Protein–RNA interactions for Protein: Q9NQG7

HPS4, Hermansky-Pudlak syndrome 4 protein, humanhuman

Predictions only

Length 708 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HPS4Q9NQG7 AC009090.2-201ENST00000565829 472 ntTSL 3 BASIC20.99■□□□□ 0.95
HPS4Q9NQG7 AC005829.2-201ENST00000571422 1056 ntBASIC20.99■□□□□ 0.95
HPS4Q9NQG7 ANAPC11-223ENST00000612413 964 ntTSL 3 BASIC20.99■□□□□ 0.95
HPS4Q9NQG7 AC006557.6-201ENST00000623071 864 ntBASIC20.99■□□□□ 0.95
HPS4Q9NQG7 PRICKLE3-206ENST00000599218 2062 ntAPPRIS P3 TSL 1 (best) BASIC20.99■□□□□ 0.95
HPS4Q9NQG7 PAXIP1-AS1-201ENST00000608317 2256 ntBASIC20.99■□□□□ 0.95
HPS4Q9NQG7 FBXL14-201ENST00000339235 2111 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
HPS4Q9NQG7 RAPH1-210ENST00000453034 2394 ntAPPRIS ALT2 TSL 1 (best) BASIC20.99■□□□□ 0.95
HPS4Q9NQG7 AMZ1-202ENST00000407112 1862 ntTSL 2 BASIC20.98■□□□□ 0.95
HPS4Q9NQG7 KMT2B-201ENST00000420124 8469 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
HPS4Q9NQG7 ATG4D-201ENST00000309469 1949 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
HPS4Q9NQG7 PPP3CC-202ENST00000289963 2135 ntAPPRIS ALT1 TSL 1 (best) BASIC20.98■□□□□ 0.95
HPS4Q9NQG7 PALM-207ENST00000590161 2137 ntTSL 4 BASIC20.98■□□□□ 0.95
HPS4Q9NQG7 CAV3-201ENST00000343849 1431 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
HPS4Q9NQG7 CNNM4-201ENST00000377075 4800 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
HPS4Q9NQG7 GNA11-201ENST00000078429 4147 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
HPS4Q9NQG7 FAM98C-201ENST00000252530 1271 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
HPS4Q9NQG7 POMC-201ENST00000264708 1074 ntAPPRIS P1 TSL 2 BASIC20.98■□□□□ 0.95
HPS4Q9NQG7 PRSS57-201ENST00000329267 1025 ntAPPRIS ALT2 TSL 1 (best) BASIC20.98■□□□□ 0.95
HPS4Q9NQG7 CLTA-202ENST00000345519 1073 ntAPPRIS ALT1 TSL 1 (best) BASIC20.98■□□□□ 0.95
HPS4Q9NQG7 RNF5-203ENST00000375094 1168 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
HPS4Q9NQG7 RHOG-202ENST00000396978 1066 ntAPPRIS P1 TSL 3 BASIC20.98■□□□□ 0.95
HPS4Q9NQG7 SNORA78-201ENST00000459373 127 ntBASIC20.98■□□□□ 0.95
HPS4Q9NQG7 BCL2L10-202ENST00000561198 825 ntAPPRIS ALT2 TSL 1 (best) BASIC20.98■□□□□ 0.95
HPS4Q9NQG7 AC097641.1-201ENST00000580671 588 ntTSL 4 BASIC20.98■□□□□ 0.95
HPS4Q9NQG7 FAM98C-205ENST00000588262 826 ntTSL 1 (best) BASIC20.98■□□□□ 0.95
HPS4Q9NQG7 PRSS57-202ENST00000613411 1090 ntAPPRIS P3 TSL 1 (best) BASIC20.98■□□□□ 0.95
HPS4Q9NQG7 AC120498.8-201ENST00000614275 531 ntBASIC20.98■□□□□ 0.95
HPS4Q9NQG7 DNAJC25-201ENST00000313525 2268 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
HPS4Q9NQG7 ABCG4-204ENST00000615496 2459 ntAPPRIS P1 TSL 2 BASIC20.98■□□□□ 0.95
HPS4Q9NQG7 CSNK1G2-201ENST00000255641 2918 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
