Protein–RNA interactions for Protein: Q9NWD8

TMEM248, Transmembrane protein 248, humanhuman

Predictions only

Length 314 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM248Q9NWD8 TATDN2-201ENST00000287652 5342 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
TMEM248Q9NWD8 MFF-205ENST00000354503 1085 ntTSL 2 BASIC20.73■□□□□ 0.91
TMEM248Q9NWD8 C2orf82-203ENST00000409533 561 ntAPPRIS P2 TSL 4 BASIC20.73■□□□□ 0.91
TMEM248Q9NWD8 ZNF295-AS1-201ENST00000412906 952 ntTSL 1 (best) BASIC20.73■□□□□ 0.91
TMEM248Q9NWD8 ELAVL3-202ENST00000438662 1223 ntAPPRIS ALT1 TSL 5 BASIC20.73■□□□□ 0.91
TMEM248Q9NWD8 GATS-209ENST00000454084 1030 ntTSL 3 BASIC20.73■□□□□ 0.91
TMEM248Q9NWD8 C17orf107-202ENST00000521575 1275 ntAPPRIS ALT2 TSL 1 (best) BASIC20.73■□□□□ 0.91
TMEM248Q9NWD8 PDXDC2P-202ENST00000527016 543 ntTSL 3 BASIC20.73■□□□□ 0.91
TMEM248Q9NWD8 AL356020.1-201ENST00000554235 1076 ntTSL 5 BASIC20.73■□□□□ 0.91
TMEM248Q9NWD8 LIMD2-206ENST00000578993 602 ntTSL 3 BASIC20.73■□□□□ 0.91
TMEM248Q9NWD8 TXNL4A-203ENST00000585474 1185 ntTSL 1 (best) BASIC20.73■□□□□ 0.91
TMEM248Q9NWD8 BAZ1A-201ENST00000358716 5920 ntTSL 1 (best) BASIC20.73■□□□□ 0.91
TMEM248Q9NWD8 FAM102B-201ENST00000370035 5600 ntAPPRIS P2 TSL 1 (best) BASIC20.73■□□□□ 0.91
TMEM248Q9NWD8 SLAIN1-206ENST00000418532 2855 ntAPPRIS ALT2 TSL 5 BASIC20.73■□□□□ 0.91
TMEM248Q9NWD8 IRX4-206ENST00000513692 2391 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
TMEM248Q9NWD8 SUN1-220ENST00000457378 1309 ntTSL 1 (best) BASIC20.73■□□□□ 0.91
TMEM248Q9NWD8 ZNF331-202ENST00000411977 2248 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
TMEM248Q9NWD8 ARHGDIA-201ENST00000269321 1906 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
TMEM248Q9NWD8 KCNS3-201ENST00000304101 2333 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
TMEM248Q9NWD8 PKD1P6-201ENST00000343738 4769 ntBASIC20.72■□□□□ 0.91
TMEM248Q9NWD8 CYP1B1-207ENST00000614273 2174 ntAPPRIS P1 TSL 5 BASIC20.72■□□□□ 0.91
TMEM248Q9NWD8 DUSP5-201ENST00000369583 2557 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
TMEM248Q9NWD8 SNRPA-201ENST00000243563 1621 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
TMEM248Q9NWD8 DRD2-202ENST00000362072 2789 ntAPPRIS P2 TSL 1 (best) BASIC20.72■□□□□ 0.91
TMEM248Q9NWD8 TTLL7-214ENST00000610996 2028 ntTSL 5 BASIC20.72■□□□□ 0.91
TMEM248Q9NWD8 CDC42EP5-201ENST00000301200 864 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
TMEM248Q9NWD8 MZB1-201ENST00000302125 825 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
TMEM248Q9NWD8 LIPT2-201ENST00000310109 1018 ntAPPRIS P1 TSL 2 BASIC20.72■□□□□ 0.91
TMEM248Q9NWD8 SPATA25-201ENST00000372519 757 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
TMEM248Q9NWD8 DENND3-207ENST00000518347 850 ntTSL 2 BASIC20.72■□□□□ 0.91
TMEM248Q9NWD8 UNC93B6-201ENST00000525262 1143 ntTSL 5 BASIC20.72■□□□□ 0.91
TMEM248Q9NWD8 ASGR1-204ENST00000572879 797 ntTSL 5 BASIC20.72■□□□□ 0.91
