Protein–RNA interactions for Protein: Q9HBL6

LRTM1, Leucine-rich repeat and transmembrane domain-containing protein 1, humanhuman

Predictions only

Length 345 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRTM1Q9HBL6 HIST1H2AL-201ENST00000613174 393 ntAPPRIS P1 BASIC19.47■□□□□ 0.71
LRTM1Q9HBL6 TNFRSF11A-207ENST00000639222 855 ntAPPRIS ALT2 TSL 5 BASIC19.47■□□□□ 0.71
LRTM1Q9HBL6 MYCNOS-205ENST00000641950 531 ntBASIC19.47■□□□□ 0.71
LRTM1Q9HBL6 SEPT1-201ENST00000321367 1592 ntAPPRIS P1 TSL 5 BASIC19.47■□□□□ 0.71
LRTM1Q9HBL6 PARP2-202ENST00000429687 1881 ntAPPRIS ALT2 TSL 1 (best) BASIC19.47■□□□□ 0.71
LRTM1Q9HBL6 RAI14-201ENST00000265109 5092 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
LRTM1Q9HBL6 PYCR3-207ENST00000495276 2332 ntAPPRIS ALT2 TSL 1 (best) BASIC19.47■□□□□ 0.71
LRTM1Q9HBL6 CENPS-CORT-204ENST00000602296 1326 ntTSL 3 BASIC19.47■□□□□ 0.71
LRTM1Q9HBL6 KDF1-201ENST00000320567 1793 ntAPPRIS P1 TSL 2 BASIC19.47■□□□□ 0.71
LRTM1Q9HBL6 TGFBR1-201ENST00000374990 5720 ntTSL 1 (best) BASIC19.46■□□□□ 0.71
LRTM1Q9HBL6 FAM214B-203ENST00000378561 5771 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
LRTM1Q9HBL6 MKRN1-208ENST00000474576 1661 ntTSL 5 BASIC19.46■□□□□ 0.71
LRTM1Q9HBL6 LINC01558-202ENST00000495520 1652 ntTSL 2 BASIC19.46■□□□□ 0.71
LRTM1Q9HBL6 CRB2-202ENST00000373631 5550 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
LRTM1Q9HBL6 TAF7-201ENST00000313368 2334 ntAPPRIS P1 BASIC19.46■□□□□ 0.71
LRTM1Q9HBL6 ZGPAT-203ENST00000357119 1896 ntTSL 1 (best) BASIC19.46■□□□□ 0.71
LRTM1Q9HBL6 IL11RA-201ENST00000318041 1728 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
LRTM1Q9HBL6 HNRNPA3-204ENST00000435711 1731 ntAPPRIS P3 TSL 1 (best) BASIC19.46■□□□□ 0.71
LRTM1Q9HBL6 SOX2-201ENST00000325404 2513 ntAPPRIS P1 BASIC19.46■□□□□ 0.71
LRTM1Q9HBL6 PARP1-202ENST00000366792 553 ntTSL 3 BASIC19.46■□□□□ 0.71
LRTM1Q9HBL6 RASGRP2-203ENST00000377486 667 ntTSL 3 BASIC19.46■□□□□ 0.71
LRTM1Q9HBL6 AC016888.1-201ENST00000585285 565 ntTSL 3 BASIC19.46■□□□□ 0.71
LRTM1Q9HBL6 LINC01901-201ENST00000585822 1115 ntTSL 1 (best) BASIC19.46■□□□□ 0.71
LRTM1Q9HBL6 TPCN2-208ENST00000637342 2856 ntTSL 5 BASIC19.46■□□□□ 0.71
LRTM1Q9HBL6 WNT7B-202ENST00000409496 2285 ntAPPRIS ALT1 TSL 2 BASIC19.46■□□□□ 0.71
LRTM1Q9HBL6 GCH1-205ENST00000536224 1805 ntTSL 1 (best) BASIC19.46■□□□□ 0.71
LRTM1Q9HBL6 RASGRP2-211ENST00000394432 2304 ntAPPRIS P2 TSL 1 (best) BASIC19.46■□□□□ 0.71
LRTM1Q9HBL6 TSNAXIP1-202ENST00000415766 2338 ntAPPRIS ALT2 TSL 2 BASIC19.46■□□□□ 0.71
LRTM1Q9HBL6 DPP3P2-201ENST00000416030 1696 ntBASIC19.46■□□□□ 0.71
LRTM1Q9HBL6 ILDR2-207ENST00000529071 2566 ntAPPRIS ALT2 TSL 5 BASIC19.45■□□□□ 0.7
LRTM1Q9HBL6 IKZF1-209ENST00000438033 1748 ntTSL 2 BASIC19.45■□□□□ 0.7
LRTM1Q9HBL6 FASTK-217ENST00000540185 1609 ntTSL 5 BASIC19.45■□□□□ 0.7
LRTM1Q9HBL6 PNKP-215ENST00000600910 1600 ntTSL 5 BASIC19.45■□□□□ 0.7
