Protein–RNA interactions for Protein: Q9P244

LRFN1, Leucine-rich repeat and fibronectin type III domain-containing protein 1, humanhuman

Predictions only

Length 771 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRFN1Q9P244 TOM1L2-210ENST00000542206 1320 ntTSL 2 BASIC18.62■□□□□ 0.57
LRFN1Q9P244 PCSK6-217ENST00000618548 4269 ntAPPRIS ALT2 TSL 1 (best) BASIC18.62■□□□□ 0.57
LRFN1Q9P244 TMEM53-205ENST00000372244 1472 ntTSL 2 BASIC18.62■□□□□ 0.57
LRFN1Q9P244 NUP160-203ENST00000526870 1537 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
LRFN1Q9P244 GABRD-213ENST00000640067 1632 ntAPPRIS ALT2 TSL 5 BASIC18.62■□□□□ 0.57
LRFN1Q9P244 PKMYT1-216ENST00000574730 1806 ntTSL 2 BASIC18.62■□□□□ 0.57
LRFN1Q9P244 TTYH1-202ENST00000376530 1885 ntAPPRIS P3 TSL 1 (best) BASIC18.62■□□□□ 0.57
LRFN1Q9P244 STK25-205ENST00000405883 1904 ntTSL 2 BASIC18.62■□□□□ 0.57
LRFN1Q9P244 PABPC1L2A-201ENST00000373519 2237 ntAPPRIS P1 BASIC18.62■□□□□ 0.57
LRFN1Q9P244 UNC93B1-201ENST00000227471 2316 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
LRFN1Q9P244 C19orf12-201ENST00000323670 2464 ntAPPRIS P1 TSL 2 BASIC18.62■□□□□ 0.57
LRFN1Q9P244 ABCG4-204ENST00000615496 2459 ntAPPRIS P1 TSL 2 BASIC18.62■□□□□ 0.57
LRFN1Q9P244 PRKACA-201ENST00000308677 2677 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
LRFN1Q9P244 IKBKG-206ENST00000594239 2299 ntAPPRIS P3 TSL 1 (best) BASIC18.61■□□□□ 0.57
LRFN1Q9P244 RAB11B-201ENST00000328024 1751 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
LRFN1Q9P244 TACO1-201ENST00000258975 1469 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
LRFN1Q9P244 IRF3-221ENST00000598808 1468 ntTSL 5 BASIC18.61■□□□□ 0.57
LRFN1Q9P244 NFS1-214ENST00000541387 1436 ntTSL 2 BASIC18.61■□□□□ 0.57
LRFN1Q9P244 BAALC-201ENST00000297574 801 ntTSL 3 BASIC18.61■□□□□ 0.57
LRFN1Q9P244 LRRC26-201ENST00000371542 1209 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
LRFN1Q9P244 SLC35A2-202ENST00000376512 903 ntTSL 2 BASIC18.61■□□□□ 0.57
LRFN1Q9P244 MTFP1-203ENST00000407550 912 ntTSL 2 BASIC18.61■□□□□ 0.57
LRFN1Q9P244 METTL21A-207ENST00000442521 1003 ntAPPRIS P1 TSL 2 BASIC18.61■□□□□ 0.57
LRFN1Q9P244 FAM131A-208ENST00000453072 1038 ntTSL 2 BASIC18.61■□□□□ 0.57
LRFN1Q9P244 MIR381HG-201ENST00000553692 425 ntTSL 3 BASIC18.61■□□□□ 0.57
LRFN1Q9P244 CD24-208ENST00000622315 825 ntAPPRIS ALT2 TSL 2 BASIC18.61■□□□□ 0.57
LRFN1Q9P244 YAP1-201ENST00000282441 5386 ntAPPRIS P3 TSL 1 (best) BASIC18.61■□□□□ 0.57
LRFN1Q9P244 LTK-202ENST00000355166 2940 ntAPPRIS ALT2 TSL 1 (best) BASIC18.61■□□□□ 0.57
LRFN1Q9P244 KLHDC2-201ENST00000298307 5514 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
LRFN1Q9P244 HIC1-207ENST00000619757 6711 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
LRFN1Q9P244 C7orf26-201ENST00000344417 2182 ntAPPRIS P1 TSL 2 BASIC18.61■□□□□ 0.57
LRFN1Q9P244 FEM1AP4-201ENST00000443167 1987 ntBASIC18.61■□□□□ 0.57
