Protein–RNA interactions for Protein: Q9Y5H4

PCDHGA1, Protocadherin gamma-A1, humanhuman

Predictions only

Length 931 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGA1Q9Y5H4 AC092384.1-201ENST00000378347 1812 ntTSL 2 BASIC19.53■□□□□ 0.72
PCDHGA1Q9Y5H4 RHBDD2-201ENST00000006777 1802 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
PCDHGA1Q9Y5H4 RALB-201ENST00000272519 2344 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
PCDHGA1Q9Y5H4 LHX2-201ENST00000373615 2554 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
PCDHGA1Q9Y5H4 PHF2-201ENST00000359246 5569 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
PCDHGA1Q9Y5H4 SLC39A4-202ENST00000301305 2174 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
PCDHGA1Q9Y5H4 CADM1-201ENST00000331581 1766 ntTSL 1 (best) BASIC19.53■□□□□ 0.72
PCDHGA1Q9Y5H4 OXT-201ENST00000217386 513 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
PCDHGA1Q9Y5H4 HCRT-201ENST00000293330 577 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
PCDHGA1Q9Y5H4 WNT1-201ENST00000293549 1185 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
PCDHGA1Q9Y5H4 KRT18P35-201ENST00000510488 1269 ntBASIC19.53■□□□□ 0.72
PCDHGA1Q9Y5H4 FOSL1-204ENST00000532401 1132 ntTSL 2 BASIC19.53■□□□□ 0.72
PCDHGA1Q9Y5H4 AC133065.2-201ENST00000573379 2147 ntTSL 2 BASIC19.53■□□□□ 0.72
PCDHGA1Q9Y5H4 FXYD1-204ENST00000588081 645 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
PCDHGA1Q9Y5H4 DCAKD-205ENST00000588499 990 ntAPPRIS P1 TSL 2 BASIC19.53■□□□□ 0.72
PCDHGA1Q9Y5H4 AC145285.6-201ENST00000604632 637 ntBASIC19.53■□□□□ 0.72
PCDHGA1Q9Y5H4 TRAPPC6A-201ENST00000006275 805 ntTSL 1 (best) BASIC19.53■□□□□ 0.72
PCDHGA1Q9Y5H4 MON1A-203ENST00000455683 1617 ntAPPRIS ALT2 TSL 1 (best) BASIC19.53■□□□□ 0.72
PCDHGA1Q9Y5H4 THOC6-209ENST00000575576 1360 ntTSL 5 BASIC19.53■□□□□ 0.72
PCDHGA1Q9Y5H4 ASF1B-201ENST00000263382 2059 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
PCDHGA1Q9Y5H4 BTBD1-202ENST00000379403 1467 ntTSL 5 BASIC19.53■□□□□ 0.72
PCDHGA1Q9Y5H4 PACSIN3-201ENST00000298838 1843 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
PCDHGA1Q9Y5H4 MAGED2-206ENST00000375068 2189 ntAPPRIS P2 TSL 1 (best) BASIC19.53■□□□□ 0.72
PCDHGA1Q9Y5H4 HADH-209ENST00000603302 2032 ntTSL 1 (best) BASIC19.52■□□□□ 0.72
PCDHGA1Q9Y5H4 SMURF1-201ENST00000361125 5737 ntTSL 1 (best) BASIC19.52■□□□□ 0.72
PCDHGA1Q9Y5H4 FSCN2-202ENST00000417245 1665 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
PCDHGA1Q9Y5H4 SRI-203ENST00000419179 1307 ntTSL 2 BASIC19.52■□□□□ 0.72
PCDHGA1Q9Y5H4 POLDIP2-202ENST00000618887 1524 ntTSL 2 BASIC19.52■□□□□ 0.72
PCDHGA1Q9Y5H4 HAS1-201ENST00000222115 2087 ntAPPRIS P3 TSL 1 (best) BASIC19.52■□□□□ 0.72
PCDHGA1Q9Y5H4 SRP68-201ENST00000307877 2649 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
PCDHGA1Q9Y5H4 TANGO2-201ENST00000327374 2273 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
