Protein–RNA interactions for Protein: A0A1B0GX56

TRDV1, T-cell receptor delta variable 1 (Fragment), humanhuman

Predictions only

Length 115 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRDV1A0A1B0GX56 ZDHHC7-203ENST00000564466 1488 ntTSL 5 BASIC17.78■□□□□ 0.44
TRDV1A0A1B0GX56 B4GALT2-201ENST00000309519 2004 ntTSL 2 BASIC17.78■□□□□ 0.44
TRDV1A0A1B0GX56 PLPBP-201ENST00000328195 2558 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
TRDV1A0A1B0GX56 ADAM33-202ENST00000356518 3677 ntAPPRIS P3 TSL 1 (best) BASIC17.78■□□□□ 0.44
TRDV1A0A1B0GX56 SNAP47-202ENST00000366759 2362 ntAPPRIS P3 TSL 1 (best) BASIC17.78■□□□□ 0.44
TRDV1A0A1B0GX56 GSDMD-212ENST00000533063 1800 ntAPPRIS ALT2 TSL 1 (best) BASIC17.78■□□□□ 0.44
TRDV1A0A1B0GX56 KRTAP17-1-201ENST00000334202 779 ntAPPRIS P1 BASIC17.78■□□□□ 0.44
TRDV1A0A1B0GX56 DCTN3-202ENST00000341694 899 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
TRDV1A0A1B0GX56 CTAG1B-202ENST00000359887 998 ntTSL 2 BASIC17.78■□□□□ 0.44
TRDV1A0A1B0GX56 DCTN3-205ENST00000378916 773 ntTSL 2 BASIC17.78■□□□□ 0.44
TRDV1A0A1B0GX56 RARRES2P11-201ENST00000635158 484 ntBASIC17.78■□□□□ 0.44
TRDV1A0A1B0GX56 PTOV1-AS1-201ENST00000596521 2155 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
TRDV1A0A1B0GX56 CXCR3-202ENST00000373693 1624 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
TRDV1A0A1B0GX56 LYSMD4-202ENST00000344791 2885 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
TRDV1A0A1B0GX56 SLC1A6-202ENST00000430939 1794 ntTSL 2 BASIC17.78■□□□□ 0.44
TRDV1A0A1B0GX56 AGPAT5-201ENST00000285518 3685 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
TRDV1A0A1B0GX56 RBM26-207ENST00000622611 5230 ntTSL 2 BASIC17.78■□□□□ 0.44
TRDV1A0A1B0GX56 SREBF2-209ENST00000612482 5365 ntTSL 5 BASIC17.78■□□□□ 0.44
TRDV1A0A1B0GX56 BTBD9-205ENST00000419706 2034 ntTSL 1 (best) BASIC17.77■□□□□ 0.44
TRDV1A0A1B0GX56 RAB1A-202ENST00000409751 1333 ntTSL 5 BASIC17.77■□□□□ 0.44
TRDV1A0A1B0GX56 RIMBP3B-201ENST00000620804 6105 ntAPPRIS P1 BASIC17.77■□□□□ 0.44
TRDV1A0A1B0GX56 GLB1-201ENST00000307363 2616 ntAPPRIS P4 TSL 1 (best) BASIC17.77■□□□□ 0.44
TRDV1A0A1B0GX56 HMCES-203ENST00000417226 1490 ntTSL 1 (best) BASIC17.77■□□□□ 0.44
TRDV1A0A1B0GX56 DRAP1-201ENST00000312515 989 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
TRDV1A0A1B0GX56 URAD-201ENST00000332715 931 ntAPPRIS P1 TSL 5 BASIC17.77■□□□□ 0.44
TRDV1A0A1B0GX56 NAXE-201ENST00000368233 1012 ntTSL 2 BASIC17.77■□□□□ 0.44
TRDV1A0A1B0GX56 MT1M-201ENST00000379818 829 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
TRDV1A0A1B0GX56 BX842568.3-201ENST00000418104 571 ntBASIC17.77■□□□□ 0.44
TRDV1A0A1B0GX56 RARRES2P1-201ENST00000474487 481 ntBASIC17.77■□□□□ 0.44
TRDV1A0A1B0GX56 KRTAP5-4-202ENST00000616115 660 ntAPPRIS ALT2 TSL 5 BASIC17.77■□□□□ 0.44
TRDV1A0A1B0GX56 AGFG2-201ENST00000300176 4796 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
TRDV1A0A1B0GX56 UGDH-206ENST00000507089 1712 ntTSL 2 BASIC17.77■□□□□ 0.44
TRDV1A0A1B0GX56 GNB1-201ENST00000378609 3132 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.43
