Protein–RNA interactions for Protein: Q99569

PKP4, Plakophilin-4, humanhuman

Predictions only

Length 1,192 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PKP4Q99569 ETHE1-201ENST00000292147 963 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
PKP4Q99569 ODF3B-201ENST00000329363 970 ntAPPRIS P1 TSL 5 BASIC19.74■□□□□ 0.75
PKP4Q99569 AIDA-202ENST00000355727 1072 ntTSL 5 BASIC19.74■□□□□ 0.75
PKP4Q99569 SMNDC1-201ENST00000369592 1110 ntAPPRIS P1 TSL 3 BASIC19.74■□□□□ 0.75
PKP4Q99569 GPX1P1-201ENST00000388829 606 ntBASIC19.74■□□□□ 0.75
PKP4Q99569 CD8B-205ENST00000393761 932 ntTSL 1 (best) BASIC19.74■□□□□ 0.75
PKP4Q99569 CD8B-206ENST00000431506 692 ntAPPRIS ALT2 TSL 5 BASIC19.74■□□□□ 0.75
PKP4Q99569 ZNF696-204ENST00000520333 605 ntTSL 5 BASIC19.74■□□□□ 0.75
PKP4Q99569 TPT1-AS1-210ENST00000520590 873 ntTSL 5 BASIC19.74■□□□□ 0.75
PKP4Q99569 TMEM218-207ENST00000528724 1117 ntTSL 5 BASIC19.74■□□□□ 0.75
PKP4Q99569 TMEM218-214ENST00000532156 954 ntTSL 1 (best) BASIC19.74■□□□□ 0.75
PKP4Q99569 ANAPC11-212ENST00000577425 603 ntTSL 3 BASIC19.74■□□□□ 0.75
PKP4Q99569 CIRBP-214ENST00000587896 1081 ntTSL 2 BASIC19.74■□□□□ 0.75
PKP4Q99569 AC105020.6-201ENST00000621523 1217 ntBASIC19.74■□□□□ 0.75
PKP4Q99569 DNAJC7-203ENST00000457167 2022 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
PKP4Q99569 RPS6KL1-216ENST00000557413 2425 ntAPPRIS P1 TSL 5 BASIC19.74■□□□□ 0.75
PKP4Q99569 FAM120A-201ENST00000277165 5118 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
PKP4Q99569 TMEM44-204ENST00000392432 2490 ntTSL 1 (best) BASIC19.74■□□□□ 0.75
PKP4Q99569 ZXDC-201ENST00000336332 2579 ntAPPRIS ALT2 TSL 1 (best) BASIC19.73■□□□□ 0.75
PKP4Q99569 PLLP-201ENST00000219207 1512 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
PKP4Q99569 KCNA2-206ENST00000638477 1524 ntTSL 5 BASIC19.73■□□□□ 0.75
PKP4Q99569 DET1-207ENST00000564406 2315 ntTSL 2 BASIC19.73■□□□□ 0.75
PKP4Q99569 TMPO-201ENST00000261210 820 ntTSL 1 (best) BASIC19.73■□□□□ 0.75
PKP4Q99569 NCAPD3-204ENST00000526422 1060 ntAPPRIS ALT2 TSL 2 BASIC19.73■□□□□ 0.75
PKP4Q99569 CAMTA1-216ENST00000557126 486 ntTSL 2 BASIC19.73■□□□□ 0.75
PKP4Q99569 JOSD2-205ENST00000601423 802 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
PKP4Q99569 AC000035.1-201ENST00000634116 343 ntTSL 5 BASIC19.73■□□□□ 0.75
PKP4Q99569 ESYT2-201ENST00000251527 5960 ntAPPRIS P2 TSL 1 (best) BASIC19.73■□□□□ 0.75
PKP4Q99569 UNC119-202ENST00000335765 1424 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
PKP4Q99569 MEDAG-201ENST00000380482 2374 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
PKP4Q99569 GABRA2-214ENST00000515082 2366 ntTSL 1 (best) BASIC19.73■□□□□ 0.75
PKP4Q99569 ANKLE1-204ENST00000594072 2294 ntTSL 5 BASIC19.73■□□□□ 0.75