TMEM248Q9NWD8 DPP3P2-201ENST00000416030 1696 ntBASIC20.72■□□□□ 0.91
TMEM248Q9NWD8 SLC16A3-201ENST00000392339 2074 ntAPPRIS P1 TSL 5 BASIC20.72■□□□□ 0.91
TMEM248Q9NWD8 SLC16A3-202ENST00000392341 2086 ntAPPRIS P1 TSL 5 BASIC20.72■□□□□ 0.91
TMEM248Q9NWD8 SPATA22-210ENST00000573128 1704 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
TMEM248Q9NWD8 NEURL4-202ENST00000399464 5200 ntAPPRIS P4 TSL 1 (best) BASIC20.72■□□□□ 0.91
TMEM248Q9NWD8 ZNF707-201ENST00000358656 2183 ntAPPRIS P1 TSL 2 BASIC20.72■□□□□ 0.91
TMEM248Q9NWD8 CHRNA3-202ENST00000348639 2030 ntTSL 1 (best) BASIC20.71■□□□□ 0.91
TMEM248Q9NWD8 PHACTR2-203ENST00000367584 2490 ntAPPRIS ALT2 TSL 5 BASIC20.71■□□□□ 0.91
TMEM248Q9NWD8 ECE2-203ENST00000359140 3147 ntTSL 1 (best) BASIC20.71■□□□□ 0.91
TMEM248Q9NWD8 PTBP1P-201ENST00000554374 1601 ntBASIC20.71■□□□□ 0.91
TMEM248Q9NWD8 TSSC4-207ENST00000451491 1423 ntAPPRIS P3 TSL 1 (best) BASIC20.71■□□□□ 0.91
TMEM248Q9NWD8 SPON2-201ENST00000290902 1869 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
TMEM248Q9NWD8 MAP7-206ENST00000611373 2317 ntAPPRIS ALT2 TSL 5 BASIC20.71■□□□□ 0.91
TMEM248Q9NWD8 ZDHHC5-204ENST00000527985 2817 ntTSL 1 (best) BASIC20.71■□□□□ 0.91
TMEM248Q9NWD8 ISYNA1-201ENST00000338128 2420 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
TMEM248Q9NWD8 CFC1-201ENST00000259216 1046 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
TMEM248Q9NWD8 CFC1B-201ENST00000281882 1071 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
TMEM248Q9NWD8 HCFC1R1-202ENST00000354679 765 ntTSL 2 BASIC20.71■□□□□ 0.91
TMEM248Q9NWD8 FAM160B1-201ENST00000369246 666 ntTSL 2 BASIC20.71■□□□□ 0.91
TMEM248Q9NWD8 SERP1-205ENST00000487153 657 ntTSL 4 BASIC20.71■□□□□ 0.91
TMEM248Q9NWD8 FAM219B-212ENST00000565772 1249 ntTSL 1 (best) BASIC20.71■□□□□ 0.91
TMEM248Q9NWD8 HLA-B-256ENST00000639848 1089 ntBASIC20.71■□□□□ 0.91
TMEM248Q9NWD8 AC068987.5-201ENST00000642069 987 ntAPPRIS P1 BASIC20.71■□□□□ 0.91
TMEM248Q9NWD8 RIPPLY3-201ENST00000329553 2235 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
TMEM248Q9NWD8 IRX2-201ENST00000302057 2456 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
TMEM248Q9NWD8 AVPR2-202ENST00000358927 1763 ntAPPRIS P1 TSL 5 BASIC20.71■□□□□ 0.91
TMEM248Q9NWD8 H19-201ENST00000411754 1788 ntTSL 5 BASIC20.71■□□□□ 0.91
TMEM248Q9NWD8 GPSM1-206ENST00000616132 2270 ntTSL 1 (best) BASIC20.71■□□□□ 0.91
TMEM248Q9NWD8 XBP1-203ENST00000403532 1824 ntAPPRIS ALT1 TSL 3 BASIC20.71■□□□□ 0.91
TMEM248Q9NWD8 KEAP1-202ENST00000393623 2648 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
TMEM248Q9NWD8 PCSK6-220ENST00000622483 3132 ntAPPRIS ALT2 TSL 1 (best) BASIC20.71■□□□□ 0.91
TMEM248Q9NWD8 PPP1R13B-201ENST00000202556 4958 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
TMEM248Q9NWD8 SNUPN-205ENST00000564644 1931 ntAPPRIS P1 TSL 2 BASIC20.7■□□□□ 0.91
TMEM248Q9NWD8 ADRA1A-203ENST00000380572 1697 ntTSL 1 (best) BASIC20.7■□□□□ 0.91