TRDV1A0A1B0GX56 BID-205ENST00000399774 2167 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.43
TRDV1A0A1B0GX56 NOXO1-202ENST00000356120 1539 ntAPPRIS P3 TSL 1 (best) BASIC17.77■□□□□ 0.43
TRDV1A0A1B0GX56 ZFAND6-224ENST00000618205 1659 ntAPPRIS P1 TSL 5 BASIC17.77■□□□□ 0.43
TRDV1A0A1B0GX56 AC011511.1-201ENST00000452032 1956 ntAPPRIS P1 TSL 2 BASIC17.77■□□□□ 0.43
TRDV1A0A1B0GX56 SLC12A5-210ENST00000616202 2445 ntTSL 1 (best) BASIC17.77■□□□□ 0.43
TRDV1A0A1B0GX56 EML3-217ENST00000531557 2509 ntTSL 5 BASIC17.76■□□□□ 0.43
TRDV1A0A1B0GX56 EDN3-204ENST00000371028 2397 ntAPPRIS P4 TSL 5 BASIC17.76■□□□□ 0.43
TRDV1A0A1B0GX56 FDXR-217ENST00000582944 1766 ntTSL 2 BASIC17.76■□□□□ 0.43
TRDV1A0A1B0GX56 MARK1-205ENST00000611084 5321 ntAPPRIS ALT1 TSL 1 (best) BASIC17.76■□□□□ 0.43
TRDV1A0A1B0GX56 PRDM1-202ENST00000369091 2612 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
TRDV1A0A1B0GX56 SPTBN4-207ENST00000595535 6105 ntTSL 5 BASIC17.76■□□□□ 0.43
TRDV1A0A1B0GX56 CASP16P-202ENST00000575497 2161 ntTSL 2 BASIC17.76■□□□□ 0.43
TRDV1A0A1B0GX56 PRKCSH-209ENST00000589838 1898 ntAPPRIS P3 TSL 1 (best) BASIC17.76■□□□□ 0.43
TRDV1A0A1B0GX56 HSPE1-201ENST00000233893 950 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
TRDV1A0A1B0GX56 TMEM80-201ENST00000397510 1094 ntAPPRIS P2 TSL 5 BASIC17.76■□□□□ 0.43
TRDV1A0A1B0GX56 TMTC1-203ENST00000539277 2758 ntAPPRIS P2 TSL 1 (best) BASIC17.76■□□□□ 0.43
TRDV1A0A1B0GX56 HOXC4-201ENST00000303406 1524 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
TRDV1A0A1B0GX56 TSSC4-203ENST00000380996 1544 ntAPPRIS ALT2 TSL 1 (best) BASIC17.76■□□□□ 0.43
TRDV1A0A1B0GX56 ST8SIA1-204ENST00000404299 1920 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
TRDV1A0A1B0GX56 HOXB9-201ENST00000311177 2581 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
TRDV1A0A1B0GX56 NKX2-1-203ENST00000518149 2583 ntAPPRIS P1 TSL 5 BASIC17.76■□□□□ 0.43
TRDV1A0A1B0GX56 TDRKH-203ENST00000368824 2824 ntAPPRIS P2 TSL 1 (best) BASIC17.76■□□□□ 0.43
TRDV1A0A1B0GX56 SYN2-206ENST00000621198 2674 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
TRDV1A0A1B0GX56 SLC11A2-208ENST00000546743 1740 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
TRDV1A0A1B0GX56 GSR-204ENST00000537535 1323 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
TRDV1A0A1B0GX56 AC132008.2-203ENST00000418868 1552 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
TRDV1A0A1B0GX56 TINAGL1-211ENST00000537531 1841 ntAPPRIS ALT2 TSL 5 BASIC17.75■□□□□ 0.43
TRDV1A0A1B0GX56 PRKAR1B-212ENST00000544935 2494 ntAPPRIS P1 TSL 5 BASIC17.75■□□□□ 0.43
TRDV1A0A1B0GX56 CLN3-207ENST00000395653 1430 ntTSL 5 BASIC17.75■□□□□ 0.43
TRDV1A0A1B0GX56 DPP3P2-201ENST00000416030 1696 ntBASIC17.75■□□□□ 0.43
TRDV1A0A1B0GX56 CD37-204ENST00000535669 1674 ntTSL 2 BASIC17.75■□□□□ 0.43
TRDV1A0A1B0GX56 DCAF4-201ENST00000353777 1940 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
TRDV1A0A1B0GX56 MRPL41-201ENST00000371443 1262 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
TRDV1A0A1B0GX56 ORMDL1-202ENST00000392349 1137 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