PKP4Q99569 FBXO31-207ENST00000618298 1871 ntTSL 5 BASIC19.73■□□□□ 0.75
PKP4Q99569 FAM129C-203ENST00000449408 2004 ntAPPRIS ALT2 TSL 2 BASIC19.73■□□□□ 0.75
PKP4Q99569 TTLL7-214ENST00000610996 2028 ntTSL 5 BASIC19.73■□□□□ 0.75
PKP4Q99569 AOC1-202ENST00000416793 2453 ntTSL 1 (best) BASIC19.73■□□□□ 0.75
PKP4Q99569 GLIPR2-203ENST00000396613 1917 ntTSL 4 BASIC19.72■□□□□ 0.75
PKP4Q99569 LINC01521-201ENST00000504184 1943 ntBASIC19.72■□□□□ 0.75
PKP4Q99569 ZNF582-202ENST00000586929 2053 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
PKP4Q99569 ME3-202ENST00000393324 2240 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
PKP4Q99569 LINC01011-201ENST00000445000 2811 ntTSL 2 BASIC19.72■□□□□ 0.75
PKP4Q99569 KLHL35-201ENST00000376292 1500 ntTSL 1 (best) BASIC19.72■□□□□ 0.75
PKP4Q99569 CERKL-201ENST00000339098 1677 ntAPPRIS P3 TSL 1 (best) BASIC19.72■□□□□ 0.75
PKP4Q99569 LMAN1L-202ENST00000379709 1699 ntTSL 1 (best) BASIC19.72■□□□□ 0.75
PKP4Q99569 RAB28-201ENST00000288723 1810 ntAPPRIS P3 TSL 1 (best) BASIC19.72■□□□□ 0.75
PKP4Q99569 GALNT10-202ENST00000377661 3778 ntTSL 5 BASIC19.72■□□□□ 0.75
PKP4Q99569 LRIG1-201ENST00000273261 5273 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
PKP4Q99569 NFS1-201ENST00000306750 738 ntTSL 1 (best) BASIC19.72■□□□□ 0.75
PKP4Q99569 FAM72A-203ENST00000367129 676 ntTSL 3 BASIC19.72■□□□□ 0.75
PKP4Q99569 BX276092.2-201ENST00000417668 665 ntBASIC19.72■□□□□ 0.75
PKP4Q99569 GUSBP6-202ENST00000438529 1198 ntBASIC19.72■□□□□ 0.75
PKP4Q99569 FAM72A-205ENST00000468509 629 ntTSL 5 BASIC19.72■□□□□ 0.75
PKP4Q99569 FBXL8-203ENST00000518148 1054 ntTSL 2 BASIC19.72■□□□□ 0.75
PKP4Q99569 CPNE9-205ENST00000613455 1742 ntTSL 5 BASIC19.72■□□□□ 0.75
PKP4Q99569 AL589743.5-201ENST00000616611 1050 ntBASIC19.72■□□□□ 0.75
PKP4Q99569 RIPPLY3-201ENST00000329553 2235 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
PKP4Q99569 SLC22A17-202ENST00000354772 2238 ntAPPRIS ALT2 TSL 1 (best) BASIC19.72■□□□□ 0.75
PKP4Q99569 FGFR2-224ENST00000613048 4369 ntTSL 5 BASIC19.72■□□□□ 0.75
PKP4Q99569 SLC2A8-215ENST00000610552 1763 ntTSL 3 BASIC19.72■□□□□ 0.75
PKP4Q99569 MAEA-213ENST00000510794 1607 ntTSL 2 BASIC19.72■□□□□ 0.75
PKP4Q99569 ETV7-203ENST00000373737 1488 ntAPPRIS ALT2 TSL 1 (best) BASIC19.72■□□□□ 0.75
PKP4Q99569 MAZ-214ENST00000568544 1464 ntTSL 2 BASIC19.72■□□□□ 0.75
PKP4Q99569 CCSAP-203ENST00000366687 5089 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
PKP4Q99569 ST3GAL4-204ENST00000444328 1812 ntAPPRIS ALT1 TSL 5 BASIC19.72■□□□□ 0.75
PKP4Q99569 SH3BGRL3-201ENST00000270792 1661 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
PKP4Q99569 FUZ-216ENST00000533418 1524 ntTSL 5 BASIC19.71■□□□□ 0.75
PKP4Q99569 FGF17-202ENST00000518533 1706 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
