Protein–RNA interactions for Protein: F8WFD2

NPIPA3, Nuclear pore complex-interacting protein family member A3, humanhuman

Predictions only

Length 350 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NPIPA3F8WFD2 UNC50-203ENST00000409347 1276 ntTSL 1 (best) BASIC7.46□□□□□ -1.22
NPIPA3F8WFD2 GLS-205ENST00000409626 997 ntTSL 2 BASIC7.46□□□□□ -1.22
NPIPA3F8WFD2 RPL21P107-201ENST00000411449 460 ntBASIC7.46□□□□□ -1.22
NPIPA3F8WFD2 AC009228.1-201ENST00000413254 240 ntTSL 2 BASIC7.46□□□□□ -1.22
NPIPA3F8WFD2 AC126124.1-201ENST00000426104 185 ntBASIC7.46□□□□□ -1.22
NPIPA3F8WFD2 AL357632.1-201ENST00000426688 643 ntBASIC7.46□□□□□ -1.22
NPIPA3F8WFD2 AL512366.1-201ENST00000438919 636 ntTSL 3 BASIC7.46□□□□□ -1.22
NPIPA3F8WFD2 LINC01185-201ENST00000439412 554 ntTSL 4 BASIC7.46□□□□□ -1.22
NPIPA3F8WFD2 WDR82P1-201ENST00000439836 939 ntBASIC7.46□□□□□ -1.22
NPIPA3F8WFD2 FUNDC2P4-201ENST00000441207 421 ntBASIC7.46□□□□□ -1.22
NPIPA3F8WFD2 AL160408.4-201ENST00000441360 933 ntTSL 2 BASIC7.46□□□□□ -1.22
NPIPA3F8WFD2 RPL4P2-201ENST00000447259 1282 ntBASIC7.46□□□□□ -1.22
NPIPA3F8WFD2 C15orf40-202ENST00000451195 518 ntTSL 3 BASIC7.46□□□□□ -1.22
NPIPA3F8WFD2 RN7SL508P-201ENST00000464472 303 ntBASIC7.46□□□□□ -1.22
NPIPA3F8WFD2 PHYKPL-205ENST00000476170 824 ntTSL 4 BASIC7.46□□□□□ -1.22
NPIPA3F8WFD2 AC026254.1-201ENST00000479473 431 ntBASIC7.46□□□□□ -1.22
NPIPA3F8WFD2 FTH1P4-201ENST00000480365 553 ntBASIC7.46□□□□□ -1.22
NPIPA3F8WFD2 RN7SL272P-201ENST00000487762 289 ntBASIC7.46□□□□□ -1.22
NPIPA3F8WFD2 AL031073.1-201ENST00000503029 1139 ntBASIC7.46□□□□□ -1.22
NPIPA3F8WFD2 LINC02058-201ENST00000507491 707 ntTSL 3 BASIC7.46□□□□□ -1.22
NPIPA3F8WFD2 RPL37-205ENST00000509877 637 ntTSL 5 BASIC7.46□□□□□ -1.22
NPIPA3F8WFD2 MTND6P17-201ENST00000511811 519 ntBASIC7.46□□□□□ -1.22
NPIPA3F8WFD2 TMBIM6-225ENST00000552370 882 ntAPPRIS P3 TSL 5 BASIC7.46□□□□□ -1.22
NPIPA3F8WFD2 AL132855.1-201ENST00000557368 207 ntTSL 3 BASIC7.46□□□□□ -1.22
NPIPA3F8WFD2 SNHG19-201ENST00000563192 342 ntTSL 2 BASIC7.46□□□□□ -1.22
NPIPA3F8WFD2 ZNF771-203ENST00000564550 1187 ntTSL 5 BASIC7.46□□□□□ -1.22
NPIPA3F8WFD2 AC009118.1-201ENST00000566019 374 ntTSL 2 BASIC7.46□□□□□ -1.22
NPIPA3F8WFD2 AC110921.1-201ENST00000577544 612 ntTSL 3 BASIC7.46□□□□□ -1.22
NPIPA3F8WFD2 AC090358.1-201ENST00000579862 852 ntTSL 3 BASIC7.46□□□□□ -1.22
NPIPA3F8WFD2 AC090699.1-201ENST00000586264 321 ntBASIC7.46□□□□□ -1.22
NPIPA3F8WFD2 AL691432.1-202ENST00000597891 502 ntBASIC7.46□□□□□ -1.22
NPIPA3F8WFD2 AC007346.1-202ENST00000602826 684 ntBASIC7.46□□□□□ -1.22
NPIPA3F8WFD2 AL731533.2-201ENST00000607898 578 ntBASIC7.46□□□□□ -1.22
