Protein–RNA interactions for Protein: Q9Y5H0

PCDHGA3, Protocadherin gamma-A3, humanhuman

Predictions only

Length 932 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGA3Q9Y5H0 ALG5-202ENST00000443765 1119 ntTSL 2 BASIC19.64■□□□□ 0.73
PCDHGA3Q9Y5H0 AC113189.1-201ENST00000570444 327 ntTSL 3 BASIC19.64■□□□□ 0.73
PCDHGA3Q9Y5H0 FFAR3-202ENST00000594310 1182 ntAPPRIS P1 BASIC19.64■□□□□ 0.73
PCDHGA3Q9Y5H0 ATRAID-208ENST00000611786 1256 ntTSL 1 (best) BASIC19.64■□□□□ 0.73
PCDHGA3Q9Y5H0 SH3GLB2-202ENST00000372559 1365 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
PCDHGA3Q9Y5H0 ASB18-201ENST00000409749 1401 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
PCDHGA3Q9Y5H0 CCNG2-204ENST00000502280 1459 ntAPPRIS P1 TSL 2 BASIC19.64■□□□□ 0.73
PCDHGA3Q9Y5H0 CHRNA10-204ENST00000534359 1474 ntTSL 1 (best) BASIC19.64■□□□□ 0.73
PCDHGA3Q9Y5H0 SLC2A7-201ENST00000400906 1539 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
PCDHGA3Q9Y5H0 CCDC106-207ENST00000591578 1592 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
PCDHGA3Q9Y5H0 CYB5R2-212ENST00000533558 1658 ntAPPRIS P1 TSL 2 BASIC19.64■□□□□ 0.73
PCDHGA3Q9Y5H0 CHRNA7-203ENST00000454250 2093 ntAPPRIS ALT2 TSL 2 BASIC19.64■□□□□ 0.73
PCDHGA3Q9Y5H0 DMRTA2-202ENST00000418121 2840 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
PCDHGA3Q9Y5H0 GRK3-203ENST00000619906 2873 ntTSL 5 BASIC19.64■□□□□ 0.73
PCDHGA3Q9Y5H0 MARK2-202ENST00000361128 3004 ntAPPRIS ALT2 TSL 1 (best) BASIC19.64■□□□□ 0.73
PCDHGA3Q9Y5H0 LRRC14-201ENST00000292524 5328 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
PCDHGA3Q9Y5H0 AP003356.1-202ENST00000517910 2770 ntTSL 2 BASIC19.63■□□□□ 0.73
PCDHGA3Q9Y5H0 SLC22A17-202ENST00000354772 2238 ntAPPRIS ALT2 TSL 1 (best) BASIC19.63■□□□□ 0.73
PCDHGA3Q9Y5H0 ATP8A1-207ENST00000510289 2238 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
PCDHGA3Q9Y5H0 SH2B2-202ENST00000536178 2113 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
PCDHGA3Q9Y5H0 C12orf76-203ENST00000546651 1755 ntTSL 2 BASIC19.63■□□□□ 0.73
PCDHGA3Q9Y5H0 NXN-202ENST00000537628 1340 ntTSL 3 BASIC19.63■□□□□ 0.73
PCDHGA3Q9Y5H0 RBP4-201ENST00000371464 1068 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
PCDHGA3Q9Y5H0 PUSL1-201ENST00000379031 1287 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
PCDHGA3Q9Y5H0 DNPH1-202ENST00000393987 796 ntTSL 2 BASIC19.63■□□□□ 0.73
PCDHGA3Q9Y5H0 AL596275.1-201ENST00000423464 877 ntBASIC19.63■□□□□ 0.73
PCDHGA3Q9Y5H0 HES2-205ENST00000487437 968 ntTSL 3 BASIC19.63■□□□□ 0.73
PCDHGA3Q9Y5H0 USP36-216ENST00000589424 970 ntTSL 5 BASIC19.63■□□□□ 0.73
PCDHGA3Q9Y5H0 AL359736.2-201ENST00000621992 437 ntBASIC19.63■□□□□ 0.73
PCDHGA3Q9Y5H0 CD24-208ENST00000622315 825 ntAPPRIS ALT2 TSL 2 BASIC19.63■□□□□ 0.73
PCDHGA3Q9Y5H0 STRN4-202ENST00000391910 3628 ntAPPRIS ALT1 TSL 5 BASIC19.63■□□□□ 0.73
PCDHGA3Q9Y5H0 AL035252.2-201ENST00000454676 3168 ntTSL 2 BASIC19.63■□□□□ 0.73
PCDHGA3Q9Y5H0 C19orf35-201ENST00000342063 2574 ntAPPRIS P1 TSL 2 BASIC19.63■□□□□ 0.73