PCDHGA1Q9Y5H4 MRGPRG-201ENST00000332314 870 ntAPPRIS P1 BASIC19.52■□□□□ 0.72
PCDHGA1Q9Y5H4 ANK1-206ENST00000348036 622 ntTSL 1 (best) BASIC19.52■□□□□ 0.72
PCDHGA1Q9Y5H4 CTNNBIP1-204ENST00000400904 1206 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
PCDHGA1Q9Y5H4 AC009487.1-202ENST00000437683 402 ntTSL 2 BASIC19.52■□□□□ 0.72
PCDHGA1Q9Y5H4 HES2-206ENST00000489730 730 ntTSL 2 BASIC19.52■□□□□ 0.72
PCDHGA1Q9Y5H4 PACRGL-207ENST00000502938 810 ntTSL 4 BASIC19.52■□□□□ 0.72
PCDHGA1Q9Y5H4 AC023632.3-201ENST00000521633 145 ntBASIC19.52■□□□□ 0.72
PCDHGA1Q9Y5H4 AC073195.1-201ENST00000607241 877 ntBASIC19.52■□□□□ 0.72
PCDHGA1Q9Y5H4 AC018445.1-201ENST00000621571 568 ntTSL 4 BASIC19.52■□□□□ 0.72
PCDHGA1Q9Y5H4 AL590627.2-201ENST00000637510 144 ntTSL 5 BASIC19.52■□□□□ 0.72
PCDHGA1Q9Y5H4 PTGES2-202ENST00000338961 2331 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.71
PCDHGA1Q9Y5H4 RGS7-204ENST00000366565 2494 ntAPPRIS P3 TSL 1 (best) BASIC19.51■□□□□ 0.71
PCDHGA1Q9Y5H4 AC007743.1-203ENST00000447423 1623 ntTSL 2 BASIC19.51■□□□□ 0.71
PCDHGA1Q9Y5H4 BIK-201ENST00000216115 953 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
PCDHGA1Q9Y5H4 ICAM4-201ENST00000340992 1176 ntAPPRIS ALT2 TSL 1 (best) BASIC19.51■□□□□ 0.71
PCDHGA1Q9Y5H4 IFI6-202ENST00000361157 841 ntAPPRIS ALT2 TSL 1 (best) BASIC19.51■□□□□ 0.71
PCDHGA1Q9Y5H4 GPSM1-203ENST00000392944 1111 ntTSL 3 BASIC19.51■□□□□ 0.71
PCDHGA1Q9Y5H4 SELENOS-203ENST00000526049 1188 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
PCDHGA1Q9Y5H4 SLC39A13-212ENST00000531974 856 ntTSL 2 BASIC19.51■□□□□ 0.71
PCDHGA1Q9Y5H4 ANAPC11-207ENST00000572639 578 ntAPPRIS P1 TSL 3 BASIC19.51■□□□□ 0.71
PCDHGA1Q9Y5H4 RPL23AP53-202ENST00000606507 370 ntTSL 3 BASIC19.51■□□□□ 0.71
PCDHGA1Q9Y5H4 Six3os1_6.1-201ENST00000620790 196 ntBASIC19.51■□□□□ 0.71
PCDHGA1Q9Y5H4 NTAN1-211ENST00000622833 1049 ntTSL 2 BASIC19.51■□□□□ 0.71
PCDHGA1Q9Y5H4 NTAN1-212ENST00000624579 1115 ntTSL 2 BASIC19.51■□□□□ 0.71
PCDHGA1Q9Y5H4 DECR2-212ENST00000627716 352 ntTSL 2 BASIC19.51■□□□□ 0.71
PCDHGA1Q9Y5H4 ECE2-202ENST00000357474 2667 ntTSL 1 (best) BASIC19.51■□□□□ 0.71
PCDHGA1Q9Y5H4 RBM4B-203ENST00000525754 2339 ntAPPRIS P1 TSL 2 BASIC19.51■□□□□ 0.71
PCDHGA1Q9Y5H4 SCAMP3-201ENST00000302631 1446 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
PCDHGA1Q9Y5H4 TCP11-203ENST00000373974 1689 ntAPPRIS ALT2 TSL 2 BASIC19.5■□□□□ 0.71
PCDHGA1Q9Y5H4 EXOC3-AS1-202ENST00000623673 1663 ntBASIC19.5■□□□□ 0.71
PCDHGA1Q9Y5H4 MYBL2-201ENST00000217026 2639 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
PCDHGA1Q9Y5H4 MAP1LC3A-201ENST00000360668 1574 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
PCDHGA1Q9Y5H4 KIF2A-202ENST00000401507 2539 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
PCDHGA1Q9Y5H4 NBPF21P-201ENST00000425093 1451 ntBASIC19.5■□□□□ 0.71
PCDHGA1Q9Y5H4 ARMC10P1-201ENST00000313754 855 ntBASIC19.5■□□□□ 0.71
PCDHGA1Q9Y5H4 AC099329.3-201ENST00000431549 602 ntAPPRIS P1 TSL 4 BASIC19.5■□□□□ 0.71
