Protein–RNA interactions for Protein: Q9Y4K3

TRAF6, TNF receptor-associated factor 6, humanhuman

Predictions only

Length 522 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAF6Q9Y4K3 PLCL1-201ENST00000428675 5125 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
TRAF6Q9Y4K3 C17orf62-204ENST00000437807 2242 ntAPPRIS P1 TSL 2 BASIC19.7■□□□□ 0.74
TRAF6Q9Y4K3 AK1-201ENST00000223836 736 ntTSL 3 BASIC19.7■□□□□ 0.74
TRAF6Q9Y4K3 JSRP1-201ENST00000300961 1138 ntAPPRIS P1 TSL 2 BASIC19.7■□□□□ 0.74
TRAF6Q9Y4K3 BCKDHB-203ENST00000369760 743 ntTSL 3 BASIC19.7■□□□□ 0.74
TRAF6Q9Y4K3 AC093627.4-202ENST00000479592 591 ntTSL 4 BASIC19.7■□□□□ 0.74
TRAF6Q9Y4K3 SEC23A-213ENST00000557280 561 ntTSL 4 BASIC19.7■□□□□ 0.74
TRAF6Q9Y4K3 TRAPPC2L-213ENST00000567895 854 ntTSL 3 BASIC19.7■□□□□ 0.74
TRAF6Q9Y4K3 AC243732.1-201ENST00000612648 864 ntBASIC19.7■□□□□ 0.74
TRAF6Q9Y4K3 FGF8-207ENST00000618991 856 ntTSL 3 BASIC19.7■□□□□ 0.74
TRAF6Q9Y4K3 UBXN11-201ENST00000314675 2254 ntAPPRIS ALT2 TSL 2 BASIC19.7■□□□□ 0.74
TRAF6Q9Y4K3 MTMR14-201ENST00000296003 2494 ntAPPRIS P4 TSL 1 (best) BASIC19.7■□□□□ 0.74
TRAF6Q9Y4K3 ZNF12-201ENST00000342651 2921 ntAPPRIS ALT2 TSL 2 BASIC19.7■□□□□ 0.74
TRAF6Q9Y4K3 SCYL2-201ENST00000360820 5779 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
TRAF6Q9Y4K3 ARL6IP4-204ENST00000392435 1339 ntAPPRIS ALT2 TSL 1 (best) BASIC19.7■□□□□ 0.74
TRAF6Q9Y4K3 ADAP1-216ENST00000539900 2178 ntTSL 2 BASIC19.7■□□□□ 0.74
TRAF6Q9Y4K3 IRAK3-203ENST00000545837 1579 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
TRAF6Q9Y4K3 BHLHE22-201ENST00000321870 3262 ntAPPRIS P1 BASIC19.7■□□□□ 0.74
TRAF6Q9Y4K3 C2orf54-201ENST00000307486 2017 ntAPPRIS ALT2 TSL 1 (best) BASIC19.69■□□□□ 0.74
TRAF6Q9Y4K3 RBM17P2-201ENST00000616397 1405 ntBASIC19.69■□□□□ 0.74
TRAF6Q9Y4K3 AC069431.1-201ENST00000488882 1877 ntTSL 5 BASIC19.69■□□□□ 0.74
TRAF6Q9Y4K3 UTP4-201ENST00000314423 2322 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
TRAF6Q9Y4K3 COX5B-201ENST00000258424 712 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
TRAF6Q9Y4K3 ACYP2-201ENST00000303536 789 ntTSL 2 BASIC19.69■□□□□ 0.74
TRAF6Q9Y4K3 IFI6-202ENST00000361157 841 ntAPPRIS ALT2 TSL 1 (best) BASIC19.69■□□□□ 0.74
TRAF6Q9Y4K3 PARD6B-202ENST00000396039 522 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
TRAF6Q9Y4K3 AC007322.3-201ENST00000426526 701 ntBASIC19.69■□□□□ 0.74
TRAF6Q9Y4K3 AC092468.1-201ENST00000491321 562 ntTSL 4 BASIC19.69■□□□□ 0.74
TRAF6Q9Y4K3 AC021660.2-201ENST00000502999 388 ntTSL 3 BASIC19.69■□□□□ 0.74
TRAF6Q9Y4K3 TESC-206ENST00000541210 936 ntTSL 3 BASIC19.69■□□□□ 0.74
TRAF6Q9Y4K3 HSD17B14-204ENST00000599157 991 ntTSL 3 BASIC19.69■□□□□ 0.74
TRAF6Q9Y4K3 AL138963.3-201ENST00000610057 588 ntTSL 4 BASIC19.69■□□□□ 0.74
TRAF6Q9Y4K3 SLC35A3-222ENST00000640715 1989 ntTSL 5 BASIC19.69■□□□□ 0.74
TRAF6Q9Y4K3 LRRC14-201ENST00000292524 5328 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