PCDHGA3Q9Y5H0 SLC46A3-202ENST00000380814 2121 ntAPPRIS ALT1 TSL 1 (best) BASIC19.63■□□□□ 0.73
PCDHGA3Q9Y5H0 ALG9-215ENST00000616540 2069 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
PCDHGA3Q9Y5H0 ROR1-201ENST00000371079 5832 ntAPPRIS P2 TSL 1 (best) BASIC19.63■□□□□ 0.73
PCDHGA3Q9Y5H0 SPN-202ENST00000395389 1935 ntAPPRIS P2 TSL 1 (best) BASIC19.63■□□□□ 0.73
PCDHGA3Q9Y5H0 RELL2-207ENST00000521367 1780 ntTSL 5 BASIC19.62■□□□□ 0.73
PCDHGA3Q9Y5H0 SMPD2-201ENST00000258052 1645 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
PCDHGA3Q9Y5H0 FBXO6-201ENST00000376753 1520 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
PCDHGA3Q9Y5H0 GOLGA4-212ENST00000617480 1545 ntTSL 5 BASIC19.62■□□□□ 0.73
PCDHGA3Q9Y5H0 PRSS3-202ENST00000361005 966 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
PCDHGA3Q9Y5H0 FLYWCH2-202ENST00000396958 1036 ntAPPRIS P2 TSL 1 (best) BASIC19.62■□□□□ 0.73
PCDHGA3Q9Y5H0 DUSP15-205ENST00000398084 1256 ntTSL 5 BASIC19.62■□□□□ 0.73
PCDHGA3Q9Y5H0 MTFP1-203ENST00000407550 912 ntTSL 2 BASIC19.62■□□□□ 0.73
PCDHGA3Q9Y5H0 PEX26-203ENST00000428061 815 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
PCDHGA3Q9Y5H0 NT5C3B-203ENST00000435506 975 ntAPPRIS P1 TSL 5 BASIC19.62■□□□□ 0.73
PCDHGA3Q9Y5H0 AC073111.3-201ENST00000478789 635 ntAPPRIS P1 TSL 3 BASIC19.62■□□□□ 0.73
PCDHGA3Q9Y5H0 RARRES1-204ENST00000479756 839 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
PCDHGA3Q9Y5H0 AC008550.1-201ENST00000511500 884 ntBASIC19.62■□□□□ 0.73
PCDHGA3Q9Y5H0 AC073912.1-201ENST00000546264 587 ntTSL 3 BASIC19.62■□□□□ 0.73
PCDHGA3Q9Y5H0 LINC00304-202ENST00000562248 1095 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
PCDHGA3Q9Y5H0 SLC35A2-213ENST00000635015 1008 ntTSL 2 BASIC19.62■□□□□ 0.73
PCDHGA3Q9Y5H0 PXYLP1-203ENST00000502783 2066 ntTSL 2 BASIC19.62■□□□□ 0.73
PCDHGA3Q9Y5H0 DSCAM-201ENST00000400454 8552 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
PCDHGA3Q9Y5H0 HERC2P8-204ENST00000567073 1988 ntTSL 5 BASIC19.62■□□□□ 0.73
PCDHGA3Q9Y5H0 HSF2BP-201ENST00000291560 1899 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
PCDHGA3Q9Y5H0 GTPBP3-222ENST00000600625 2493 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
PCDHGA3Q9Y5H0 RAX-202ENST00000334889 3197 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
PCDHGA3Q9Y5H0 EXOC3L2-202ENST00000413988 2964 ntAPPRIS P1 TSL 5 BASIC19.62■□□□□ 0.73
PCDHGA3Q9Y5H0 AC092368.3-202ENST00000574180 1591 ntBASIC19.61■□□□□ 0.73
PCDHGA3Q9Y5H0 GNB3-201ENST00000229264 1923 ntAPPRIS P3 TSL 5 BASIC19.61■□□□□ 0.73
PCDHGA3Q9Y5H0 UBR2-203ENST00000372903 2423 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
PCDHGA3Q9Y5H0 PDCD2-203ENST00000443345 1897 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
PCDHGA3Q9Y5H0 PTPMT1-202ENST00000326674 768 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
PCDHGA3Q9Y5H0 MCAT-202ENST00000327555 1134 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