LRFN1Q9P244 LRRC25-202ENST00000595840 1924 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
LRFN1Q9P244 NES-201ENST00000368223 5558 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
LRFN1Q9P244 RNH1-206ENST00000438658 1725 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
LRFN1Q9P244 HSD17B1-202ENST00000585807 4982 ntAPPRIS P3 TSL 1 (best) BASIC18.6■□□□□ 0.57
LRFN1Q9P244 SETD6-201ENST00000219315 1553 ntAPPRIS ALT2 TSL 1 (best) BASIC18.6■□□□□ 0.57
LRFN1Q9P244 RNASET2-214ENST00000620173 1391 ntTSL 5 BASIC18.6■□□□□ 0.57
LRFN1Q9P244 IRX4-201ENST00000231357 2221 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
LRFN1Q9P244 DHRS4-204ENST00000543741 1340 ntTSL 2 BASIC18.6■□□□□ 0.57
LRFN1Q9P244 GCHFR-201ENST00000260447 777 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
LRFN1Q9P244 ANKRD10-202ENST00000310847 1193 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
LRFN1Q9P244 LSR-202ENST00000354900 2105 ntAPPRIS ALT2 TSL 1 (best) BASIC18.6■□□□□ 0.57
LRFN1Q9P244 AL390719.1-204ENST00000412397 1219 ntBASIC18.6■□□□□ 0.57
LRFN1Q9P244 POM121L13P-201ENST00000422362 380 ntBASIC18.6■□□□□ 0.57
LRFN1Q9P244 AC073111.3-201ENST00000478789 635 ntAPPRIS P1 TSL 3 BASIC18.6■□□□□ 0.57
LRFN1Q9P244 COX4I1-202ENST00000561569 716 ntAPPRIS P1 TSL 2 BASIC18.6■□□□□ 0.57
LRFN1Q9P244 CLN6-206ENST00000565471 1075 ntTSL 2 BASIC18.6■□□□□ 0.57
LRFN1Q9P244 MIR2861-201ENST00000636310 90 ntBASIC18.6■□□□□ 0.57
LRFN1Q9P244 RAP1B-204ENST00000393436 2049 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
LRFN1Q9P244 USP25-202ENST00000285681 5216 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
LRFN1Q9P244 EPHX3-201ENST00000221730 1822 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
LRFN1Q9P244 JUNB-201ENST00000302754 1820 ntAPPRIS P1 BASIC18.6■□□□□ 0.57
LRFN1Q9P244 SLC18A3-201ENST00000374115 2420 ntAPPRIS P1 BASIC18.6■□□□□ 0.57
LRFN1Q9P244 SUMF2-204ENST00000395436 1683 ntAPPRIS ALT2 TSL 1 (best) BASIC18.6■□□□□ 0.57
LRFN1Q9P244 MAPK9-203ENST00000393360 4326 ntTSL 5 BASIC18.6■□□□□ 0.57
LRFN1Q9P244 ZNF584-201ENST00000306910 2332 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
LRFN1Q9P244 RITA1-201ENST00000548278 2053 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
LRFN1Q9P244 AC010173.1-201ENST00000549023 1453 ntTSL 2 BASIC18.59■□□□□ 0.57
LRFN1Q9P244 WDR37-203ENST00000381329 1307 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
LRFN1Q9P244 CAVIN3-201ENST00000303927 1174 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
LRFN1Q9P244 C11orf86-201ENST00000308963 1187 ntAPPRIS P1 TSL 2 BASIC18.59■□□□□ 0.57
LRFN1Q9P244 LRR1-202ENST00000318317 957 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
LRFN1Q9P244 MTHFD1L-201ENST00000367307 1049 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
LRFN1Q9P244 RNF5-203ENST00000375094 1168 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
