Protein–RNA interactions for Protein: Q9H9A6

LRRC40, Leucine-rich repeat-containing protein 40, humanhuman

Predictions only

Length 602 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRRC40Q9H9A6 IDH1-205ENST00000446179 2298 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
LRRC40Q9H9A6 SPATA22-210ENST00000573128 1704 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
LRRC40Q9H9A6 CSPG5-203ENST00000456150 2089 ntTSL 1 (best) BASIC20.58■□□□□ 0.89
LRRC40Q9H9A6 MYL5-206ENST00000506838 2956 ntTSL 2 BASIC20.58■□□□□ 0.89
LRRC40Q9H9A6 AL391422.3-201ENST00000603791 2761 ntBASIC20.58■□□□□ 0.89
LRRC40Q9H9A6 RAVER2-201ENST00000294428 4398 ntAPPRIS ALT2 TSL 5 BASIC20.58■□□□□ 0.89
LRRC40Q9H9A6 VRK2-207ENST00000440705 1676 ntAPPRIS ALT2 TSL 1 (best) BASIC20.58■□□□□ 0.89
LRRC40Q9H9A6 USP39-204ENST00000409766 2033 ntTSL 2 BASIC20.58■□□□□ 0.89
LRRC40Q9H9A6 ST3GAL5-202ENST00000377332 2165 ntTSL 5 BASIC20.58■□□□□ 0.89
LRRC40Q9H9A6 CYP21A1P-202ENST00000354927 1481 ntBASIC20.58■□□□□ 0.89
LRRC40Q9H9A6 B4GALNT1-208ENST00000550764 1967 ntTSL 1 (best) BASIC20.58■□□□□ 0.89
LRRC40Q9H9A6 PAQR9-201ENST00000340634 2452 ntAPPRIS P1 BASIC20.58■□□□□ 0.89
LRRC40Q9H9A6 RASGRP2-209ENST00000394429 453 ntTSL 3 BASIC20.58■□□□□ 0.89
LRRC40Q9H9A6 AC005789.1-201ENST00000585411 297 ntTSL 3 BASIC20.58■□□□□ 0.89
LRRC40Q9H9A6 CAPNS1-205ENST00000588780 1035 ntAPPRIS ALT2 TSL 5 BASIC20.58■□□□□ 0.89
LRRC40Q9H9A6 DTX2-212ENST00000446820 1770 ntAPPRIS ALT2 TSL 1 (best) BASIC20.58■□□□□ 0.89
LRRC40Q9H9A6 FGF2-202ENST00000608478 3880 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.88
LRRC40Q9H9A6 SAC3D1-205ENST00000531072 1362 ntAPPRIS P1 TSL 2 BASIC20.58■□□□□ 0.88
LRRC40Q9H9A6 ADA-201ENST00000372874 1539 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.88
LRRC40Q9H9A6 MAG-203ENST00000537831 2341 ntTSL 1 (best) BASIC20.58■□□□□ 0.88
LRRC40Q9H9A6 CTNND2-201ENST00000304623 5481 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
LRRC40Q9H9A6 TPBGL-201ENST00000562197 2793 ntAPPRIS P1 BASIC20.57■□□□□ 0.88
LRRC40Q9H9A6 MAPK15-201ENST00000338033 1961 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
LRRC40Q9H9A6 BCAM-201ENST00000270233 2402 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
LRRC40Q9H9A6 RAB5A-201ENST00000273047 2536 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
LRRC40Q9H9A6 CITED1-201ENST00000246139 1231 ntAPPRIS P3 TSL 1 (best) BASIC20.57■□□□□ 0.88
LRRC40Q9H9A6 FOXI1-202ENST00000449804 2011 ntTSL 1 (best) BASIC20.57■□□□□ 0.88
LRRC40Q9H9A6 BX890604.1-207ENST00000486571 904 ntTSL 5 BASIC20.57■□□□□ 0.88
LRRC40Q9H9A6 AC007993.2-201ENST00000592842 521 ntTSL 4 BASIC20.57■□□□□ 0.88
LRRC40Q9H9A6 AL356652.1-201ENST00000615962 565 ntBASIC20.57■□□□□ 0.88
LRRC40Q9H9A6 AC093762.2-201ENST00000641700 291 ntAPPRIS P1 BASIC20.57■□□□□ 0.88
LRRC40Q9H9A6 CECR2-202ENST00000342247 6178 ntAPPRIS ALT2 TSL 5 BASIC20.57■□□□□ 0.88
