Protein–RNA interactions for Protein: Q9NSE2

CISH, Cytokine-inducible SH2-containing protein, humanhuman

Predictions only

Length 258 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CISHQ9NSE2 TNNI3-207ENST00000588882 669 ntTSL 2 BASIC21.65■■□□□ 1.06
CISHQ9NSE2 AC018730.2-201ENST00000598623 443 ntTSL 5 BASIC21.65■■□□□ 1.06
CISHQ9NSE2 BHLHA15-202ENST00000609256 796 ntAPPRIS P1 TSL 3 BASIC21.65■■□□□ 1.06
CISHQ9NSE2 RIPPLY3-201ENST00000329553 2235 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
CISHQ9NSE2 PHOSPHO1-202ENST00000413580 2173 ntTSL 2 BASIC21.65■■□□□ 1.06
CISHQ9NSE2 MTMR9LP-204ENST00000441044 2624 ntTSL 1 (best) BASIC21.65■■□□□ 1.06
CISHQ9NSE2 C19orf35-201ENST00000342063 2574 ntAPPRIS P1 TSL 2 BASIC21.65■■□□□ 1.06
CISHQ9NSE2 EGFR-204ENST00000420316 1570 ntTSL 1 (best) BASIC21.65■■□□□ 1.06
CISHQ9NSE2 TMEM250-205ENST00000561457 2804 ntAPPRIS P1 TSL 2 BASIC21.65■■□□□ 1.06
CISHQ9NSE2 MTAP-204ENST00000460874 1434 ntTSL 2 BASIC21.64■■□□□ 1.06
CISHQ9NSE2 VRK2-207ENST00000440705 1676 ntAPPRIS ALT2 TSL 1 (best) BASIC21.64■■□□□ 1.05
CISHQ9NSE2 FOXI1-202ENST00000449804 2011 ntTSL 1 (best) BASIC21.64■■□□□ 1.05
CISHQ9NSE2 DNAJA4-210ENST00000489435 947 ntTSL 3 BASIC21.64■■□□□ 1.05
CISHQ9NSE2 PLEKHJ1-205ENST00000587394 937 ntTSL 2 BASIC21.64■■□□□ 1.05
CISHQ9NSE2 ACHE-207ENST00000428317 2159 ntAPPRIS P1 TSL 1 (best) BASIC21.64■■□□□ 1.05
CISHQ9NSE2 KCNIP2-207ENST00000358038 2489 ntAPPRIS ALT1 TSL 1 (best) BASIC21.64■■□□□ 1.05
CISHQ9NSE2 CIZ1-204ENST00000372938 2984 ntAPPRIS P3 TSL 1 (best) BASIC21.63■■□□□ 1.05
CISHQ9NSE2 DNAJC7-203ENST00000457167 2022 ntAPPRIS P1 TSL 1 (best) BASIC21.63■■□□□ 1.05
CISHQ9NSE2 CLDN5-204ENST00000618236 1374 ntAPPRIS P1 BASIC21.63■■□□□ 1.05
CISHQ9NSE2 TACC3-213ENST00000617535 1693 ntTSL 5 BASIC21.63■■□□□ 1.05
CISHQ9NSE2 GLIPR2-203ENST00000396613 1917 ntTSL 4 BASIC21.63■■□□□ 1.05
CISHQ9NSE2 MFSD10-206ENST00000508221 1639 ntTSL 5 BASIC21.63■■□□□ 1.05
CISHQ9NSE2 ITPKC-201ENST00000263370 3385 ntAPPRIS P1 TSL 1 (best) BASIC21.63■■□□□ 1.05
CISHQ9NSE2 MED10-201ENST00000255764 1141 ntAPPRIS P1 TSL 1 (best) BASIC21.63■■□□□ 1.05
CISHQ9NSE2 NAA20-202ENST00000334982 1260 ntAPPRIS P1 TSL 1 (best) BASIC21.63■■□□□ 1.05
CISHQ9NSE2 C20orf196-202ENST00000378979 585 ntTSL 2 BASIC21.63■■□□□ 1.05
CISHQ9NSE2 OR2A1-AS1-201ENST00000462305 773 ntBASIC21.63■■□□□ 1.05
CISHQ9NSE2 AC004889.1-204ENST00000474656 773 ntTSL 3 BASIC21.63■■□□□ 1.05
CISHQ9NSE2 MYL5-206ENST00000506838 2956 ntTSL 2 BASIC21.63■■□□□ 1.05
CISHQ9NSE2 AC098934.4-201ENST00000564127 592 ntBASIC21.63■■□□□ 1.05
CISHQ9NSE2 MIR4758-201ENST00000577688 71 ntBASIC21.63■■□□□ 1.05
CISHQ9NSE2 PTCD3-220ENST00000627371 210 ntTSL 5 BASIC21.63■■□□□ 1.05
