Protein–RNA interactions for Protein: A0A0B4J275

TRAV17, T-cell receptor alpha variable 17 (Fragment), humanhuman

Predictions only

Length 112 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV17A0A0B4J275 CNOT8-224ENST00000523698 862 ntTSL 2 BASIC18.37■□□□□ 0.53
TRAV17A0A0B4J275 AC015712.2-203ENST00000560461 688 ntTSL 3 BASIC18.37■□□□□ 0.53
TRAV17A0A0B4J275 IMPA2-208ENST00000589238 923 ntTSL 3 BASIC18.37■□□□□ 0.53
TRAV17A0A0B4J275 KRTAP5-11-203ENST00000617152 558 ntAPPRIS ALT2 TSL 5 BASIC18.37■□□□□ 0.53
TRAV17A0A0B4J275 ANKRD2-201ENST00000298808 1350 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
TRAV17A0A0B4J275 WDR45-207ENST00000376372 1639 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
TRAV17A0A0B4J275 MON1A-203ENST00000455683 1617 ntAPPRIS ALT2 TSL 1 (best) BASIC18.37■□□□□ 0.53
TRAV17A0A0B4J275 RNH1-202ENST00000356187 1791 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
TRAV17A0A0B4J275 TRAPPC5-204ENST00000596148 5498 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
TRAV17A0A0B4J275 PKMYT1-213ENST00000574385 1892 ntAPPRIS P1 TSL 2 BASIC18.37■□□□□ 0.53
TRAV17A0A0B4J275 NECAB3-201ENST00000246190 1989 ntTSL 5 BASIC18.36■□□□□ 0.53
TRAV17A0A0B4J275 OTOP1-201ENST00000296358 1864 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
TRAV17A0A0B4J275 PRSS3-201ENST00000342836 1144 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
TRAV17A0A0B4J275 C7orf26-201ENST00000344417 2182 ntAPPRIS P1 TSL 2 BASIC18.36■□□□□ 0.53
TRAV17A0A0B4J275 TNFRSF25-203ENST00000351959 1441 ntAPPRIS ALT2 TSL 1 (best) BASIC18.36■□□□□ 0.53
TRAV17A0A0B4J275 EYA2-203ENST00000357410 2465 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
TRAV17A0A0B4J275 CDC42BPB-201ENST00000361246 6758 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
TRAV17A0A0B4J275 HACD1-202ENST00000361271 2237 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
TRAV17A0A0B4J275 TSTD1-202ENST00000368023 574 ntAPPRIS ALT2 TSL 2 BASIC18.36■□□□□ 0.53
TRAV17A0A0B4J275 NXNL2-202ENST00000375855 1457 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
TRAV17A0A0B4J275 USF2-203ENST00000379134 648 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
TRAV17A0A0B4J275 PLEKHB2-203ENST00000404460 1167 ntTSL 2 BASIC18.36■□□□□ 0.53
TRAV17A0A0B4J275 LINC00620-201ENST00000419618 996 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
TRAV17A0A0B4J275 FXYD3-203ENST00000435734 1467 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
TRAV17A0A0B4J275 AC068831.2-201ENST00000448987 367 ntTSL 2 BASIC18.36■□□□□ 0.53
TRAV17A0A0B4J275 LINC00894-209ENST00000458274 547 ntTSL 2 BASIC18.36■□□□□ 0.53
TRAV17A0A0B4J275 AC035140.1-201ENST00000507957 493 ntTSL 3 BASIC18.36■□□□□ 0.53
TRAV17A0A0B4J275 TMEM9B-205ENST00000534025 2083 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
TRAV17A0A0B4J275 BX088651.1-201ENST00000540551 451 ntBASIC18.36■□□□□ 0.53
TRAV17A0A0B4J275 MIEF2-207ENST00000578621 540 ntTSL 4 BASIC18.36■□□□□ 0.53
TRAV17A0A0B4J275 CD7-207ENST00000584284 2021 ntAPPRIS ALT2 TSL 1 (best) BASIC18.36■□□□□ 0.53