LRTM1Q9HBL6 LYRM9-201ENST00000379102 501 ntAPPRIS P1 TSL 2 BASIC19.45■□□□□ 0.7
LRTM1Q9HBL6 SNRNP25-202ENST00000383018 1085 ntAPPRIS P2 TSL 1 (best) BASIC19.45■□□□□ 0.7
LRTM1Q9HBL6 LYRM9-206ENST00000508862 807 ntTSL 3 BASIC19.45■□□□□ 0.7
LRTM1Q9HBL6 SNAP23-214ENST00000567094 834 ntTSL 3 BASIC19.45■□□□□ 0.7
LRTM1Q9HBL6 RARRES2P6-201ENST00000567333 442 ntBASIC19.45■□□□□ 0.7
LRTM1Q9HBL6 DM1-AS-203ENST00000590076 730 ntTSL 4 BASIC19.45■□□□□ 0.7
LRTM1Q9HBL6 NAE1-201ENST00000290810 1837 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
LRTM1Q9HBL6 COQ10A-201ENST00000308197 1652 ntAPPRIS P3 TSL 1 (best) BASIC19.45■□□□□ 0.7
LRTM1Q9HBL6 EEF1DP3-201ENST00000428783 1309 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
LRTM1Q9HBL6 ACY1-207ENST00000476854 1319 ntTSL 3 BASIC19.45■□□□□ 0.7
LRTM1Q9HBL6 RTN1-202ENST00000342503 1703 ntAPPRIS ALT1 TSL 1 (best) BASIC19.45■□□□□ 0.7
LRTM1Q9HBL6 MBD1-216ENST00000587605 1945 ntTSL 2 BASIC19.45■□□□□ 0.7
LRTM1Q9HBL6 ITPKB-203ENST00000429204 6162 ntAPPRIS P1 TSL 5 BASIC19.45■□□□□ 0.7
LRTM1Q9HBL6 TMEM44-203ENST00000381975 2197 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
LRTM1Q9HBL6 CASKIN1-201ENST00000343516 5759 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
LRTM1Q9HBL6 EPHA10-202ENST00000373048 5425 ntAPPRIS P2 TSL 5 BASIC19.44■□□□□ 0.7
LRTM1Q9HBL6 ZIM2-208ENST00000629319 2253 ntAPPRIS P1 TSL 5 BASIC19.44■□□□□ 0.7
LRTM1Q9HBL6 FBXL17-205ENST00000542267 5188 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
LRTM1Q9HBL6 CAPZB-205ENST00000433834 1462 ntTSL 2 BASIC19.44■□□□□ 0.7
LRTM1Q9HBL6 GADD45A-201ENST00000370985 803 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
LRTM1Q9HBL6 AC097381.1-201ENST00000429019 1296 ntBASIC19.44■□□□□ 0.7
LRTM1Q9HBL6 LINC00472-204ENST00000436803 667 ntTSL 5 BASIC19.44■□□□□ 0.7
LRTM1Q9HBL6 AC105001.1-201ENST00000506149 821 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
LRTM1Q9HBL6 DISC1-224ENST00000639374 1071 ntAPPRIS ALT2 TSL 1 (best) BASIC19.44■□□□□ 0.7
LRTM1Q9HBL6 ZNF692-202ENST00000366471 1710 ntAPPRIS ALT2 TSL 1 (best) BASIC19.44■□□□□ 0.7
LRTM1Q9HBL6 ZNF821-211ENST00000564134 1748 ntTSL 5 BASIC19.44■□□□□ 0.7
LRTM1Q9HBL6 CPNE9-205ENST00000613455 1742 ntTSL 5 BASIC19.44■□□□□ 0.7
LRTM1Q9HBL6 CCDC74A-201ENST00000295171 1543 ntAPPRIS P3 TSL 1 (best) BASIC19.44■□□□□ 0.7
LRTM1Q9HBL6 CCDC74B-201ENST00000310463 1549 ntAPPRIS P3 TSL 2 BASIC19.44■□□□□ 0.7
LRTM1Q9HBL6 ISCA1-203ENST00000375991 1958 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
LRTM1Q9HBL6 FUT4-201ENST00000358752 6059 ntAPPRIS P1 BASIC19.44■□□□□ 0.7
LRTM1Q9HBL6 RUVBL2-206ENST00000595090 2009 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
LRTM1Q9HBL6 SPNS2-201ENST00000329078 3447 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
LRTM1Q9HBL6 PLAGL1-207ENST00000417959 1645 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