CISHQ9NSE2 MORN1-202ENST00000378529 1500 ntAPPRIS ALT2 TSL 1 (best) BASIC21.63■■□□□ 1.05
CISHQ9NSE2 KCNMA1-209ENST00000372443 5059 ntAPPRIS ALT2 TSL 5 BASIC21.63■■□□□ 1.05
CISHQ9NSE2 AVPR2-202ENST00000358927 1763 ntAPPRIS P1 TSL 5 BASIC21.63■■□□□ 1.05
CISHQ9NSE2 ANKLE1-204ENST00000594072 2294 ntTSL 5 BASIC21.63■■□□□ 1.05
CISHQ9NSE2 SLC22A17-202ENST00000354772 2238 ntAPPRIS ALT2 TSL 1 (best) BASIC21.63■■□□□ 1.05
CISHQ9NSE2 RPS6KL1-216ENST00000557413 2425 ntAPPRIS P1 TSL 5 BASIC21.63■■□□□ 1.05
CISHQ9NSE2 COCH-201ENST00000216361 2397 ntAPPRIS P1 TSL 1 (best) BASIC21.62■■□□□ 1.05
CISHQ9NSE2 DTD1-201ENST00000377452 1387 ntAPPRIS P1 TSL 1 (best) BASIC21.62■■□□□ 1.05
CISHQ9NSE2 MGAT5B-209ENST00000569840 4492 ntAPPRIS ALT1 TSL 5 BASIC21.62■■□□□ 1.05
CISHQ9NSE2 NXN-202ENST00000537628 1340 ntTSL 3 BASIC21.62■■□□□ 1.05
CISHQ9NSE2 TSPAN3-207ENST00000559494 1326 ntTSL 5 BASIC21.62■■□□□ 1.05
CISHQ9NSE2 TPCN2-205ENST00000542467 2000 ntTSL 2 BASIC21.62■■□□□ 1.05
CISHQ9NSE2 MAP2K5-203ENST00000354498 1783 ntTSL 2 BASIC21.62■■□□□ 1.05
CISHQ9NSE2 TMEM44-204ENST00000392432 2490 ntTSL 1 (best) BASIC21.62■■□□□ 1.05
CISHQ9NSE2 NDRG2-242ENST00000555158 2216 ntAPPRIS ALT1 TSL 1 (best) BASIC21.62■■□□□ 1.05
CISHQ9NSE2 C16orf74-201ENST00000284245 906 ntAPPRIS P2 TSL 1 (best) BASIC21.62■■□□□ 1.05
CISHQ9NSE2 EMC6-202ENST00000397133 762 ntAPPRIS P1 TSL 2 BASIC21.62■■□□□ 1.05
CISHQ9NSE2 LINC01191-201ENST00000412690 844 ntTSL 2 BASIC21.62■■□□□ 1.05
CISHQ9NSE2 SERPINH1P1-201ENST00000419794 1249 ntBASIC21.62■■□□□ 1.05
CISHQ9NSE2 PPP1R14BP2-201ENST00000426284 444 ntBASIC21.62■■□□□ 1.05
CISHQ9NSE2 DUSP5P2-201ENST00000426873 1033 ntBASIC21.62■■□□□ 1.05
CISHQ9NSE2 HES2-205ENST00000487437 968 ntTSL 3 BASIC21.62■■□□□ 1.05
CISHQ9NSE2 C2orf69P4-201ENST00000565394 541 ntBASIC21.62■■□□□ 1.05
CISHQ9NSE2 AC142086.2-201ENST00000569753 217 ntBASIC21.62■■□□□ 1.05
CISHQ9NSE2 OGFR-204ENST00000621591 1194 ntTSL 5 BASIC21.62■■□□□ 1.05
CISHQ9NSE2 PAQR4-201ENST00000293978 2644 ntTSL 2 BASIC21.62■■□□□ 1.05
CISHQ9NSE2 CACNB2-203ENST00000352115 1911 ntTSL 1 (best) BASIC21.62■■□□□ 1.05
CISHQ9NSE2 LINC01521-201ENST00000504184 1943 ntBASIC21.62■■□□□ 1.05
CISHQ9NSE2 GABRA2-214ENST00000515082 2366 ntTSL 1 (best) BASIC21.62■■□□□ 1.05
CISHQ9NSE2 ATF5-202ENST00000595125 1637 ntAPPRIS P1 TSL 2 BASIC21.62■■□□□ 1.05
CISHQ9NSE2 AOC1-202ENST00000416793 2453 ntTSL 1 (best) BASIC21.62■■□□□ 1.05
CISHQ9NSE2 ACBD4-201ENST00000321854 1806 ntAPPRIS P1 TSL 1 (best) BASIC21.62■■□□□ 1.05
CISHQ9NSE2 XBP1-203ENST00000403532 1824 ntAPPRIS ALT1 TSL 3 BASIC21.62■■□□□ 1.05
CISHQ9NSE2 FAM129C-203ENST00000449408 2004 ntAPPRIS ALT2 TSL 2 BASIC21.62■■□□□ 1.05
CISHQ9NSE2 GNS-207ENST00000542058 2020 ntAPPRIS ALT2 TSL 2 BASIC21.62■■□□□ 1.05
