Protein–RNA interactions for Protein: Q9UQ88

CDK11A, Cyclin-dependent kinase 11A, humanhuman

Predicted RBP Predictions only

Length 783 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDK11AQ9UQ88 KRT8P36-201ENST00000489121 1440 ntBASIC31.5■■■□□ 2.63
CDK11AQ9UQ88 MDFI-203ENST00000373051 1622 ntAPPRIS P1 TSL 5 BASIC31.5■■■□□ 2.63
CDK11AQ9UQ88 AGAP3-201ENST00000335367 2675 ntTSL 1 (best) BASIC31.5■■■□□ 2.63
CDK11AQ9UQ88 RAP1B-203ENST00000378985 1017 ntTSL 2 BASIC31.5■■■□□ 2.63
CDK11AQ9UQ88 GPSM1-203ENST00000392944 1111 ntTSL 3 BASIC31.5■■■□□ 2.63
CDK11AQ9UQ88 CDC42EP2-202ENST00000533419 1279 ntAPPRIS P1 TSL 3 BASIC31.5■■■□□ 2.63
CDK11AQ9UQ88 RAP1B-221ENST00000540209 1264 ntTSL 2 BASIC31.5■■■□□ 2.63
CDK11AQ9UQ88 AP003071.4-201ENST00000562276 1284 ntBASIC31.5■■■□□ 2.63
CDK11AQ9UQ88 AC068987.1-201ENST00000562996 427 ntTSL 3 BASIC31.5■■■□□ 2.63
CDK11AQ9UQ88 ELAC1-203ENST00000588577 694 ntTSL 2 BASIC31.5■■■□□ 2.63
CDK11AQ9UQ88 AL137002.2-201ENST00000639766 2238 ntTSL 5 BASIC31.5■■■□□ 2.63
CDK11AQ9UQ88 ANKRD2-201ENST00000298808 1350 ntTSL 1 (best) BASIC31.5■■■□□ 2.63
CDK11AQ9UQ88 GATA6-AS1-202ENST00000583490 1788 ntTSL 2 BASIC31.5■■■□□ 2.63
CDK11AQ9UQ88 NAB1-202ENST00000409581 2360 ntAPPRIS P3 TSL 2 BASIC31.5■■■□□ 2.63
CDK11AQ9UQ88 POU5F1-201ENST00000259915 1420 ntAPPRIS P1 TSL 1 (best) BASIC31.49■■■□□ 2.63
CDK11AQ9UQ88 FBXL12-205ENST00000586651 1736 ntTSL 1 (best) BASIC31.49■■■□□ 2.63
CDK11AQ9UQ88 AC233723.2-201ENST00000623798 2106 ntBASIC31.49■■■□□ 2.63
CDK11AQ9UQ88 TMEM9B-205ENST00000534025 2083 ntAPPRIS P1 TSL 1 (best) BASIC31.49■■■□□ 2.63
CDK11AQ9UQ88 TFG-201ENST00000240851 1978 ntAPPRIS P3 TSL 1 (best) BASIC31.49■■■□□ 2.63
CDK11AQ9UQ88 CD247-202ENST00000392122 1678 ntAPPRIS ALT1 TSL 1 (best) BASIC31.49■■■□□ 2.63
CDK11AQ9UQ88 NBPF21P-201ENST00000425093 1451 ntBASIC31.49■■■□□ 2.63
CDK11AQ9UQ88 THOC6-209ENST00000575576 1360 ntTSL 5 BASIC31.49■■■□□ 2.63
CDK11AQ9UQ88 AC105935.2-201ENST00000435478 544 ntTSL 4 BASIC31.49■■■□□ 2.63
CDK11AQ9UQ88 MRPL36-202ENST00000505059 610 ntAPPRIS P1 TSL 1 (best) BASIC31.49■■■□□ 2.63