NPIPA3F8WFD2 AC006238.1-201ENST00000609787 534 ntBASIC7.46□□□□□ -1.22
NPIPA3F8WFD2 AC123788.2-201ENST00000612290 283 ntBASIC7.46□□□□□ -1.22
NPIPA3F8WFD2 CEACAM5-208ENST00000615021 1694 ntTSL 1 (best) BASIC7.46□□□□□ -1.22
NPIPA3F8WFD2 CEP85-209ENST00000640292 2286 ntAPPRIS ALT1 TSL 5 BASIC7.46□□□□□ -1.22
NPIPA3F8WFD2 NTRK3-212ENST00000558676 4670 ntTSL 1 (best) BASIC7.46□□□□□ -1.22
NPIPA3F8WFD2 NLGN4X-201ENST00000275857 5454 ntAPPRIS P2 TSL 1 (best) BASIC7.46□□□□□ -1.22
NPIPA3F8WFD2 MYLK-206ENST00000418370 7282 ntTSL 1 (best) BASIC7.46□□□□□ -1.22
NPIPA3F8WFD2 AL080317.3-201ENST00000607434 4315 ntBASIC7.46□□□□□ -1.22
NPIPA3F8WFD2 CSTF2T-201ENST00000331173 4105 ntAPPRIS P1 BASIC7.46□□□□□ -1.22
NPIPA3F8WFD2 MCM6-201ENST00000264156 3736 ntAPPRIS P1 TSL 1 (best) BASIC7.46□□□□□ -1.22
NPIPA3F8WFD2 AC010680.2-201ENST00000603521 2117 ntBASIC7.46□□□□□ -1.22
NPIPA3F8WFD2 RORB-202ENST00000396204 2996 ntTSL 1 (best) BASIC7.46□□□□□ -1.22
NPIPA3F8WFD2 SEPT4-202ENST00000317268 1784 ntAPPRIS P4 TSL 1 (best) BASIC7.46□□□□□ -1.22
NPIPA3F8WFD2 AP002759.1-201ENST00000526840 1571 ntTSL 1 (best) BASIC7.46□□□□□ -1.22
NPIPA3F8WFD2 COPG1-201ENST00000314797 3078 ntAPPRIS P1 TSL 1 (best) BASIC7.46□□□□□ -1.22
NPIPA3F8WFD2 DTNA-209ENST00000556414 1626 ntTSL 2 BASIC7.45□□□□□ -1.22
NPIPA3F8WFD2 ITPR1-204ENST00000443694 9513 ntAPPRIS ALT1 TSL 1 (best) BASIC7.45□□□□□ -1.22
NPIPA3F8WFD2 HAVCR1-205ENST00000523175 1449 ntAPPRIS P3 TSL 1 (best) BASIC7.45□□□□□ -1.22
NPIPA3F8WFD2 ZC3H15-201ENST00000337859 2138 ntAPPRIS P1 TSL 1 (best) BASIC7.45□□□□□ -1.22
NPIPA3F8WFD2 AC139256.1-201ENST00000569858 2598 ntTSL 2 BASIC7.45□□□□□ -1.22
NPIPA3F8WFD2 ALG8-221ENST00000615266 1469 ntTSL 5 BASIC7.45□□□□□ -1.22
NPIPA3F8WFD2 CACNB2-201ENST00000282343 3524 ntTSL 1 (best) BASIC7.45□□□□□ -1.22
NPIPA3F8WFD2 SNTG1-207ENST00000522124 3504 ntAPPRIS P1 TSL 1 (best) BASIC7.45□□□□□ -1.22
NPIPA3F8WFD2 KIDINS220-206ENST00000473731 7248 ntTSL 5 BASIC7.45□□□□□ -1.22
NPIPA3F8WFD2 CTNNA2-218ENST00000541047 2870 ntTSL 1 (best) BASIC7.45□□□□□ -1.22
NPIPA3F8WFD2 PPIH-201ENST00000304979 752 ntAPPRIS P1 TSL 1 (best) BASIC7.45□□□□□ -1.22
NPIPA3F8WFD2 CSNK2B-202ENST00000375866 936 ntAPPRIS P1 TSL 5 BASIC7.45□□□□□ -1.22
NPIPA3F8WFD2 TIMD4-202ENST00000406964 581 ntTSL 2 BASIC7.45□□□□□ -1.22
NPIPA3F8WFD2 GHRHR-204ENST00000409316 1292 ntTSL 1 (best) BASIC7.45□□□□□ -1.22
NPIPA3F8WFD2 LINC00676-201ENST00000416090 474 ntTSL 5 BASIC7.45□□□□□ -1.22
NPIPA3F8WFD2 AP000317.1-201ENST00000427022 805 ntTSL 3 BASIC7.45□□□□□ -1.22
NPIPA3F8WFD2 AC016734.1-201ENST00000436998 654 ntBASIC7.45□□□□□ -1.22
NPIPA3F8WFD2 CAMTA1-210ENST00000476864 714 ntTSL 1 (best) BASIC7.45□□□□□ -1.22