TRAF6Q9Y4K3 PDE4DIP-214ENST00000479408 2746 ntTSL 5 BASIC19.69■□□□□ 0.74
TRAF6Q9Y4K3 SLC35A3-205ENST00000465289 5696 ntAPPRIS P1 TSL 5 BASIC19.69■□□□□ 0.74
TRAF6Q9Y4K3 ARID4B-203ENST00000366603 5946 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
TRAF6Q9Y4K3 SPOCK2-209ENST00000536168 1824 ntAPPRIS ALT2 TSL 5 BASIC19.69■□□□□ 0.74
TRAF6Q9Y4K3 RNF135-205ENST00000535306 2098 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
TRAF6Q9Y4K3 ARHGAP22-204ENST00000417247 2340 ntTSL 2 BASIC19.69■□□□□ 0.74
TRAF6Q9Y4K3 RMND5A-201ENST00000283632 6301 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
TRAF6Q9Y4K3 SYT5-202ENST00000537500 2612 ntAPPRIS P1 TSL 2 BASIC19.69■□□□□ 0.74
TRAF6Q9Y4K3 ZNF324B-202ENST00000545523 2368 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
TRAF6Q9Y4K3 ATP11C-203ENST00000370557 6924 ntAPPRIS ALT2 TSL 5 BASIC19.69■□□□□ 0.74
TRAF6Q9Y4K3 LRRC25-202ENST00000595840 1924 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
TRAF6Q9Y4K3 DPP3P2-201ENST00000416030 1696 ntBASIC19.68■□□□□ 0.74
TRAF6Q9Y4K3 USP45-202ENST00000329966 1444 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
TRAF6Q9Y4K3 ZNF821-211ENST00000564134 1748 ntTSL 5 BASIC19.68■□□□□ 0.74
TRAF6Q9Y4K3 PGPEP1L-202ENST00000535714 1483 ntTSL 2 BASIC19.68■□□□□ 0.74
TRAF6Q9Y4K3 DIAPH1-203ENST00000389057 5762 ntAPPRIS ALT2 TSL 5 BASIC19.68■□□□□ 0.74
TRAF6Q9Y4K3 KLF2-201ENST00000248071 2018 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
TRAF6Q9Y4K3 DALRD3-205ENST00000440857 2014 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
TRAF6Q9Y4K3 CRMP1-201ENST00000324989 3146 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
TRAF6Q9Y4K3 MTUS2-202ENST00000380808 1793 ntAPPRIS P3 TSL 1 (best) BASIC19.68■□□□□ 0.74
TRAF6Q9Y4K3 SLC2A7-201ENST00000400906 1539 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
TRAF6Q9Y4K3 PDLIM3-212ENST00000620787 2352 ntTSL 4 BASIC19.68■□□□□ 0.74
TRAF6Q9Y4K3 TMEM54-202ENST00000373463 999 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
TRAF6Q9Y4K3 AC123595.1-201ENST00000440769 1046 ntBASIC19.68■□□□□ 0.74
TRAF6Q9Y4K3 PRSS22-203ENST00000571228 1037 ntTSL 2 BASIC19.68■□□□□ 0.74
TRAF6Q9Y4K3 MRM1-204ENST00000614766 1857 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
TRAF6Q9Y4K3 NFE2L1-204ENST00000536222 2172 ntTSL 2 BASIC19.68■□□□□ 0.74
TRAF6Q9Y4K3 LMO4-202ENST00000370544 5405 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
TRAF6Q9Y4K3 PNKP-214ENST00000600573 1602 ntTSL 5 BASIC19.68■□□□□ 0.74
TRAF6Q9Y4K3 NAP1L4-212ENST00000526115 1941 ntTSL 2 BASIC19.68■□□□□ 0.74
TRAF6Q9Y4K3 MSANTD1-203ENST00000507492 2289 ntAPPRIS ALT2 TSL 1 (best) BASIC19.68■□□□□ 0.74
TRAF6Q9Y4K3 HOXA11-201ENST00000006015 2295 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
TRAF6Q9Y4K3 ARNTL2-204ENST00000395901 1954 ntAPPRIS ALT2 TSL 1 (best) BASIC19.68■□□□□ 0.74