CISHQ9NSE2 AMER2-202ENST00000515384 3197 ntAPPRIS P1 BASIC21.61■■□□□ 1.05
CISHQ9NSE2 AC091230.1-202ENST00000564823 5356 ntTSL 2 BASIC21.61■■□□□ 1.05
CISHQ9NSE2 DPP3P2-201ENST00000416030 1696 ntBASIC21.61■■□□□ 1.05
CISHQ9NSE2 KRTAP5-8-201ENST00000398534 1183 ntAPPRIS P1 BASIC21.61■■□□□ 1.05
CISHQ9NSE2 YIF1B-213ENST00000591755 1077 ntTSL 2 BASIC21.61■■□□□ 1.05
CISHQ9NSE2 ATRAID-208ENST00000611786 1256 ntTSL 1 (best) BASIC21.61■■□□□ 1.05
CISHQ9NSE2 TMEM191B-201ENST00000612978 1220 ntAPPRIS P2 TSL 5 BASIC21.61■■□□□ 1.05
CISHQ9NSE2 AL158151.1-201ENST00000372490 2047 ntTSL 2 BASIC21.61■■□□□ 1.05
CISHQ9NSE2 AL512408.1-201ENST00000569378 2000 ntBASIC21.61■■□□□ 1.05
CISHQ9NSE2 PCMT1-205ENST00000464889 1984 ntAPPRIS P3 TSL 1 (best) BASIC21.61■■□□□ 1.05
CISHQ9NSE2 SPATA22-210ENST00000573128 1704 ntAPPRIS P1 TSL 1 (best) BASIC21.6■■□□□ 1.05
CISHQ9NSE2 SMG8-203ENST00000578922 2178 ntBASIC21.6■■□□□ 1.05
CISHQ9NSE2 KREMEN2-201ENST00000303746 2326 ntAPPRIS P4 TSL 1 (best) BASIC21.6■■□□□ 1.05
CISHQ9NSE2 TDRD10-202ENST00000368482 2331 ntAPPRIS P3 TSL 1 (best) BASIC21.6■■□□□ 1.05
CISHQ9NSE2 TMEM243-201ENST00000257637 1063 ntAPPRIS P1 TSL 1 (best) BASIC21.6■■□□□ 1.05
CISHQ9NSE2 SBK2-201ENST00000344158 1056 ntAPPRIS P1 TSL 2 BASIC21.6■■□□□ 1.05
CISHQ9NSE2 AL355802.2-201ENST00000402069 882 ntBASIC21.6■■□□□ 1.05
CISHQ9NSE2 SBK2-202ENST00000413299 1085 ntAPPRIS P1 TSL 5 BASIC21.6■■□□□ 1.05
CISHQ9NSE2 LINC01956-201ENST00000557729 695 ntTSL 5 BASIC21.6■■□□□ 1.05
CISHQ9NSE2 NDOR1-201ENST00000344894 1794 ntAPPRIS P1 TSL 1 (best) BASIC21.6■■□□□ 1.05
CISHQ9NSE2 TANGO2-217ENST00000456048 2439 ntTSL 2 BASIC21.6■■□□□ 1.05
CISHQ9NSE2 GPAA1-201ENST00000355091 2078 ntAPPRIS P1 TSL 1 (best) BASIC21.6■■□□□ 1.05
CISHQ9NSE2 IKZF1-209ENST00000438033 1748 ntTSL 2 BASIC21.6■■□□□ 1.05
CISHQ9NSE2 ADGRA3-204ENST00000502482 2870 ntTSL 1 (best) BASIC21.6■■□□□ 1.05
CISHQ9NSE2 AC005224.2-201ENST00000571192 1885 ntTSL 2 BASIC21.6■■□□□ 1.05
CISHQ9NSE2 FAM3C-201ENST00000359943 2508 ntAPPRIS P1 TSL 1 (best) BASIC21.6■■□□□ 1.05
CISHQ9NSE2 ANKRD13D-202ENST00000447274 2881 ntTSL 1 (best) BASIC21.59■■□□□ 1.05
CISHQ9NSE2 FUZ-212ENST00000528094 1479 ntTSL 2 BASIC21.59■■□□□ 1.05
CISHQ9NSE2 ODC1-202ENST00000405333 1943 ntAPPRIS P1 TSL 2 BASIC21.59■■□□□ 1.05
CISHQ9NSE2 NUDT22-201ENST00000279206 1094 ntAPPRIS P3 TSL 1 (best) BASIC21.59■■□□□ 1.05
CISHQ9NSE2 FN3K-201ENST00000300784 1434 ntAPPRIS P1 TSL 1 (best) BASIC21.59■■□□□ 1.05
CISHQ9NSE2 NF2-201ENST00000334961 2020 ntTSL 1 (best) BASIC21.59■■□□□ 1.05
CISHQ9NSE2 TNFRSF14-201ENST00000355716 1707 ntAPPRIS P2 TSL 1 (best) BASIC21.59■■□□□ 1.05
Retrieved 100 of 98,524 protein–RNA pairs in 39.9 ms