LRRC40Q9H9A6 CHST8-203ENST00000438847 2133 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
LRRC40Q9H9A6 TPST2-202ENST00000398110 1968 ntAPPRIS P1 TSL 2 BASIC20.57■□□□□ 0.88
LRRC40Q9H9A6 RFT1-202ENST00000394738 1800 ntTSL 5 BASIC20.57■□□□□ 0.88
LRRC40Q9H9A6 GPR78-201ENST00000382487 1694 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
LRRC40Q9H9A6 FSCN2-202ENST00000417245 1665 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
LRRC40Q9H9A6 ZNF276-208ENST00000568064 2203 ntTSL 5 BASIC20.57■□□□□ 0.88
LRRC40Q9H9A6 P4HB-201ENST00000331483 2603 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
LRRC40Q9H9A6 MON1A-203ENST00000455683 1617 ntAPPRIS ALT2 TSL 1 (best) BASIC20.56■□□□□ 0.88
LRRC40Q9H9A6 DUSP18-205ENST00000404885 1306 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
LRRC40Q9H9A6 SOBP-201ENST00000317357 5245 ntAPPRIS P1 TSL 5 BASIC20.56■□□□□ 0.88
LRRC40Q9H9A6 SP9-201ENST00000394967 2554 ntAPPRIS P1 TSL 5 BASIC20.56■□□□□ 0.88
LRRC40Q9H9A6 AMZ1-202ENST00000407112 1862 ntTSL 2 BASIC20.56■□□□□ 0.88
LRRC40Q9H9A6 MARCH9-201ENST00000266643 2982 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
LRRC40Q9H9A6 KRTAP5-AS1-201ENST00000424148 2265 ntTSL 2 BASIC20.56■□□□□ 0.88
LRRC40Q9H9A6 SIMC1-203ENST00000429602 2694 ntAPPRIS ALT2 TSL 1 (best) BASIC20.56■□□□□ 0.88
LRRC40Q9H9A6 C19orf66-201ENST00000253110 2117 ntAPPRIS P3 TSL 2 BASIC20.56■□□□□ 0.88
LRRC40Q9H9A6 SLC39A5-209ENST00000454355 1968 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
LRRC40Q9H9A6 FAM189B-201ENST00000350210 2379 ntTSL 1 (best) BASIC20.56■□□□□ 0.88
LRRC40Q9H9A6 AC068338.2-201ENST00000563278 1430 ntBASIC20.56■□□□□ 0.88
LRRC40Q9H9A6 UTF1-201ENST00000304477 1157 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
LRRC40Q9H9A6 MRPL39-201ENST00000307301 1199 ntAPPRIS ALT2 TSL 5 BASIC20.56■□□□□ 0.88
LRRC40Q9H9A6 MRPL39-202ENST00000352957 1110 ntAPPRIS P3 TSL 1 (best) BASIC20.56■□□□□ 0.88
LRRC40Q9H9A6 TNFRSF18-203ENST00000379268 1179 ntAPPRIS ALT2 TSL 1 (best) BASIC20.56■□□□□ 0.88
LRRC40Q9H9A6 ZNRF2P2-202ENST00000442865 590 ntTSL 4 BASIC20.56■□□□□ 0.88
LRRC40Q9H9A6 RARRES2P4-201ENST00000514074 484 ntBASIC20.56■□□□□ 0.88
LRRC40Q9H9A6 RNASEH2B-206ENST00000611510 1257 ntTSL 5 BASIC20.56■□□□□ 0.88
LRRC40Q9H9A6 ZNF582-202ENST00000586929 2053 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
LRRC40Q9H9A6 PCDHB12-202ENST00000622978 2093 ntTSL 2 BASIC20.56■□□□□ 0.88
LRRC40Q9H9A6 GNA14-201ENST00000341700 2482 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
LRRC40Q9H9A6 AC099778.1-201ENST00000568593 1911 ntBASIC20.56■□□□□ 0.88
LRRC40Q9H9A6 CPNE9-205ENST00000613455 1742 ntTSL 5 BASIC20.56■□□□□ 0.88
LRRC40Q9H9A6 MAP7D2-203ENST00000443379 2476 ntAPPRIS ALT2 TSL 2 BASIC20.55■□□□□ 0.88
LRRC40Q9H9A6 STEAP1-201ENST00000297205 1313 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
LRRC40Q9H9A6 PRSS3-202ENST00000361005 966 ntTSL 1 (best) BASIC20.55■□□□□ 0.88