PCDHGA3Q9Y5H0 LRRC26-201ENST00000371542 1209 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
PCDHGA3Q9Y5H0 C6orf48-205ENST00000375640 1053 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
PCDHGA3Q9Y5H0 AGTRAP-203ENST00000376629 1100 ntAPPRIS ALT2 TSL 1 (best) BASIC19.61■□□□□ 0.73
PCDHGA3Q9Y5H0 ZDHHC20-204ENST00000415724 1296 ntAPPRIS ALT2 TSL 5 BASIC19.61■□□□□ 0.73
PCDHGA3Q9Y5H0 AL365295.1-202ENST00000456100 562 ntTSL 4 BASIC19.61■□□□□ 0.73
PCDHGA3Q9Y5H0 RNF121-214ENST00000533380 870 ntTSL 3 BASIC19.61■□□□□ 0.73
PCDHGA3Q9Y5H0 NDUFS3-212ENST00000534208 583 ntTSL 4 BASIC19.61■□□□□ 0.73
PCDHGA3Q9Y5H0 AC005225.2-202ENST00000617980 408 ntTSL 4 BASIC19.61■□□□□ 0.73
PCDHGA3Q9Y5H0 HHIPL1-202ENST00000357223 2241 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
PCDHGA3Q9Y5H0 TM7SF2-201ENST00000279263 1722 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
PCDHGA3Q9Y5H0 ANKLE2-201ENST00000357997 4646 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
PCDHGA3Q9Y5H0 TMEM129-201ENST00000303277 2678 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
PCDHGA3Q9Y5H0 TERF1-202ENST00000276603 1677 ntAPPRIS P4 TSL 1 (best) BASIC19.61■□□□□ 0.73
PCDHGA3Q9Y5H0 B4GALNT1-203ENST00000449184 1633 ntTSL 2 BASIC19.61■□□□□ 0.73
PCDHGA3Q9Y5H0 OLA1-204ENST00000409546 2071 ntTSL 5 BASIC19.61■□□□□ 0.73
PCDHGA3Q9Y5H0 LINC01089-202ENST00000429892 1521 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
PCDHGA3Q9Y5H0 CYP21A1P-202ENST00000354927 1481 ntBASIC19.6■□□□□ 0.73
PCDHGA3Q9Y5H0 MOK-226ENST00000522874 1890 ntAPPRIS ALT2 TSL 5 BASIC19.6■□□□□ 0.73
PCDHGA3Q9Y5H0 AC244015.2-201ENST00000616358 1861 ntBASIC19.6■□□□□ 0.73
PCDHGA3Q9Y5H0 MAFF-204ENST00000426621 2216 ntAPPRIS P1 TSL 4 BASIC19.6■□□□□ 0.73
PCDHGA3Q9Y5H0 BRPF3-202ENST00000357641 6052 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
PCDHGA3Q9Y5H0 ME2-202ENST00000382927 2492 ntTSL 1 (best) BASIC19.6■□□□□ 0.73
PCDHGA3Q9Y5H0 TTYH1-201ENST00000301194 2088 ntAPPRIS ALT1 TSL 1 (best) BASIC19.6■□□□□ 0.73
PCDHGA3Q9Y5H0 PLSCR3-201ENST00000324822 1689 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
PCDHGA3Q9Y5H0 TNFAIP8L3-202ENST00000637513 2002 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
PCDHGA3Q9Y5H0 SYNGR1-201ENST00000216155 497 ntTSL 3 BASIC19.6■□□□□ 0.73
PCDHGA3Q9Y5H0 MRPL15-201ENST00000260102 1147 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
PCDHGA3Q9Y5H0 GPR35-203ENST00000407714 1258 ntAPPRIS P3 TSL 1 (best) BASIC19.6■□□□□ 0.73
PCDHGA3Q9Y5H0 GPX1-202ENST00000419783 1146 ntAPPRIS P2 TSL 1 (best) BASIC19.6■□□□□ 0.73
PCDHGA3Q9Y5H0 KRT17P3-201ENST00000420566 1262 ntBASIC19.6■□□□□ 0.73
PCDHGA3Q9Y5H0 AC226101.2-201ENST00000458252 747 ntTSL 2 BASIC19.6■□□□□ 0.73
PCDHGA3Q9Y5H0 OCIAD2-205ENST00000508632 1163 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
PCDHGA3Q9Y5H0 RHOD-202ENST00000532559 538 ntTSL 3 BASIC19.6■□□□□ 0.73
PCDHGA3Q9Y5H0 JPT2-204ENST00000561516 1065 ntTSL 1 (best) BASIC19.6■□□□□ 0.73
Retrieved 100 of 98,524 protein–RNA pairs in 28.9 ms