CDK11AQ9UQ88 AC090970.2-201ENST00000561318 865 ntTSL 5 BASIC31.49■■■□□ 2.63
CDK11AQ9UQ88 RPS15-203ENST00000586096 570 ntTSL 2 BASIC31.49■■■□□ 2.63
CDK11AQ9UQ88 MRPL4-204ENST00000588502 827 ntTSL 2 BASIC31.49■■■□□ 2.63
CDK11AQ9UQ88 C21orf2-202ENST00000339818 2233 ntAPPRIS P3 TSL 1 (best) BASIC31.49■■■□□ 2.63
CDK11AQ9UQ88 ECEL1P1-201ENST00000373592 1742 ntBASIC31.49■■■□□ 2.63
CDK11AQ9UQ88 TXNL1-211ENST00000590954 1339 ntAPPRIS P1 TSL 2 BASIC31.49■■■□□ 2.63
CDK11AQ9UQ88 SLC9A3R1-201ENST00000262613 1969 ntAPPRIS P1 TSL 1 (best) BASIC31.48■■■□□ 2.63
CDK11AQ9UQ88 UBE2L6-202ENST00000340573 1573 ntTSL 1 (best) BASIC31.48■■■□□ 2.63
CDK11AQ9UQ88 STAC-204ENST00000457375 1366 ntTSL 2 BASIC31.48■■■□□ 2.63
CDK11AQ9UQ88 KRAS-201ENST00000256078 1119 ntAPPRIS P4 TSL 1 (best) BASIC31.48■■■□□ 2.63
CDK11AQ9UQ88 MRGPRG-201ENST00000332314 870 ntAPPRIS P1 BASIC31.48■■■□□ 2.63
CDK11AQ9UQ88 TREX2-204ENST00000370212 861 ntTSL 5 BASIC31.48■■■□□ 2.63
CDK11AQ9UQ88 TREX2-205ENST00000370231 1255 ntAPPRIS P1 TSL 5 BASIC31.48■■■□□ 2.63
CDK11AQ9UQ88 TREX2-207ENST00000393862 907 ntAPPRIS P1 TSL 2 BASIC31.48■■■□□ 2.63
CDK11AQ9UQ88 ACP1-205ENST00000407983 703 ntTSL 1 (best) BASIC31.48■■■□□ 2.63
CDK11AQ9UQ88 ABCC5-211ENST00000446941 883 ntTSL 1 (best) BASIC31.48■■■□□ 2.63
CDK11AQ9UQ88 AL353708.3-201ENST00000610272 989 ntBASIC31.48■■■□□ 2.63
CDK11AQ9UQ88 TMEM235-205ENST00000586400 2272 ntTSL 1 (best) BASIC31.48■■■□□ 2.63
CDK11AQ9UQ88 NBL1-202ENST00000375136 2172 ntAPPRIS P3 TSL 1 (best) BASIC31.48■■■□□ 2.63
CDK11AQ9UQ88 TMEM25-205ENST00000411589 2442 ntAPPRIS ALT2 TSL 2 BASIC31.48■■■□□ 2.63
CDK11AQ9UQ88 MPV17L2-204ENST00000599612 1408 ntAPPRIS P1 TSL 1 (best) BASIC31.48■■■□□ 2.63
CDK11AQ9UQ88 FBXL14-201ENST00000339235 2111 ntAPPRIS P1 TSL 1 (best) BASIC31.48■■■□□ 2.63
CDK11AQ9UQ88 CUTC-202ENST00000370476 1346 ntAPPRIS P1 TSL 1 (best) BASIC31.48■■■□□ 2.63
CDK11AQ9UQ88 B3GNT6-202ENST00000622824 2503 ntAPPRIS P1 TSL 1 (best) BASIC31.47■■■□□ 2.63
CDK11AQ9UQ88 TRIM15-210ENST00000619857 2217 ntTSL 5 BASIC31.47■■■□□ 2.63