LRFN1Q9P244 PYCR3-202ENST00000377579 985 ntTSL 2 BASIC18.59■□□□□ 0.57
LRFN1Q9P244 FLYWCH2-202ENST00000396958 1036 ntAPPRIS P2 TSL 1 (best) BASIC18.59■□□□□ 0.57
LRFN1Q9P244 AC007040.1-201ENST00000416229 477 ntTSL 3 BASIC18.59■□□□□ 0.57
LRFN1Q9P244 LINC01301-204ENST00000530725 577 ntTSL 4 BASIC18.59■□□□□ 0.57
LRFN1Q9P244 AC005829.2-201ENST00000571422 1056 ntBASIC18.59■□□□□ 0.57
LRFN1Q9P244 CACNB3-205ENST00000547392 2237 ntTSL 5 BASIC18.59■□□□□ 0.57
LRFN1Q9P244 BICRA-204ENST00000614245 5697 ntAPPRIS ALT2 TSL 5 BASIC18.59■□□□□ 0.57
LRFN1Q9P244 ZNF664-207ENST00000539644 5108 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
LRFN1Q9P244 NSUN5-204ENST00000438747 1663 ntAPPRIS P4 TSL 1 (best) BASIC18.59■□□□□ 0.57
LRFN1Q9P244 TRABD-204ENST00000395829 1628 ntAPPRIS ALT2 TSL 5 BASIC18.59■□□□□ 0.57
LRFN1Q9P244 DPYSL5-202ENST00000401478 1972 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
LRFN1Q9P244 MOK-233ENST00000524214 1539 ntTSL 2 BASIC18.59■□□□□ 0.57
LRFN1Q9P244 GPAA1-202ENST00000361036 1840 ntTSL 1 (best) BASIC18.58■□□□□ 0.57
LRFN1Q9P244 ARHGEF25-201ENST00000286494 2552 ntTSL 1 (best) BASIC18.58■□□□□ 0.57
LRFN1Q9P244 WRNIP1-203ENST00000380771 2595 ntTSL 1 (best) BASIC18.58■□□□□ 0.57
LRFN1Q9P244 ZDHHC16-202ENST00000352634 1718 ntAPPRIS ALT1 TSL 1 (best) BASIC18.58■□□□□ 0.57
LRFN1Q9P244 OTUB1-209ENST00000538426 1729 ntAPPRIS P2 TSL 1 (best) BASIC18.58■□□□□ 0.57
LRFN1Q9P244 SLC35D3-201ENST00000331858 2359 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
LRFN1Q9P244 BOLA1-203ENST00000369153 1096 ntAPPRIS P1 TSL 3 BASIC18.58■□□□□ 0.56
LRFN1Q9P244 NDUFA8-201ENST00000373768 844 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
LRFN1Q9P244 UPK3B-203ENST00000394849 1041 ntAPPRIS ALT2 TSL 2 BASIC18.58■□□□□ 0.56
LRFN1Q9P244 CHCHD10-201ENST00000401675 691 ntAPPRIS P1 TSL 5 BASIC18.58■□□□□ 0.56
LRFN1Q9P244 YWHAZ-209ENST00000419477 891 ntAPPRIS P1 TSL 3 BASIC18.58■□□□□ 0.56
LRFN1Q9P244 ZNF529-AS1-202ENST00000475219 1033 ntTSL 1 (best) BASIC18.58■□□□□ 0.56
LRFN1Q9P244 FAM163B-202ENST00000496132 811 ntAPPRIS P1 TSL 3 BASIC18.58■□□□□ 0.56
LRFN1Q9P244 C1QBPP2-201ENST00000528754 825 ntBASIC18.58■□□□□ 0.56
LRFN1Q9P244 JPT2-204ENST00000561516 1065 ntTSL 1 (best) BASIC18.58■□□□□ 0.56
LRFN1Q9P244 AC069544.1-201ENST00000609399 999 ntBASIC18.58■□□□□ 0.56
LRFN1Q9P244 FAM197Y4-202ENST00000622692 608 ntBASIC18.58■□□□□ 0.56
LRFN1Q9P244 AC006557.6-201ENST00000623071 864 ntBASIC18.58■□□□□ 0.56
LRFN1Q9P244 GPR162-203ENST00000428545 1610 ntTSL 1 (best) BASIC18.58■□□□□ 0.56
LRFN1Q9P244 HOXB2-201ENST00000330070 1562 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
LRFN1Q9P244 P4HA3-202ENST00000427714 2248 ntTSL 2 BASIC18.58■□□□□ 0.56
LRFN1Q9P244 SMIM10L2A-201ENST00000417443 5230 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
LRFN1Q9P244 RASGRP2-210ENST00000394430 2174 ntTSL 2 BASIC18.58■□□□□ 0.56
Retrieved 100 of 98,524 protein–RNA pairs in 35.4 ms