TRAF6Q9Y4K3 MAML1-201ENST00000292599 5723 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
TRAF6Q9Y4K3 CNEP1R1-203ENST00000458059 2965 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
TRAF6Q9Y4K3 SDHA-201ENST00000264932 2390 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
TRAF6Q9Y4K3 DNAJC1-202ENST00000376980 2106 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
TRAF6Q9Y4K3 TGFBR1-201ENST00000374990 5720 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
TRAF6Q9Y4K3 PAQR4-203ENST00000572687 2251 ntTSL 2 BASIC19.67■□□□□ 0.74
TRAF6Q9Y4K3 FAM167A-207ENST00000534308 1642 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
TRAF6Q9Y4K3 TERF1P2-201ENST00000583350 1212 ntBASIC19.67■□□□□ 0.74
TRAF6Q9Y4K3 CCDC88B-202ENST00000356786 4915 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
TRAF6Q9Y4K3 PCDH8-202ENST00000377942 5088 ntAPPRIS P4 TSL 1 (best) BASIC19.67■□□□□ 0.74
TRAF6Q9Y4K3 CCDC151-201ENST00000356392 2107 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
TRAF6Q9Y4K3 SPINT2-202ENST00000454580 1367 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
TRAF6Q9Y4K3 INSM2-201ENST00000307169 3013 ntAPPRIS P1 BASIC19.67■□□□□ 0.74
TRAF6Q9Y4K3 STIM2-211ENST00000639195 2265 ntAPPRIS ALT2 TSL 1 (best) BASIC19.67■□□□□ 0.74
TRAF6Q9Y4K3 KMT2B-201ENST00000420124 8469 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
TRAF6Q9Y4K3 UHRF1-203ENST00000615884 2651 ntAPPRIS P1 TSL 2 BASIC19.66■□□□□ 0.74
TRAF6Q9Y4K3 CPNE9-205ENST00000613455 1742 ntTSL 5 BASIC19.66■□□□□ 0.74
TRAF6Q9Y4K3 DESI2-201ENST00000263831 859 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
TRAF6Q9Y4K3 COX20-201ENST00000366528 568 ntTSL 2 BASIC19.66■□□□□ 0.74
TRAF6Q9Y4K3 JTB-203ENST00000368589 1216 ntTSL 2 BASIC19.66■□□□□ 0.74
TRAF6Q9Y4K3 GABARAPL2-205ENST00000568455 646 ntTSL 3 BASIC19.66■□□□□ 0.74
TRAF6Q9Y4K3 SLC7A5P1-201ENST00000568957 537 ntBASIC19.66■□□□□ 0.74
TRAF6Q9Y4K3 FBXO27-201ENST00000292853 2330 ntAPPRIS P2 TSL 1 (best) BASIC19.66■□□□□ 0.74
TRAF6Q9Y4K3 GLI4-201ENST00000340042 1341 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
TRAF6Q9Y4K3 PCBP3-203ENST00000400308 1911 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
TRAF6Q9Y4K3 ST3GAL4-217ENST00000534083 1919 ntAPPRIS ALT1 TSL 5 BASIC19.66■□□□□ 0.74
TRAF6Q9Y4K3 MEF2B-203ENST00000410050 1429 ntTSL 5 BASIC19.66■□□□□ 0.74
TRAF6Q9Y4K3 EPHA10-202ENST00000373048 5425 ntAPPRIS P2 TSL 5 BASIC19.66■□□□□ 0.74
TRAF6Q9Y4K3 P2RX2-201ENST00000343948 1494 ntAPPRIS P4 TSL 1 (best) BASIC19.66■□□□□ 0.74
TRAF6Q9Y4K3 CYP26A1-201ENST00000224356 2125 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
TRAF6Q9Y4K3 GSTM3-202ENST00000361066 1565 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
TRAF6Q9Y4K3 RTKN-201ENST00000233330 2220 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
TRAF6Q9Y4K3 WNT7B-204ENST00000410089 2202 ntTSL 5 BASIC19.66■□□□□ 0.74
Retrieved 100 of 98,524 protein–RNA pairs in 19.8 ms