HPS4Q9NQG7 EIF2B4-211ENST00000616081 1754 ntTSL 5 BASIC20.97■□□□□ 0.95
HPS4Q9NQG7 RASGRP2-210ENST00000394430 2174 ntTSL 2 BASIC20.97■□□□□ 0.95
HPS4Q9NQG7 SLC18A3-201ENST00000374115 2420 ntAPPRIS P1 BASIC20.97■□□□□ 0.95
HPS4Q9NQG7 CDC42SE2-206ENST00000503291 2025 ntTSL 1 (best) BASIC20.97■□□□□ 0.95
HPS4Q9NQG7 GSN-204ENST00000373818 2657 ntTSL 1 (best) BASIC20.97■□□□□ 0.95
HPS4Q9NQG7 PAX1-202ENST00000444366 1850 ntAPPRIS ALT2 TSL 2 BASIC20.97■□□□□ 0.95
HPS4Q9NQG7 RHOT1-205ENST00000545287 2516 ntAPPRIS P4 TSL 5 BASIC20.97■□□□□ 0.95
HPS4Q9NQG7 BCKDK-201ENST00000219794 2128 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
HPS4Q9NQG7 COX7A2L-201ENST00000234301 1112 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
HPS4Q9NQG7 IMMP2L-201ENST00000331762 1205 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
HPS4Q9NQG7 SPATA2L-202ENST00000335360 1001 ntTSL 1 (best) BASIC20.97■□□□□ 0.95
HPS4Q9NQG7 SERF2-207ENST00000409614 582 ntTSL 2 BASIC20.97■□□□□ 0.95
HPS4Q9NQG7 METTL21A-207ENST00000442521 1003 ntAPPRIS P1 TSL 2 BASIC20.97■□□□□ 0.95
HPS4Q9NQG7 LINC00654-202ENST00000589201 579 ntTSL 3 BASIC20.97■□□□□ 0.95
HPS4Q9NQG7 ZNF302-215ENST00000627982 1723 ntAPPRIS ALT2 TSL 5 BASIC20.97■□□□□ 0.95
HPS4Q9NQG7 FUT4-201ENST00000358752 6059 ntAPPRIS P1 BASIC20.97■□□□□ 0.95
HPS4Q9NQG7 BABAM1-213ENST00000601043 1366 ntAPPRIS P3 TSL 2 BASIC20.97■□□□□ 0.95
HPS4Q9NQG7 TMEM178A-201ENST00000281961 1662 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
HPS4Q9NQG7 FDFT1-201ENST00000220584 2176 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
HPS4Q9NQG7 BORCS8-MEF2B-202ENST00000444486 1492 ntAPPRIS P2 TSL 2 BASIC20.96■□□□□ 0.95
HPS4Q9NQG7 SLCO3A1-202ENST00000424469 2705 ntTSL 1 (best) BASIC20.96■□□□□ 0.95
HPS4Q9NQG7 MOK-233ENST00000524214 1539 ntTSL 2 BASIC20.96■□□□□ 0.95
HPS4Q9NQG7 METTL27-201ENST00000297873 941 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
HPS4Q9NQG7 H3F3A-204ENST00000366816 799 ntAPPRIS P1 TSL 3 BASIC20.96■□□□□ 0.95
HPS4Q9NQG7 RALGPS1-206ENST00000394011 819 ntTSL 1 (best) BASIC20.96■□□□□ 0.95
HPS4Q9NQG7 RBCK1-213ENST00000475269 1200 ntTSL 1 (best) BASIC20.96■□□□□ 0.95
HPS4Q9NQG7 AC008443.1-203ENST00000505151 886 ntTSL 2 BASIC20.96■□□□□ 0.95
HPS4Q9NQG7 MCRIP1-203ENST00000538396 925 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
HPS4Q9NQG7 SMIM1-203ENST00000561886 491 ntTSL 2 BASIC20.96■□□□□ 0.95
HPS4Q9NQG7 CMTM3-207ENST00000564060 824 ntTSL 2 BASIC20.96■□□□□ 0.95
HPS4Q9NQG7 CMTM3-211ENST00000565922 615 ntTSL 1 (best) BASIC20.96■□□□□ 0.95
HPS4Q9NQG7 NTSR2-201ENST00000306928 1569 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
HPS4Q9NQG7 TSPAN3-210ENST00000561277 1592 ntTSL 5 BASIC20.96■□□□□ 0.95
HPS4Q9NQG7 MRPL4-202ENST00000307422 1320 ntAPPRIS P2 TSL 5 BASIC20.96■□□□□ 0.95
HPS4Q9NQG7 ORAI1-202ENST00000617316 2138 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