NPIPA3F8WFD2 AC055758.2-202ENST00000482351 624 ntTSL 2 BASIC7.45□□□□□ -1.22
NPIPA3F8WFD2 RPS3P7-201ENST00000488662 726 ntBASIC7.45□□□□□ -1.22
NPIPA3F8WFD2 RPL4P1-201ENST00000496596 1278 ntBASIC7.45□□□□□ -1.22
NPIPA3F8WFD2 HEXB-205ENST00000509579 806 ntTSL 2 BASIC7.45□□□□□ -1.22
NPIPA3F8WFD2 AC022639.1-201ENST00000523191 573 ntTSL 4 BASIC7.45□□□□□ -1.22
NPIPA3F8WFD2 AC004672.2-201ENST00000537181 574 ntTSL 2 BASIC7.45□□□□□ -1.22
NPIPA3F8WFD2 AC004241.1-203ENST00000552502 460 ntTSL 3 BASIC7.45□□□□□ -1.22
NPIPA3F8WFD2 ANP32BP1-201ENST00000564205 1297 ntBASIC7.45□□□□□ -1.22
NPIPA3F8WFD2 SNURF-202ENST00000577949 650 ntAPPRIS P1 TSL 2 BASIC7.45□□□□□ -1.22
NPIPA3F8WFD2 MIR3680-2-201ENST00000578247 87 ntBASIC7.45□□□□□ -1.22
NPIPA3F8WFD2 MIR3680-1-201ENST00000581433 87 ntBASIC7.45□□□□□ -1.22
NPIPA3F8WFD2 ZNF714-203ENST00000596053 800 ntTSL 2 BASIC7.45□□□□□ -1.22
NPIPA3F8WFD2 AC005261.1-201ENST00000601567 712 ntTSL 2 BASIC7.45□□□□□ -1.22
NPIPA3F8WFD2 AL358335.3-201ENST00000604678 327 ntBASIC7.45□□□□□ -1.22
NPIPA3F8WFD2 AC104117.5-201ENST00000606195 547 ntBASIC7.45□□□□□ -1.22
NPIPA3F8WFD2 AL133520.1-201ENST00000610430 700 ntBASIC7.45□□□□□ -1.22
NPIPA3F8WFD2 AC090373.1-201ENST00000623955 603 ntBASIC7.45□□□□□ -1.22
NPIPA3F8WFD2 LINC02034-201ENST00000635368 760 ntTSL 5 BASIC7.45□□□□□ -1.22
NPIPA3F8WFD2 CCDC196-207ENST00000636229 1107 ntAPPRIS P1 TSL 5 BASIC7.45□□□□□ -1.22
NPIPA3F8WFD2 MIR3120-201ENST00000636555 81 ntBASIC7.45□□□□□ -1.22
NPIPA3F8WFD2 HELLS-206ENST00000394045 2699 ntTSL 1 (best) BASIC7.45□□□□□ -1.22
NPIPA3F8WFD2 LEAP2-201ENST00000296877 2207 ntAPPRIS P1 TSL 1 (best) BASIC7.45□□□□□ -1.22
NPIPA3F8WFD2 DPY19L3-202ENST00000392250 5998 ntAPPRIS P1 TSL 5 BASIC7.45□□□□□ -1.22
NPIPA3F8WFD2 NCBP3-201ENST00000389005 12770 ntAPPRIS P1 TSL 5 BASIC7.45□□□□□ -1.22
NPIPA3F8WFD2 PARP9-201ENST00000360356 3198 ntAPPRIS P3 TSL 1 (best) BASIC7.45□□□□□ -1.22
NPIPA3F8WFD2 STAMBP-201ENST00000339566 6277 ntAPPRIS P1 TSL 5 BASIC7.45□□□□□ -1.22
NPIPA3F8WFD2 LINC00934-202ENST00000630357 2291 ntTSL 2 BASIC7.45□□□□□ -1.22
NPIPA3F8WFD2 AF228730.7-203ENST00000641436 1804 ntBASIC7.45□□□□□ -1.22
NPIPA3F8WFD2 ETV1-210ENST00000430479 6740 ntAPPRIS P1 TSL 1 (best) BASIC7.45□□□□□ -1.22
NPIPA3F8WFD2 TTTY15-202ENST00000440408 5284 ntTSL 1 (best) BASIC7.45□□□□□ -1.22
NPIPA3F8WFD2 NELL1-201ENST00000298925 3329 ntAPPRIS ALT2 TSL 2 BASIC7.45□□□□□ -1.22
NPIPA3F8WFD2 LINC00547-201ENST00000612438 3314 ntTSL 2 BASIC7.45□□□□□ -1.22
NPIPA3F8WFD2 AC131392.2-201ENST00000505635 4332 ntBASIC7.45□□□□□ -1.22
NPIPA3F8WFD2 ZNF639-201ENST00000326361 6064 ntAPPRIS P1 TSL 1 (best) BASIC7.45□□□□□ -1.22
Retrieved 100 of 98,524 protein–RNA pairs in 59.1 ms