Protein–RNA interactions for Protein: A1A4V9

CCDC189, Coiled-coil domain-containing protein 189, humanhuman

Predictions only

Length 331 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC189A1A4V9 ZSWIM7-205ENST00000472495 703 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
CCDC189A1A4V9 DBNL-220ENST00000494774 2117 ntAPPRIS P4 TSL 1 (best) BASIC20.16■□□□□ 0.82
CCDC189A1A4V9 LRRC1-202ENST00000370888 3180 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
CCDC189A1A4V9 GNB4-204ENST00000468623 1360 ntAPPRIS P1 TSL 2 BASIC20.16■□□□□ 0.82
CCDC189A1A4V9 KLC1-208ENST00000452929 2453 ntTSL 5 BASIC20.16■□□□□ 0.82
CCDC189A1A4V9 TUBGCP3-202ENST00000375669 2723 ntTSL 1 (best) BASIC20.16■□□□□ 0.82
CCDC189A1A4V9 NR1H2-211ENST00000599105 1830 ntAPPRIS ALT2 TSL 5 BASIC20.16■□□□□ 0.82
CCDC189A1A4V9 ARHGDIA-201ENST00000269321 1906 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
CCDC189A1A4V9 S1PR5-201ENST00000333430 2341 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
CCDC189A1A4V9 SAE1-203ENST00000413379 2313 ntTSL 2 BASIC20.15■□□□□ 0.82
CCDC189A1A4V9 RGS11-204ENST00000397770 2390 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
CCDC189A1A4V9 MAP3K21-203ENST00000366624 5809 ntAPPRIS P2 TSL 1 (best) BASIC20.15■□□□□ 0.82
CCDC189A1A4V9 TNKS2-201ENST00000371627 6157 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
CCDC189A1A4V9 SLC35E4-201ENST00000343605 2714 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
CCDC189A1A4V9 GZMM-201ENST00000264553 940 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
CCDC189A1A4V9 MFSD14C-201ENST00000375223 619 ntAPPRIS ALT2 TSL 5 BASIC20.15■□□□□ 0.82
CCDC189A1A4V9 AL731577.2-201ENST00000508096 555 ntTSL 2 BASIC20.15■□□□□ 0.82
CCDC189A1A4V9 TESC-206ENST00000541210 936 ntTSL 3 BASIC20.15■□□□□ 0.82
CCDC189A1A4V9 LRRC37A17P-202ENST00000570478 572 ntTSL 4 BASIC20.15■□□□□ 0.82
CCDC189A1A4V9 RAB43-208ENST00000615093 783 ntTSL 5 BASIC20.15■□□□□ 0.82
CCDC189A1A4V9 ARNTL2-209ENST00000546179 1861 ntAPPRIS ALT2 TSL 2 BASIC20.15■□□□□ 0.82
CCDC189A1A4V9 FP700111.2-201ENST00000619190 1892 ntBASIC20.15■□□□□ 0.82
CCDC189A1A4V9 FUT5-202ENST00000588525 1988 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
CCDC189A1A4V9 VSX1-202ENST00000376709 2192 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
CCDC189A1A4V9 SLC27A3-204ENST00000368661 2410 ntAPPRIS P2 TSL 1 (best) BASIC20.15■□□□□ 0.82
CCDC189A1A4V9 SLC27A3-214ENST00000624995 2413 ntAPPRIS P2 TSL 1 (best) BASIC20.15■□□□□ 0.82
CCDC189A1A4V9 ELOC-209ENST00000602840 2780 ntTSL 5 BASIC20.15■□□□□ 0.82
CCDC189A1A4V9 PCDHAC2-203ENST00000615316 3011 ntBASIC20.15■□□□□ 0.82
CCDC189A1A4V9 CADPS-201ENST00000283269 4591 ntAPPRIS P4 TSL 1 (best) BASIC20.15■□□□□ 0.82
CCDC189A1A4V9 PRODH-215ENST00000610940 2405 ntAPPRIS P3 TSL 1 (best) BASIC20.14■□□□□ 0.82
CCDC189A1A4V9 TRAPPC2L-201ENST00000301021 2215 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
