPDC1A2A3K4 HDDC3-202ENST00000394272 1880 ntAPPRIS P1 TSL 2 BASIC23.78■■□□□ 1.4
PTPDC1A2A3K4 OGG1-205ENST00000344629 1744 ntAPPRIS ALT2 TSL 1 (best) BASIC23.78■■□□□ 1.4
PTPDC1A2A3K4 FLT1-204ENST00000541932 2969 ntTSL 1 (best) BASIC23.78■■□□□ 1.4
PTPDC1A2A3K4 TTC7A-201ENST00000319190 5157 ntAPPRIS P1 TSL 2 BASIC23.78■■□□□ 1.4
PTPDC1A2A3K4 ME2-202ENST00000382927 2492 ntTSL 1 (best) BASIC23.77■■□□□ 1.4
PTPDC1A2A3K4 PLSCR3-213ENST00000576362 1605 ntTSL 3 BASIC23.77■■□□□ 1.4
PTPDC1A2A3K4 FBXW7-202ENST00000281708 4976 ntAPPRIS P4 TSL 1 (best) BASIC23.77■■□□□ 1.4
PTPDC1A2A3K4 GORAB-201ENST00000367762 1699 ntTSL 1 (best) BASIC23.77■■□□□ 1.4
PTPDC1A2A3K4 NRG2-204ENST00000358522 2559 ntAPPRIS P5 TSL 1 (best) BASIC23.77■■□□□ 1.4
PTPDC1A2A3K4 FITM1-201ENST00000267426 1194 ntAPPRIS P1 TSL 1 (best) BASIC23.77■■□□□ 1.4
PTPDC1A2A3K4 NUDT8-202ENST00000376693 728 ntAPPRIS ALT2 TSL 2 BASIC23.77■■□□□ 1.4
PTPDC1A2A3K4 FAM229A-204ENST00000432622 699 ntAPPRIS P2 TSL 2 BASIC23.77■■□□□ 1.4
PTPDC1A2A3K4 ANKRD65-202ENST00000442470 876 ntTSL 2 BASIC23.77■■□□□ 1.4
PTPDC1A2A3K4 LIMD2-206ENST00000578993 602 ntTSL 3 BASIC23.77■■□□□ 1.4
PTPDC1A2A3K4 AC016588.1-201ENST00000591533 542 ntTSL 4 BASIC23.77■■□□□ 1.4
PTPDC1A2A3K4 MYC-209ENST00000641252 345 ntBASIC23.77■■□□□ 1.4
PTPDC1A2A3K4 FDXR-204ENST00000442102 1967 ntTSL 2 BASIC23.77■■□□□ 1.4
PTPDC1A2A3K4 AUH-202ENST00000375731 1577 ntAPPRIS P1 TSL 1 (best) BASIC23.77■■□□□ 1.4
PTPDC1A2A3K4 FOXN3-209ENST00000555353 1595 ntAPPRIS P3 TSL 1 (best) BASIC23.77■■□□□ 1.4
PTPDC1A2A3K4 NR1H2-211ENST00000599105 1830 ntAPPRIS ALT2 TSL 5 BASIC23.77■■□□□ 1.4
PTPDC1A2A3K4 TAF15-215ENST00000605844 2191 ntAPPRIS P3 TSL 1 (best) BASIC23.76■■□□□ 1.39
PTPDC1A2A3K4 P2RY11-201ENST00000321826 1943 ntAPPRIS P1 TSL 1 (best) BASIC23.76■■□□□ 1.39
PTPDC1A2A3K4 IRF7-201ENST00000330243 1992 ntAPPRIS P4 TSL 5 BASIC23.76■■□□□ 1.39
PTPDC1A2A3K4 ARSE-205ENST00000540563 1990 ntTSL 2 BASIC23.76■■□□□ 1.39
PTPDC1A2A3K4 PCDHB12-203ENST00000624949 1963 ntTSL 2 BASIC23.76■■□□□ 1.39
PTPDC1A2A3K4 PACSIN3-211ENST00000539589 2009 ntAPPRIS P1 TSL 2 BASIC23.76■■□□□ 1.39
PTPDC1A2A3K4 LIPT2-201ENST00000310109 1018 ntAPPRIS P1 TSL 2 BASIC23.76■■□□□ 1.39
PTPDC1A2A3K4 FAM72A-203ENST00000367129 676 ntTSL 3 BASIC23.76■■□□□ 1.39
PTPDC1A2A3K4 LSM12P1-201ENST00000411836 588 ntBASIC23.76■■□□□ 1.39
PTPDC1A2A3K4 SERPINH1P1-201ENST00000419794 1249 ntBASIC23.76■■□□□ 1.39
PTPDC1A2A3K4 OR2A1-AS1-201ENST00000462305 773 ntBASIC23.76■■□□□ 1.39
PTPDC1A2A3K4 FAM72A-205ENST00000468509 629 ntTSL 5 BASIC23.76■■□□□ 1.39
PTPDC1A2A3K4 AC004889.1-204ENST00000474656 773 ntTSL 3 BASIC23.76■■□□□ 1.39
PTPDC1A2A3K4 ST3GAL4-204ENST00000444328 1812 ntAPPRIS ALT1 TSL 5 BASIC23.75■■□□□ 1.39
PTPDC1A2A3K4 ARHGEF4-202ENST00000355771 1872 ntAPPRIS ALT2 TSL 1 (best) BASIC23.75■■□□□ 1.39
PTPDC1A2A3K4 IMPDH1-208ENST00000470772 1888 ntAPPRIS ALT1 TSL 5 BASIC23.75■■□□□ 1.39
PTPDC1A2A3K4 FAM129C-207ENST00000599124 1918 ntAPPRIS ALT2 TSL 1 (best) BASIC23.75■■□□□ 1.39
PTPDC1A2A3K4 CPT2-203ENST00000635862 2319 ntTSL 5 BASIC23.75■■□□□ 1.39
PTPDC1A2A3K4 PSPN-201ENST00000245810 471 ntAPPRIS P1 TSL 1 (best) BASIC23.75■■□□□ 1.39
PTPDC1A2A3K4 HIST1H2AM-201ENST00000359611 393 ntAPPRIS P1 BASIC23.75■■□□□ 1.39
PTPDC1A2A3K4 STAG3L3-201ENST00000423834 1262 ntTSL 2 BASIC23.75■■□□□ 1.39
PTPDC1A2A3K4 FAM219B-212ENST00000565772 1249 ntTSL 1 (best) BASIC23.75■■□□□ 1.39
PTPDC1A2A3K4 PLK5-204ENST00000588430 900 ntAPPRIS ALT2 TSL 5 BASIC23.75■■□□□ 1.39
PTPDC1A2A3K4 ATP6V0E2-211ENST00000606024 893 ntTSL 1 (best) BASIC23.75■■□□□ 1.39
Retrieved 100 of 98,524 protein–RNA pairs in 28.3 ms