PKP4Q99569 SLC25A46-202ENST00000447245 1575 ntTSL 2 BASIC19.71■□□□□ 0.75
PKP4Q99569 CCS-208ENST00000533244 1430 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
PKP4Q99569 HSD17B10-202ENST00000375298 823 ntTSL 3 BASIC19.71■□□□□ 0.75
PKP4Q99569 ART5-202ENST00000397067 1154 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
PKP4Q99569 AC004882.1-201ENST00000416352 590 ntTSL 3 BASIC19.71■□□□□ 0.75
PKP4Q99569 TSPY6P-201ENST00000448518 926 ntBASIC19.71■□□□□ 0.75
PKP4Q99569 ELOVL2-AS1-201ENST00000456190 737 ntTSL 3 BASIC19.71■□□□□ 0.75
PKP4Q99569 AP000785.1-201ENST00000527314 613 ntTSL 4 BASIC19.71■□□□□ 0.75
PKP4Q99569 SCO2-203ENST00000535425 1002 ntAPPRIS P1 TSL 2 BASIC19.71■□□□□ 0.75
PKP4Q99569 GNAO1-211ENST00000570235 568 ntTSL 2 BASIC19.71■□□□□ 0.75
PKP4Q99569 ALDH3A2-224ENST00000626500 995 ntTSL 5 BASIC19.71■□□□□ 0.75
PKP4Q99569 ARSE-205ENST00000540563 1990 ntTSL 2 BASIC19.71■□□□□ 0.75
PKP4Q99569 ACHE-207ENST00000428317 2159 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
PKP4Q99569 NAPSA-201ENST00000253719 1548 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
PKP4Q99569 FBXO6-201ENST00000376753 1520 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
PKP4Q99569 KREMEN2-201ENST00000303746 2326 ntAPPRIS P4 TSL 1 (best) BASIC19.7■□□□□ 0.74
PKP4Q99569 NDOR1-201ENST00000344894 1794 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
PKP4Q99569 PPP4R2-201ENST00000356692 4984 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
PKP4Q99569 KCNMB4-201ENST00000258111 4731 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
PKP4Q99569 NF2-201ENST00000334961 2020 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
PKP4Q99569 AL158151.1-201ENST00000372490 2047 ntTSL 2 BASIC19.7■□□□□ 0.74
PKP4Q99569 FOXI1-202ENST00000449804 2011 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
PKP4Q99569 CLDN3-201ENST00000395145 1274 ntAPPRIS P1 BASIC19.7■□□□□ 0.74
PKP4Q99569 LSM12P1-201ENST00000411836 588 ntBASIC19.7■□□□□ 0.74
PKP4Q99569 MIPEPP3-201ENST00000412105 444 ntBASIC19.7■□□□□ 0.74
PKP4Q99569 SNAP23-210ENST00000564153 775 ntTSL 2 BASIC19.7■□□□□ 0.74
PKP4Q99569 ULK4P1-204ENST00000565949 721 ntTSL 4 BASIC19.7■□□□□ 0.74
PKP4Q99569 MARC2-201ENST00000359316 1335 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
PKP4Q99569 AFDN-202ENST00000351017 5823 ntTSL 5 BASIC19.7■□□□□ 0.74
PKP4Q99569 MYL5-206ENST00000506838 2956 ntTSL 2 BASIC19.7■□□□□ 0.74
PKP4Q99569 PCMT1-205ENST00000464889 1984 ntAPPRIS P3 TSL 1 (best) BASIC19.7■□□□□ 0.74
PKP4Q99569 AVPR2-202ENST00000358927 1763 ntAPPRIS P1 TSL 5 BASIC19.7■□□□□ 0.74
PKP4Q99569 MTFP1-201ENST00000266263 1370 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
Retrieved 100 of 98,524 protein–RNA pairs in 26.7 ms