PCDHGA1Q9Y5H4 BABAM1-202ENST00000447614 930 ntAPPRIS ALT2 TSL 5 BASIC19.5■□□□□ 0.71
PCDHGA1Q9Y5H4 KCNIP3-205ENST00000468529 985 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
PCDHGA1Q9Y5H4 SUMO2-203ENST00000578238 490 ntTSL 2 BASIC19.5■□□□□ 0.71
PCDHGA1Q9Y5H4 AC005363.2-201ENST00000618631 242 ntBASIC19.5■□□□□ 0.71
PCDHGA1Q9Y5H4 BIN1-202ENST00000316724 2693 ntAPPRIS P4 TSL 1 (best) BASIC19.5■□□□□ 0.71
PCDHGA1Q9Y5H4 ST8SIA6-201ENST00000377602 2276 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
PCDHGA1Q9Y5H4 SLC2A8-203ENST00000373371 2172 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
PCDHGA1Q9Y5H4 FAM170B-201ENST00000311787 1401 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
PCDHGA1Q9Y5H4 TRIM54-202ENST00000380075 1967 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
PCDHGA1Q9Y5H4 C19orf84-202ENST00000574814 1318 ntAPPRIS P2 TSL 1 (best) BASIC19.5■□□□□ 0.71
PCDHGA1Q9Y5H4 AKT1-201ENST00000349310 2866 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
PCDHGA1Q9Y5H4 CACNG8-201ENST00000270458 8747 ntAPPRIS ALT2 TSL 1 (best) BASIC19.49■□□□□ 0.71
PCDHGA1Q9Y5H4 OLIG2-202ENST00000382357 2578 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
PCDHGA1Q9Y5H4 DGKQ-201ENST00000273814 4636 ntAPPRIS P2 TSL 1 (best) BASIC19.49■□□□□ 0.71
PCDHGA1Q9Y5H4 HUNK-201ENST00000270112 7385 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
PCDHGA1Q9Y5H4 ZNF800-208ENST00000619291 2099 ntTSL 5 BASIC19.49■□□□□ 0.71
PCDHGA1Q9Y5H4 H2AFY-217ENST00000511689 2789 ntAPPRIS P4 TSL 1 (best) BASIC19.49■□□□□ 0.71
PCDHGA1Q9Y5H4 PTCRA-201ENST00000304672 1080 ntAPPRIS P3 TSL 1 (best) BASIC19.49■□□□□ 0.71
PCDHGA1Q9Y5H4 CDKN1B-202ENST00000396340 897 ntTSL 3 BASIC19.49■□□□□ 0.71
PCDHGA1Q9Y5H4 CCK-203ENST00000434608 747 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
PCDHGA1Q9Y5H4 PTCRA-202ENST00000441198 1005 ntTSL 1 (best) BASIC19.49■□□□□ 0.71
PCDHGA1Q9Y5H4 PTCRA-203ENST00000446507 759 ntTSL 1 (best) BASIC19.49■□□□□ 0.71
PCDHGA1Q9Y5H4 AL109797.1-201ENST00000452501 835 ntTSL 2 BASIC19.49■□□□□ 0.71
PCDHGA1Q9Y5H4 AL049597.2-201ENST00000565575 961 ntBASIC19.49■□□□□ 0.71
PCDHGA1Q9Y5H4 MCRIP1-206ENST00000573478 1123 ntTSL 2 BASIC19.49■□□□□ 0.71
PCDHGA1Q9Y5H4 AL590094.1-202ENST00000634619 1131 ntTSL 5 BASIC19.49■□□□□ 0.71
PCDHGA1Q9Y5H4 GLDC-219ENST00000640208 420 ntTSL 2 BASIC19.49■□□□□ 0.71
PCDHGA1Q9Y5H4 DDAH1-205ENST00000539042 1519 ntAPPRIS P1 TSL 5 BASIC19.49■□□□□ 0.71
PCDHGA1Q9Y5H4 SLC52A2-211ENST00000532887 2147 ntAPPRIS P1 TSL 5 BASIC19.49■□□□□ 0.71
PCDHGA1Q9Y5H4 ABHD6-201ENST00000295962 2393 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
PCDHGA1Q9Y5H4 POU4F1-201ENST00000377208 4547 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
PCDHGA1Q9Y5H4 SUN1-220ENST00000457378 1309 ntTSL 1 (best) BASIC19.49■□□□□ 0.71
PCDHGA1Q9Y5H4 TMPRSS5-202ENST00000536856 1811 ntTSL 1 (best) BASIC19.48■□□□□ 0.71
Retrieved 100 of 98,524 protein–RNA pairs in 17.3 ms