TRAV17A0A0B4J275 AC005943.1-201ENST00000585937 1002 ntAPPRIS P1 TSL 3 BASIC18.36■□□□□ 0.53
TRAV17A0A0B4J275 EPS8L1-209ENST00000588359 1407 ntTSL 5 BASIC18.36■□□□□ 0.53
TRAV17A0A0B4J275 ELAC1-203ENST00000588577 694 ntTSL 2 BASIC18.36■□□□□ 0.53
TRAV17A0A0B4J275 AC121338.2-201ENST00000622535 1744 ntBASIC18.36■□□□□ 0.53
TRAV17A0A0B4J275 RNF149-201ENST00000295317 2458 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
TRAV17A0A0B4J275 SHMT1-202ENST00000352886 2437 ntTSL 2 BASIC18.35■□□□□ 0.53
TRAV17A0A0B4J275 FOXA2-201ENST00000377115 2401 ntAPPRIS P3 TSL 1 (best) BASIC18.35■□□□□ 0.53
TRAV17A0A0B4J275 FBXW4P1-201ENST00000426721 2239 ntBASIC18.35■□□□□ 0.53
TRAV17A0A0B4J275 TMEM11-201ENST00000317635 2095 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
TRAV17A0A0B4J275 HNRNPLL-204ENST00000409328 1908 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
TRAV17A0A0B4J275 CD247-202ENST00000392122 1678 ntAPPRIS ALT1 TSL 1 (best) BASIC18.35■□□□□ 0.53
TRAV17A0A0B4J275 NSUN5-204ENST00000438747 1663 ntAPPRIS P4 TSL 1 (best) BASIC18.35■□□□□ 0.53
TRAV17A0A0B4J275 UBE2L6-202ENST00000340573 1573 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
TRAV17A0A0B4J275 FGFR1-214ENST00000447712 5900 ntAPPRIS P3 TSL 1 (best) BASIC18.35■□□□□ 0.53
TRAV17A0A0B4J275 GRK3-203ENST00000619906 2873 ntTSL 5 BASIC18.35■□□□□ 0.53
TRAV17A0A0B4J275 CTDSP2-204ENST00000548823 1368 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
TRAV17A0A0B4J275 CTAG2-201ENST00000247306 993 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
TRAV17A0A0B4J275 NTAN1-201ENST00000287706 1204 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
TRAV17A0A0B4J275 SIVA1-201ENST00000329967 802 ntAPPRIS P2 TSL 1 (best) BASIC18.35■□□□□ 0.53
TRAV17A0A0B4J275 UBE2F-203ENST00000409633 837 ntTSL 3 BASIC18.35■□□□□ 0.53
TRAV17A0A0B4J275 AC211429.1-201ENST00000415277 523 ntBASIC18.35■□□□□ 0.53
TRAV17A0A0B4J275 ECEL1P3-201ENST00000427961 737 ntBASIC18.35■□□□□ 0.53
TRAV17A0A0B4J275 AC004080.6-201ENST00000467897 919 ntTSL 5 BASIC18.35■□□□□ 0.53
TRAV17A0A0B4J275 STXBP1-203ENST00000476182 566 ntTSL 5 BASIC18.35■□□□□ 0.53
TRAV17A0A0B4J275 LINC02167-201ENST00000562769 594 ntTSL 3 BASIC18.35■□□□□ 0.53
TRAV17A0A0B4J275 C17orf97-203ENST00000571106 736 ntAPPRIS ALT2 TSL 2 BASIC18.35■□□□□ 0.53
TRAV17A0A0B4J275 LRRC75A-AS1-225ENST00000581913 1091 ntTSL 2 BASIC18.35■□□□□ 0.53
TRAV17A0A0B4J275 LINC01023-201ENST00000606054 436 ntBASIC18.35■□□□□ 0.53
TRAV17A0A0B4J275 AL121906.2-201ENST00000621597 723 ntBASIC18.35■□□□□ 0.53
TRAV17A0A0B4J275 AC113410.3-201ENST00000623366 203 ntBASIC18.35■□□□□ 0.53
TRAV17A0A0B4J275 AC004706.3-201ENST00000634558 1009 ntTSL 5 BASIC18.35■□□□□ 0.53
TRAV17A0A0B4J275 ASRGL1-202ENST00000415229 2270 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
TRAV17A0A0B4J275 FGFR1-241ENST00000619564 5482 ntTSL 5 BASIC18.35■□□□□ 0.53
TRAV17A0A0B4J275 BEST2-204ENST00000553030 2000 ntAPPRIS P1 TSL 5 BASIC18.35■□□□□ 0.53
TRAV17A0A0B4J275 CREG1-201ENST00000370509 1974 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