LRTM1Q9HBL6 GABRD-213ENST00000640067 1632 ntAPPRIS ALT2 TSL 5 BASIC19.43■□□□□ 0.7
LRTM1Q9HBL6 ILF3-217ENST00000589998 2622 ntTSL 2 BASIC19.43■□□□□ 0.7
LRTM1Q9HBL6 FGF2-201ENST00000264498 6775 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
LRTM1Q9HBL6 GNA12-201ENST00000275364 4378 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
LRTM1Q9HBL6 PROB1-201ENST00000434752 5122 ntAPPRIS P1 BASIC19.43■□□□□ 0.7
LRTM1Q9HBL6 ANKRD16-203ENST00000380094 2738 ntAPPRIS P1 TSL 2 BASIC19.43■□□□□ 0.7
LRTM1Q9HBL6 PAQR6-205ENST00000368270 1765 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
LRTM1Q9HBL6 C2orf50-202ENST00000405022 980 ntAPPRIS P1 TSL 2 BASIC19.43■□□□□ 0.7
LRTM1Q9HBL6 ATOX1-207ENST00000524142 749 ntAPPRIS P1 TSL 5 BASIC19.43■□□□□ 0.7
LRTM1Q9HBL6 AIPL1-206ENST00000571740 1202 ntAPPRIS ALT2 TSL 1 (best) BASIC19.43■□□□□ 0.7
LRTM1Q9HBL6 NTF6G-201ENST00000591094 616 ntBASIC19.43■□□□□ 0.7
LRTM1Q9HBL6 ACBD4-216ENST00000619916 1276 ntTSL 5 BASIC19.43■□□□□ 0.7
LRTM1Q9HBL6 AC244517.4-202ENST00000624089 484 ntTSL 3 BASIC19.43■□□□□ 0.7
LRTM1Q9HBL6 ENGASE-205ENST00000579016 2579 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
LRTM1Q9HBL6 CCDC88B-202ENST00000356786 4915 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
LRTM1Q9HBL6 SLC16A5-202ENST00000450736 2051 ntAPPRIS P2 TSL 1 (best) BASIC19.43■□□□□ 0.7
LRTM1Q9HBL6 DOCK9-206ENST00000427887 4176 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
LRTM1Q9HBL6 TBC1D9-201ENST00000442267 5306 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
LRTM1Q9HBL6 KMT5B-204ENST00000402185 1881 ntTSL 2 BASIC19.43■□□□□ 0.7
LRTM1Q9HBL6 CD247-201ENST00000362089 1609 ntAPPRIS P4 TSL 1 (best) BASIC19.43■□□□□ 0.7
LRTM1Q9HBL6 AL645608.1-202ENST00000417705 1389 ntTSL 3 BASIC19.43■□□□□ 0.7
LRTM1Q9HBL6 IGFBP1-203ENST00000468955 1369 ntTSL 5 BASIC19.43■□□□□ 0.7
LRTM1Q9HBL6 RBM26-207ENST00000622611 5230 ntTSL 2 BASIC19.43■□□□□ 0.7
LRTM1Q9HBL6 LINC00482-201ENST00000332012 2023 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
LRTM1Q9HBL6 CDC42SE2-206ENST00000503291 2025 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
LRTM1Q9HBL6 UBAP1-204ENST00000625521 2029 ntTSL 2 BASIC19.42■□□□□ 0.7
LRTM1Q9HBL6 ZNF582-202ENST00000586929 2053 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
LRTM1Q9HBL6 NRP2-206ENST00000417189 2386 ntTSL 2 BASIC19.42■□□□□ 0.7
LRTM1Q9HBL6 HOOK1-201ENST00000371208 5857 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
LRTM1Q9HBL6 NFIB-207ENST00000397579 3129 ntTSL 5 BASIC19.42■□□□□ 0.7
LRTM1Q9HBL6 UBE2C-201ENST00000243893 476 ntTSL 2 BASIC19.42■□□□□ 0.7
LRTM1Q9HBL6 TMEM243-201ENST00000257637 1063 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
LRTM1Q9HBL6 HACD1-201ENST00000326961 773 ntTSL 2 BASIC19.42■□□□□ 0.7
Retrieved 100 of 98,524 protein–RNA pairs in 55.3 ms