CCDC189A1A4V9 SPHK1-203ENST00000545180 2238 ntAPPRIS P3 TSL 2 BASIC20.14■□□□□ 0.81
CCDC189A1A4V9 LRCH4-211ENST00000619071 2098 ntTSL 5 BASIC20.14■□□□□ 0.81
CCDC189A1A4V9 TREX2-202ENST00000334497 1982 ntTSL 1 (best) BASIC20.14■□□□□ 0.81
CCDC189A1A4V9 TSC22D3-205ENST00000372390 1812 ntTSL 1 (best) BASIC20.14■□□□□ 0.81
CCDC189A1A4V9 AL162377.1-201ENST00000618844 1793 ntBASIC20.14■□□□□ 0.81
CCDC189A1A4V9 SOBP-201ENST00000317357 5245 ntAPPRIS P1 TSL 5 BASIC20.14■□□□□ 0.81
CCDC189A1A4V9 DXO-202ENST00000375349 1667 ntAPPRIS P1 TSL 5 BASIC20.14■□□□□ 0.81
CCDC189A1A4V9 NIPAL4-202ENST00000435489 1600 ntAPPRIS ALT2 TSL 2 BASIC20.14■□□□□ 0.81
CCDC189A1A4V9 BCAP29-209ENST00000465919 942 ntTSL 2 BASIC20.14■□□□□ 0.81
CCDC189A1A4V9 AC093627.4-202ENST00000479592 591 ntTSL 4 BASIC20.14■□□□□ 0.81
CCDC189A1A4V9 CD44-222ENST00000526025 1052 ntTSL 2 BASIC20.14■□□□□ 0.81
CCDC189A1A4V9 C1QTNF5-203ENST00000530681 1046 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
CCDC189A1A4V9 ATP10A-207ENST00000619904 988 ntTSL 5 BASIC20.14■□□□□ 0.81
CCDC189A1A4V9 AC093762.3-201ENST00000641918 318 ntAPPRIS P1 BASIC20.14■□□□□ 0.81
CCDC189A1A4V9 AC005332.8-201ENST00000622750 2735 ntBASIC20.14■□□□□ 0.81
CCDC189A1A4V9 TAF15-215ENST00000605844 2191 ntAPPRIS P3 TSL 1 (best) BASIC20.14■□□□□ 0.81
CCDC189A1A4V9 GNA15-201ENST00000262958 2133 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
CCDC189A1A4V9 QKI-201ENST00000275262 6964 ntTSL 1 (best) BASIC20.13■□□□□ 0.81
CCDC189A1A4V9 TMPRSS5-202ENST00000536856 1811 ntTSL 1 (best) BASIC20.13■□□□□ 0.81
CCDC189A1A4V9 IGFLR1-201ENST00000246532 1645 ntAPPRIS P2 TSL 1 (best) BASIC20.13■□□□□ 0.81
CCDC189A1A4V9 RTCA-201ENST00000260563 1534 ntTSL 1 (best) BASIC20.13■□□□□ 0.81
CCDC189A1A4V9 POLDIP2-202ENST00000618887 1524 ntTSL 2 BASIC20.13■□□□□ 0.81
CCDC189A1A4V9 CDCP1-202ENST00000425231 1416 ntAPPRIS ALT2 TSL 1 (best) BASIC20.13■□□□□ 0.81
CCDC189A1A4V9 FAM129C-205ENST00000595684 2265 ntAPPRIS ALT2 TSL 1 (best) BASIC20.13■□□□□ 0.81
CCDC189A1A4V9 PEX11G-203ENST00000593942 1345 ntTSL 5 BASIC20.13■□□□□ 0.81
CCDC189A1A4V9 EFNA2-201ENST00000215368 949 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
CCDC189A1A4V9 COX20-201ENST00000366528 568 ntTSL 2 BASIC20.13■□□□□ 0.81
CCDC189A1A4V9 AC021660.2-201ENST00000502999 388 ntTSL 3 BASIC20.13■□□□□ 0.81
CCDC189A1A4V9 VPS53-201ENST00000291074 2656 ntTSL 1 (best) BASIC20.13■□□□□ 0.81
CCDC189A1A4V9 CERS4-209ENST00000559450 1637 ntAPPRIS P1 TSL 5 BASIC20.13■□□□□ 0.81
CCDC189A1A4V9 TRPV6-209ENST00000638686 2298 ntAPPRIS P2 TSL 1 (best) BASIC20.13■□□□□ 0.81
CCDC189A1A4V9 GSTM3-202ENST00000361066 1565 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
CCDC189A1A4V9 NOXO1-202ENST00000356120 1539 ntAPPRIS P3 TSL 1 (best) BASIC20.12■□□□□ 0.81
CCDC189A1A4V9 TPD52L1-201ENST00000304877 1468 ntAPPRIS ALT2 TSL 2 BASIC20.12■□□□□ 0.81
CCDC189A1A4V9 ADORA2A-215ENST00000618076 2630 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