CDK11AQ9UQ88 AL355355.2-201ENST00000442321 338 ntBASIC31.47■■■□□ 2.63
CDK11AQ9UQ88 AF131216.3-201ENST00000525867 1099 ntTSL 2 BASIC31.47■■■□□ 2.63
CDK11AQ9UQ88 AC027682.4-201ENST00000605277 798 ntTSL 5 BASIC31.47■■■□□ 2.63
CDK11AQ9UQ88 CD177P1-201ENST00000606252 935 ntBASIC31.47■■■□□ 2.63
CDK11AQ9UQ88 MIR2861-201ENST00000636310 90 ntBASIC31.47■■■□□ 2.63
CDK11AQ9UQ88 ERLEC1-203ENST00000405123 1756 ntTSL 5 BASIC31.47■■■□□ 2.63
CDK11AQ9UQ88 ARSA-205ENST00000453344 1650 ntTSL 2 BASIC31.47■■■□□ 2.63
CDK11AQ9UQ88 SLC25A10-201ENST00000331531 1946 ntTSL 1 (best) BASIC31.47■■■□□ 2.63
CDK11AQ9UQ88 RNF39-201ENST00000244360 2206 ntAPPRIS P1 TSL 1 (best) BASIC31.47■■■□□ 2.63
CDK11AQ9UQ88 NPEPL1-201ENST00000356091 2378 ntAPPRIS P1 TSL 1 (best) BASIC31.46■■■□□ 2.63
CDK11AQ9UQ88 SNRPA-201ENST00000243563 1621 ntAPPRIS P1 TSL 1 (best) BASIC31.46■■■□□ 2.63
CDK11AQ9UQ88 PANK2-201ENST00000316562 2280 ntAPPRIS P2 TSL 1 (best) BASIC31.46■■■□□ 2.63
CDK11AQ9UQ88 MFSD7-204ENST00000503156 1632 ntAPPRIS ALT2 TSL 5 BASIC31.46■■■□□ 2.63
CDK11AQ9UQ88 CUEDC1-202ENST00000407144 2190 ntAPPRIS P1 TSL 5 BASIC31.46■■■□□ 2.63
CDK11AQ9UQ88 CERS1-202ENST00000542296 1947 ntTSL 1 (best) BASIC31.46■■■□□ 2.63
CDK11AQ9UQ88 LRRC25-202ENST00000595840 1924 ntAPPRIS P1 TSL 1 (best) BASIC31.46■■■□□ 2.63
CDK11AQ9UQ88 PPOX-219ENST00000544598 813 ntTSL 2 BASIC31.46■■■□□ 2.63
CDK11AQ9UQ88 TK2-213ENST00000563369 882 ntTSL 5 BASIC31.46■■■□□ 2.63
CDK11AQ9UQ88 AL121906.2-201ENST00000621597 723 ntBASIC31.46■■■□□ 2.63
CDK11AQ9UQ88 ZNF511-201ENST00000359035 2004 ntTSL 2 BASIC31.46■■■□□ 2.63
CDK11AQ9UQ88 UPF3A-201ENST00000351487 2235 ntTSL 1 (best) BASIC31.45■■■□□ 2.63
CDK11AQ9UQ88 TNFRSF25-203ENST00000351959 1441 ntAPPRIS ALT2 TSL 1 (best) BASIC31.45■■■□□ 2.63
CDK11AQ9UQ88 FAM3A-202ENST00000359889 1712 ntAPPRIS P1 TSL 2 BASIC31.45■■■□□ 2.63
CDK11AQ9UQ88 RCN1P1-201ENST00000400413 996 ntBASIC31.45■■■□□ 2.63
CDK11AQ9UQ88 DTWD1-202ENST00000403028 1584 ntAPPRIS P1 TSL 1 (best) BASIC31.45■■■□□ 2.63
CDK11AQ9UQ88 FOSL1-204ENST00000532401 1132 ntTSL 2 BASIC31.45■■■□□ 2.63