TRDV1A0A1B0GX56 ZDHHC14-203ENST00000359775 7380 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
TRDV1A0A1B0GX56 PNMA8B-202ENST00000599531 5308 ntAPPRIS P1 BASIC17.75■□□□□ 0.43
TRDV1A0A1B0GX56 CMTM7-201ENST00000334983 2038 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
TRDV1A0A1B0GX56 ANKRD40-201ENST00000285243 4184 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
TRDV1A0A1B0GX56 AGTR1-201ENST00000349243 2356 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
TRDV1A0A1B0GX56 EIF3B-202ENST00000397011 2966 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
TRDV1A0A1B0GX56 CNOT11-201ENST00000289382 2599 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
TRDV1A0A1B0GX56 WDR90-201ENST00000293879 5488 ntAPPRIS P2 TSL 5 BASIC17.75■□□□□ 0.43
TRDV1A0A1B0GX56 DPF1-209ENST00000456296 1562 ntAPPRIS P1 TSL 5 BASIC17.74■□□□□ 0.43
TRDV1A0A1B0GX56 FGFR2-208ENST00000360144 3001 ntTSL 2 BASIC17.74■□□□□ 0.43
TRDV1A0A1B0GX56 ZNHIT2-201ENST00000310597 1306 ntAPPRIS P1 BASIC17.74■□□□□ 0.43
TRDV1A0A1B0GX56 ISOC1-201ENST00000173527 1940 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
TRDV1A0A1B0GX56 GRB10-201ENST00000335866 5032 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
TRDV1A0A1B0GX56 B3GALNT1-212ENST00000488170 1660 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
TRDV1A0A1B0GX56 SCARF2-203ENST00000623402 3248 ntAPPRIS P3 TSL 1 (best) BASIC17.74■□□□□ 0.43
TRDV1A0A1B0GX56 UBE2N-201ENST00000318066 5186 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
TRDV1A0A1B0GX56 IL1R1-205ENST00000410023 5143 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
TRDV1A0A1B0GX56 TMEM54-201ENST00000329151 871 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
TRDV1A0A1B0GX56 SRM-201ENST00000376957 1266 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
TRDV1A0A1B0GX56 POU5F1P4-201ENST00000413175 1085 ntBASIC17.74■□□□□ 0.43
TRDV1A0A1B0GX56 ZEB1-AS1-201ENST00000423714 456 ntTSL 3 BASIC17.74■□□□□ 0.43
TRDV1A0A1B0GX56 OR2A1-AS1-204ENST00000470435 602 ntBASIC17.74■□□□□ 0.43
TRDV1A0A1B0GX56 NRIP3-203ENST00000531090 980 ntTSL 2 BASIC17.74■□□□□ 0.43
TRDV1A0A1B0GX56 NBPF26-209ENST00000624419 1133 ntTSL 5 BASIC17.74■□□□□ 0.43
TRDV1A0A1B0GX56 AC009133.6-201ENST00000609618 2252 ntAPPRIS P1 TSL 5 BASIC17.74■□□□□ 0.43
TRDV1A0A1B0GX56 FKRP-202ENST00000391909 2801 ntAPPRIS P1 TSL 2 BASIC17.74■□□□□ 0.43
TRDV1A0A1B0GX56 FBXO41-204ENST00000520530 3293 ntAPPRIS P1 TSL 5 BASIC17.74■□□□□ 0.43
TRDV1A0A1B0GX56 PTGES2-AS1-201ENST00000443493 2100 ntBASIC17.74■□□□□ 0.43
TRDV1A0A1B0GX56 FAM198A-202ENST00000430121 3121 ntAPPRIS P2 TSL 5 BASIC17.74■□□□□ 0.43
TRDV1A0A1B0GX56 KCNQ5-201ENST00000342056 6688 ntAPPRIS ALT1 TSL 5 BASIC17.74■□□□□ 0.43
TRDV1A0A1B0GX56 CDH24-205ENST00000554034 2759 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
TRDV1A0A1B0GX56 EPO-201ENST00000252723 1330 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
TRDV1A0A1B0GX56 CCDC166-201ENST00000542437 1320 ntAPPRIS P1 TSL 2 BASIC17.73■□□□□ 0.43
Retrieved 100 of 98,524 protein–RNA pairs in 28.9 ms