CCDC189A1A4V9 NUDT10-202ENST00000376006 2001 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
CCDC189A1A4V9 SDHA-220ENST00000617470 1952 ntTSL 5 BASIC20.12■□□□□ 0.81
CCDC189A1A4V9 MEF2D-203ENST00000368240 1905 ntTSL 1 (best) BASIC20.12■□□□□ 0.81
CCDC189A1A4V9 KCNC4-203ENST00000413138 3018 ntAPPRIS ALT2 TSL 5 BASIC20.12■□□□□ 0.81
CCDC189A1A4V9 GDF10-201ENST00000580279 2458 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
CCDC189A1A4V9 FBXO31-207ENST00000618298 1871 ntTSL 5 BASIC20.12■□□□□ 0.81
CCDC189A1A4V9 ARL6IP4-204ENST00000392435 1339 ntAPPRIS ALT2 TSL 1 (best) BASIC20.12■□□□□ 0.81
CCDC189A1A4V9 ARMC6-202ENST00000392335 2383 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
CCDC189A1A4V9 SMG1P5-201ENST00000411546 2362 ntTSL 1 (best) BASIC20.12■□□□□ 0.81
CCDC189A1A4V9 MCU-201ENST00000357157 2874 ntTSL 1 (best) BASIC20.12■□□□□ 0.81
CCDC189A1A4V9 SAPCD2P1-201ENST00000395413 1184 ntBASIC20.12■□□□□ 0.81
CCDC189A1A4V9 RPL29-209ENST00000495383 713 ntAPPRIS P1 TSL 2 BASIC20.12■□□□□ 0.81
CCDC189A1A4V9 KRT18P14-201ENST00000534205 1250 ntBASIC20.12■□□□□ 0.81
CCDC189A1A4V9 ABCC6P2-202ENST00000542005 706 ntTSL 1 (best) BASIC20.12■□□□□ 0.81
CCDC189A1A4V9 ABCC6-204ENST00000575728 714 ntTSL 1 (best) BASIC20.12■□□□□ 0.81
CCDC189A1A4V9 PPP1R14A-205ENST00000591585 949 ntTSL 2 BASIC20.12■□□□□ 0.81
CCDC189A1A4V9 SP2-202ENST00000613139 908 ntTSL 5 BASIC20.12■□□□□ 0.81
CCDC189A1A4V9 MIR2861-201ENST00000636310 90 ntBASIC20.12■□□□□ 0.81
CCDC189A1A4V9 RBM45-207ENST00000616198 1788 ntAPPRIS ALT1 TSL 1 (best) BASIC20.12■□□□□ 0.81
CCDC189A1A4V9 GORAB-201ENST00000367762 1699 ntTSL 1 (best) BASIC20.12■□□□□ 0.81
CCDC189A1A4V9 ATG4B-204ENST00000402096 1685 ntTSL 2 BASIC20.12■□□□□ 0.81
CCDC189A1A4V9 MON1A-203ENST00000455683 1617 ntAPPRIS ALT2 TSL 1 (best) BASIC20.12■□□□□ 0.81
CCDC189A1A4V9 ZNF652-202ENST00000430262 4701 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
CCDC189A1A4V9 SLC25A10-201ENST00000331531 1946 ntTSL 1 (best) BASIC20.12■□□□□ 0.81
CCDC189A1A4V9 B4GALT2-204ENST00000434555 1923 ntTSL 1 (best) BASIC20.12■□□□□ 0.81
CCDC189A1A4V9 EBF1-202ENST00000380654 2345 ntTSL 1 (best) BASIC20.11■□□□□ 0.81
CCDC189A1A4V9 DET1-207ENST00000564406 2315 ntTSL 2 BASIC20.11■□□□□ 0.81
CCDC189A1A4V9 SPON2-201ENST00000290902 1869 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
CCDC189A1A4V9 ALG1-202ENST00000544428 1419 ntTSL 2 BASIC20.11■□□□□ 0.81
CCDC189A1A4V9 ACBD4-201ENST00000321854 1806 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
CCDC189A1A4V9 ST3GAL4-204ENST00000444328 1812 ntAPPRIS ALT1 TSL 5 BASIC20.11■□□□□ 0.81
CCDC189A1A4V9 ME3-202ENST00000393324 2240 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
CCDC189A1A4V9 NEFHP1-201ENST00000412845 2629 ntBASIC20.11■□□□□ 0.81
CCDC189A1A4V9 BCL7A-201ENST00000261822 2581 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
Retrieved 100 of 98,524 protein–RNA pairs in 20.1 ms