HPS4Q9NQG7 ZNF746-203ENST00000461958 5051 ntTSL 1 (best) BASIC20.96■□□□□ 0.95
HPS4Q9NQG7 SPESP1-201ENST00000310673 1431 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.95
HPS4Q9NQG7 DOK3-202ENST00000357198 1729 ntTSL 2 BASIC20.95■□□□□ 0.94
HPS4Q9NQG7 CRHR1-201ENST00000293493 2621 ntTSL 5 BASIC20.95■□□□□ 0.94
HPS4Q9NQG7 ANAPC1P1-202ENST00000616781 1771 ntTSL 1 (best) BASIC20.95■□□□□ 0.94
HPS4Q9NQG7 TRIM28-201ENST00000253024 2960 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
HPS4Q9NQG7 DYM-203ENST00000442713 2147 ntTSL 2 BASIC20.95■□□□□ 0.94
HPS4Q9NQG7 GPC1-202ENST00000420138 1835 ntTSL 5 BASIC20.95■□□□□ 0.94
HPS4Q9NQG7 FBL-201ENST00000221801 1160 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
HPS4Q9NQG7 MZB1-201ENST00000302125 825 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
HPS4Q9NQG7 CHCHD10-201ENST00000401675 691 ntAPPRIS P1 TSL 5 BASIC20.95■□□□□ 0.94
HPS4Q9NQG7 RAB29-203ENST00000414729 1157 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
HPS4Q9NQG7 AC079145.1-201ENST00000416575 541 ntTSL 2 BASIC20.95■□□□□ 0.94
HPS4Q9NQG7 EPHA5-AS1-202ENST00000509473 1177 ntTSL 1 (best) BASIC20.95■□□□□ 0.94
HPS4Q9NQG7 LY6E-205ENST00000519611 635 ntTSL 3 BASIC20.95■□□□□ 0.94
HPS4Q9NQG7 LY6E-212ENST00000522024 868 ntAPPRIS P2 TSL 5 BASIC20.95■□□□□ 0.94
HPS4Q9NQG7 AC105020.4-201ENST00000569467 563 ntTSL 4 BASIC20.95■□□□□ 0.94
HPS4Q9NQG7 FBXO17-202ENST00000595329 1299 ntAPPRIS P1 TSL 2 BASIC20.95■□□□□ 0.94
HPS4Q9NQG7 AC124016.1-201ENST00000609552 612 ntBASIC20.95■□□□□ 0.94
HPS4Q9NQG7 PTCRA-204ENST00000616441 1125 ntAPPRIS ALT2 TSL 2 BASIC20.95■□□□□ 0.94
HPS4Q9NQG7 AL023875.1-201ENST00000640777 796 ntBASIC20.95■□□□□ 0.94
HPS4Q9NQG7 KRT18P55-201ENST00000577198 1950 ntTSL 1 (best) BASIC20.95■□□□□ 0.94
HPS4Q9NQG7 GORASP1-220ENST00000479927 1345 ntTSL 2 BASIC20.95■□□□□ 0.94
HPS4Q9NQG7 CERKL-201ENST00000339098 1677 ntAPPRIS P3 TSL 1 (best) BASIC20.95■□□□□ 0.94
HPS4Q9NQG7 DNAJB11-202ENST00000439351 2398 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
HPS4Q9NQG7 SNX7-201ENST00000306121 1734 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
HPS4Q9NQG7 FNDC10-201ENST00000422725 2085 ntAPPRIS P1 BASIC20.95■□□□□ 0.94
HPS4Q9NQG7 PLPP5-203ENST00000424479 2130 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
HPS4Q9NQG7 SHISA7-201ENST00000376325 6033 ntAPPRIS P2 TSL 2 BASIC20.95■□□□□ 0.94
HPS4Q9NQG7 WIPF1-205ENST00000409415 1772 ntTSL 1 (best) BASIC20.95■□□□□ 0.94
HPS4Q9NQG7 ZDHHC24-203ENST00000526986 1424 ntTSL 1 (best) BASIC20.95■□□□□ 0.94
HPS4Q9NQG7 IRF3-221ENST00000598808 1468 ntTSL 5 BASIC20.94■□□□□ 0.94
HPS4Q9NQG7 MANEAL-203ENST00000397631 2327 ntTSL 1 (best) BASIC20.94■□□□□ 0.94
HPS4Q9NQG7 GPR27-201ENST00000304411 2447 ntAPPRIS P1 BASIC20.94■□□□□ 0.94
Retrieved 100 of 98,524 protein–RNA pairs in 52.4 ms