TRAV17A0A0B4J275 TMEM51-201ENST00000376008 1931 ntAPPRIS P1 TSL 2 BASIC18.35■□□□□ 0.53
TRAV17A0A0B4J275 TTYH1-202ENST00000376530 1885 ntAPPRIS P3 TSL 1 (best) BASIC18.35■□□□□ 0.53
TRAV17A0A0B4J275 AL049796.1-201ENST00000565336 1766 ntBASIC18.35■□□□□ 0.53
TRAV17A0A0B4J275 OTUB1-209ENST00000538426 1729 ntAPPRIS P2 TSL 1 (best) BASIC18.35■□□□□ 0.53
TRAV17A0A0B4J275 MYB-221ENST00000527615 2381 ntTSL 5 BASIC18.34■□□□□ 0.53
TRAV17A0A0B4J275 NOTUM-201ENST00000409678 2329 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
TRAV17A0A0B4J275 NAAA-206ENST00000507956 1300 ntAPPRIS ALT2 TSL 2 BASIC18.34■□□□□ 0.53
TRAV17A0A0B4J275 SLC35B2-205ENST00000538577 1909 ntTSL 2 BASIC18.34■□□□□ 0.53
TRAV17A0A0B4J275 HLA-G-202ENST00000376815 851 ntBASIC18.34■□□□□ 0.53
TRAV17A0A0B4J275 HLA-G-203ENST00000376818 1127 ntBASIC18.34■□□□□ 0.53
TRAV17A0A0B4J275 POMC-202ENST00000380794 1295 ntAPPRIS P1 TSL 2 BASIC18.34■□□□□ 0.53
TRAV17A0A0B4J275 HAGLROS-201ENST00000426615 1121 ntTSL 2 BASIC18.34■□□□□ 0.53
TRAV17A0A0B4J275 NDUFA13-203ENST00000503283 825 ntTSL 2 BASIC18.34■□□□□ 0.53
TRAV17A0A0B4J275 RPS20-210ENST00000523936 899 ntTSL 2 BASIC18.34■□□□□ 0.53
TRAV17A0A0B4J275 RPH3AL-203ENST00000536489 1235 ntTSL 2 BASIC18.34■□□□□ 0.53
TRAV17A0A0B4J275 DHRS4-206ENST00000558581 1143 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
TRAV17A0A0B4J275 NOXO1-205ENST00000566005 1144 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
TRAV17A0A0B4J275 FXYD1-204ENST00000588081 645 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
TRAV17A0A0B4J275 PRKACA-209ENST00000590853 1101 ntTSL 5 BASIC18.34■□□□□ 0.53
TRAV17A0A0B4J275 FCMR-210ENST00000628511 1055 ntAPPRIS ALT2 TSL 1 (best) BASIC18.34■□□□□ 0.53
TRAV17A0A0B4J275 NAPEPLD-208ENST00000427257 1822 ntAPPRIS P1 TSL 2 BASIC18.34■□□□□ 0.53
TRAV17A0A0B4J275 TBL1Y-202ENST00000355162 2376 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
TRAV17A0A0B4J275 CAPN12-212ENST00000601953 2381 ntTSL 5 BASIC18.34■□□□□ 0.53
TRAV17A0A0B4J275 ZNF582-202ENST00000586929 2053 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
TRAV17A0A0B4J275 BID-212ENST00000614949 1988 ntTSL 5 BASIC18.33■□□□□ 0.53
TRAV17A0A0B4J275 GTPBP6-201ENST00000326153 1907 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.53
TRAV17A0A0B4J275 AC007383.3-201ENST00000453039 1411 ntTSL 3 BASIC18.33■□□□□ 0.53
TRAV17A0A0B4J275 HAUS4-204ENST00000490506 1447 ntTSL 1 (best) BASIC18.33■□□□□ 0.53
TRAV17A0A0B4J275 ASAP2-202ENST00000315273 5582 ntAPPRIS ALT2 TSL 1 (best) BASIC18.33■□□□□ 0.53
TRAV17A0A0B4J275 CRHR1-201ENST00000293493 2621 ntTSL 5 BASIC18.33■□□□□ 0.53
TRAV17A0A0B4J275 ARMC10-202ENST00000323716 2635 ntTSL 1 (best) BASIC18.33■□□□□ 0.53
TRAV17A0A0B4J275 FBXW11-203ENST00000393802 2181 ntTSL 1 (best) BASIC18.33■□□□□ 0.52
TRAV17A0A0B4J275 BCL11B-203ENST00000443726 2599 ntAPPRIS ALT2 TSL 5 BASIC18.33■□□□□ 0.52
TRAV17A0A0B4J275 PTS-201ENST00000280362 935 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
Retrieved 100 of 98,524 protein–RNA pairs in 11.6 ms