TMEM248Q9NWD8 FAM20C-201ENST00000313766 2751 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
TMEM248Q9NWD8 RAB11B-201ENST00000328024 1751 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
TMEM248Q9NWD8 PHF20L1-214ENST00000485595 1810 ntTSL 2 BASIC20.7■□□□□ 0.9
TMEM248Q9NWD8 FBLN5-202ENST00000342058 2123 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
TMEM248Q9NWD8 CKLF-CMTM1-204ENST00000532838 587 ntAPPRIS ALT2 TSL 4 BASIC20.7■□□□□ 0.9
TMEM248Q9NWD8 KRT18P6-201ENST00000555540 1265 ntBASIC20.7■□□□□ 0.9
TMEM248Q9NWD8 AF274858.3-202ENST00000569906 755 ntTSL 3 BASIC20.7■□□□□ 0.9
TMEM248Q9NWD8 MMP25-AS1-204ENST00000572574 794 ntTSL 5 BASIC20.7■□□□□ 0.9
TMEM248Q9NWD8 TRAPPC5-203ENST00000595985 411 ntTSL 3 BASIC20.7■□□□□ 0.9
TMEM248Q9NWD8 ACHE-207ENST00000428317 2159 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
TMEM248Q9NWD8 RENBP-201ENST00000369997 1322 ntTSL 5 BASIC20.7■□□□□ 0.9
TMEM248Q9NWD8 WDR37-203ENST00000381329 1307 ntTSL 1 (best) BASIC20.7■□□□□ 0.9
TMEM248Q9NWD8 ME3-202ENST00000393324 2240 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
TMEM248Q9NWD8 AGMAT-201ENST00000375826 2500 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
TMEM248Q9NWD8 DET1-207ENST00000564406 2315 ntTSL 2 BASIC20.7■□□□□ 0.9
TMEM248Q9NWD8 C17orf67-201ENST00000397861 2013 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
TMEM248Q9NWD8 FAM66E-201ENST00000529252 1433 ntTSL 2 BASIC20.7■□□□□ 0.9
TMEM248Q9NWD8 TCP11-202ENST00000311875 2166 ntAPPRIS ALT2 TSL 1 (best) BASIC20.69■□□□□ 0.9
TMEM248Q9NWD8 PTPRM-211ENST00000580170 5941 ntAPPRIS ALT2 TSL 1 (best) BASIC20.69■□□□□ 0.9
TMEM248Q9NWD8 NDRG2-242ENST00000555158 2216 ntAPPRIS ALT1 TSL 1 (best) BASIC20.69■□□□□ 0.9
TMEM248Q9NWD8 FBL-201ENST00000221801 1160 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
TMEM248Q9NWD8 SDHC-201ENST00000342751 1127 ntTSL 1 (best) BASIC20.69■□□□□ 0.9
TMEM248Q9NWD8 N4BP2L1-203ENST00000380133 903 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
TMEM248Q9NWD8 ANKRD39-201ENST00000393537 976 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
TMEM248Q9NWD8 OTUB1-203ENST00000428192 1296 ntAPPRIS P2 TSL 2 BASIC20.69■□□□□ 0.9
TMEM248Q9NWD8 AP000282.1-201ENST00000454622 682 ntTSL 2 BASIC20.69■□□□□ 0.9
TMEM248Q9NWD8 AC023632.3-201ENST00000521633 145 ntBASIC20.69■□□□□ 0.9
TMEM248Q9NWD8 PLEKHB1-216ENST00000543085 632 ntTSL 3 BASIC20.69■□□□□ 0.9
TMEM248Q9NWD8 ASPSCR1-211ENST00000581647 720 ntTSL 2 BASIC20.69■□□□□ 0.9
TMEM248Q9NWD8 AC060766.5-201ENST00000590539 871 ntBASIC20.69■□□□□ 0.9
TMEM248Q9NWD8 SLC35A3-218ENST00000639994 1114 ntTSL 5 BASIC20.69■□□□□ 0.9
TMEM248Q9NWD8 QTRT1-201ENST00000250237 1317 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
TMEM248Q9NWD8 KATNAL2-208ENST00000592005 1348 ntTSL 1 (best) BASIC20.69■□□□□ 0.9
TMEM248Q9NWD8 PABPC4-204ENST00000372862 2470 ntTSL 5 BASIC20.69■□□□□ 0.9
Retrieved 100 of 98,524 protein–RNA pairs in 22.7 ms