CDK11AQ9UQ88 RPL23AP53-202ENST00000606507 370 ntTSL 3 BASIC31.45■■■□□ 2.63
CDK11AQ9UQ88 CROCCP2-205ENST00000639481 1296 ntTSL 1 (best) BASIC31.45■■■□□ 2.63
CDK11AQ9UQ88 SPEG-203ENST00000396688 1457 ntTSL 3 BASIC31.45■■■□□ 2.62
CDK11AQ9UQ88 ESPN-202ENST00000416731 1338 ntTSL 5 BASIC31.45■■■□□ 2.62
CDK11AQ9UQ88 MEF2B-204ENST00000424583 1405 ntAPPRIS P1 TSL 5 BASIC31.44■■■□□ 2.62
CDK11AQ9UQ88 HAUS4-204ENST00000490506 1447 ntTSL 1 (best) BASIC31.44■■■□□ 2.62
CDK11AQ9UQ88 GAMT-201ENST00000252288 1121 ntAPPRIS P1 TSL 1 (best) BASIC31.44■■■□□ 2.62
CDK11AQ9UQ88 YBEY-205ENST00000397694 534 ntTSL 1 (best) BASIC31.44■■■□□ 2.62
CDK11AQ9UQ88 OAF-202ENST00000531220 815 ntAPPRIS ALT2 TSL 3 BASIC31.44■■■□□ 2.62
CDK11AQ9UQ88 NECAB3-201ENST00000246190 1989 ntTSL 5 BASIC31.44■■■□□ 2.62
CDK11AQ9UQ88 C10orf91-202ENST00000392630 1846 ntTSL 2 BASIC31.44■■■□□ 2.62
CDK11AQ9UQ88 DSG2-201ENST00000261590 5831 ntAPPRIS P1 TSL 1 (best) BASIC31.44■■■□□ 2.62
CDK11AQ9UQ88 GPR162-203ENST00000428545 1610 ntTSL 1 (best) BASIC31.43■■■□□ 2.62
CDK11AQ9UQ88 PKMYT1-216ENST00000574730 1806 ntTSL 2 BASIC31.43■■■□□ 2.62
CDK11AQ9UQ88 TNFRSF12A-206ENST00000575124 1133 ntTSL 2 BASIC31.43■■■□□ 2.62
CDK11AQ9UQ88 SUMO2-203ENST00000578238 490 ntTSL 2 BASIC31.43■■■□□ 2.62
CDK11AQ9UQ88 ATP6V0B-213ENST00000532642 1685 ntTSL 2 BASIC31.43■■■□□ 2.62
CDK11AQ9UQ88 RBM4B-203ENST00000525754 2339 ntAPPRIS P1 TSL 2 BASIC31.43■■■□□ 2.62
CDK11AQ9UQ88 C8orf82-201ENST00000313465 2186 ntAPPRIS ALT2 TSL 1 (best) BASIC31.43■■■□□ 2.62
CDK11AQ9UQ88 RNF39-202ENST00000376751 1970 ntTSL 1 (best) BASIC31.43■■■□□ 2.62
CDK11AQ9UQ88 FDXR-204ENST00000442102 1967 ntTSL 2 BASIC31.43■■■□□ 2.62
CDK11AQ9UQ88 RNH1-202ENST00000356187 1791 ntAPPRIS P1 TSL 1 (best) BASIC31.43■■■□□ 2.62
CDK11AQ9UQ88 AC124283.5-201ENST00000624661 1809 ntBASIC31.42■■■□□ 2.62
CDK11AQ9UQ88 PPP2R2D-201ENST00000455566 5738 ntAPPRIS P1 TSL 1 (best) BASIC31.42■■■□□ 2.62
CDK11AQ9UQ88 EPS8L1-209ENST00000588359 1407 ntTSL 5 BASIC31.42■■■□□ 2.62
Retrieved 100 of 98,524 protein–RNA pairs in 30.2 ms