LRRC40Q9H9A6 FAM47E-204ENST00000510328 1002 ntAPPRIS ALT2 TSL 2 BASIC20.55■□□□□ 0.88
LRRC40Q9H9A6 AC106738.2-202ENST00000558156 533 ntTSL 4 BASIC20.55■□□□□ 0.88
LRRC40Q9H9A6 Z92544.1-201ENST00000567091 730 ntTSL 3 BASIC20.55■□□□□ 0.88
LRRC40Q9H9A6 C5AR2-202ENST00000600626 1287 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
LRRC40Q9H9A6 SUMF2-201ENST00000275607 1894 ntTSL 1 (best) BASIC20.55■□□□□ 0.88
LRRC40Q9H9A6 UXS1-203ENST00000409501 1839 ntAPPRIS P3 TSL 1 (best) BASIC20.55■□□□□ 0.88
LRRC40Q9H9A6 WNT10A-201ENST00000258411 2547 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
LRRC40Q9H9A6 PCBP4-212ENST00000484633 2009 ntTSL 5 BASIC20.54■□□□□ 0.88
LRRC40Q9H9A6 CYB561D2-205ENST00000425346 1319 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
LRRC40Q9H9A6 APLP2-204ENST00000345598 1862 ntTSL 1 (best) BASIC20.54■□□□□ 0.88
LRRC40Q9H9A6 OSR2-210ENST00000523368 1519 ntTSL 1 (best) BASIC20.54■□□□□ 0.88
LRRC40Q9H9A6 DPYSL5-202ENST00000401478 1972 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
LRRC40Q9H9A6 INTS12-206ENST00000451321 1975 ntTSL 1 (best) BASIC20.54■□□□□ 0.88
LRRC40Q9H9A6 GABRD-213ENST00000640067 1632 ntAPPRIS ALT2 TSL 5 BASIC20.54■□□□□ 0.88
LRRC40Q9H9A6 RASL12-201ENST00000220062 2640 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
LRRC40Q9H9A6 CBWD3-201ENST00000360171 2165 ntAPPRIS P2 TSL 1 (best) BASIC20.54■□□□□ 0.88
LRRC40Q9H9A6 SMG8-203ENST00000578922 2178 ntBASIC20.54■□□□□ 0.88
LRRC40Q9H9A6 IKZF1-209ENST00000438033 1748 ntTSL 2 BASIC20.54■□□□□ 0.88
LRRC40Q9H9A6 ZNF821-211ENST00000564134 1748 ntTSL 5 BASIC20.54■□□□□ 0.88
LRRC40Q9H9A6 SPG7-202ENST00000341316 2288 ntTSL 1 (best) BASIC20.54■□□□□ 0.88
LRRC40Q9H9A6 KHDC3L-201ENST00000370367 1018 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
LRRC40Q9H9A6 AP001363.2-201ENST00000538101 391 ntTSL 3 BASIC20.54■□□□□ 0.88
LRRC40Q9H9A6 ARFRP1-202ENST00000607873 1061 ntTSL 2 BASIC20.54■□□□□ 0.88
LRRC40Q9H9A6 AC100791.3-201ENST00000617619 330 ntBASIC20.54■□□□□ 0.88
LRRC40Q9H9A6 GDF6-203ENST00000621429 1179 ntTSL 5 BASIC20.54■□□□□ 0.88
LRRC40Q9H9A6 AC231657.2-201ENST00000624556 255 ntBASIC20.54■□□□□ 0.88
LRRC40Q9H9A6 SLC35A2-211ENST00000634461 533 ntTSL 4 BASIC20.54■□□□□ 0.88
LRRC40Q9H9A6 MRFAP1-201ENST00000320912 2049 ntAPPRIS P1 TSL 2 BASIC20.54■□□□□ 0.88
LRRC40Q9H9A6 KIAA0895L-206ENST00000563902 2233 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
LRRC40Q9H9A6 EPS8L1-201ENST00000201647 2536 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
LRRC40Q9H9A6 PQLC2-201ENST00000375153 2153 ntAPPRIS P1 TSL 2 BASIC20.53■□□□□ 0.88
LRRC40Q9H9A6 UAP1-201ENST00000271469 2377 ntAPPRIS ALT1 TSL 5 BASIC20.53■□□□□ 0.88
LRRC40Q9H9A6 INTS11-202ENST00000411962 1832 ntTSL 5 BASIC20.53■□□□□ 0.88
LRRC40Q9H9A6 DGKZ-214ENST00000527911 3337 ntAPPRIS ALT2 TSL 1 (best) BASIC20.53■□□□□ 0.88
Retrieved 100 of 98,524 protein–RNA pairs in 49.4 ms