Protein–RNA interactions for Protein: Q96L12

CALR3, Calreticulin-3, humanhuman

Known RBP Predictions only

Length 384 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CALR3Q96L12 AC069431.1-201ENST00000488882 1877 ntTSL 5 BASIC21.4■■□□□ 1.02
CALR3Q96L12 MARK2-204ENST00000402010 4728 ntAPPRIS ALT2 TSL 1 (best) BASIC21.4■■□□□ 1.02
CALR3Q96L12 TMEM179-206ENST00000616017 1645 ntBASIC21.4■■□□□ 1.02
CALR3Q96L12 ENPP7-201ENST00000328313 2043 ntAPPRIS P1 TSL 1 (best) BASIC21.39■■□□□ 1.02
CALR3Q96L12 DPF1-203ENST00000414789 1960 ntTSL 2 BASIC21.39■■□□□ 1.02
CALR3Q96L12 GPR137-201ENST00000313074 1485 ntTSL 5 BASIC21.39■■□□□ 1.02
CALR3Q96L12 GPR137-203ENST00000411458 1495 ntTSL 2 BASIC21.39■■□□□ 1.02
CALR3Q96L12 UBE2H-201ENST00000355621 5151 ntAPPRIS P1 TSL 1 (best) BASIC21.39■■□□□ 1.02
CALR3Q96L12 MTFP1-201ENST00000266263 1370 ntAPPRIS P1 TSL 1 (best) BASIC21.39■■□□□ 1.02
CALR3Q96L12 YAP1-201ENST00000282441 5386 ntAPPRIS P3 TSL 1 (best) BASIC21.39■■□□□ 1.01
CALR3Q96L12 KRT7-201ENST00000331817 1754 ntAPPRIS P1 TSL 1 (best) BASIC21.39■■□□□ 1.01
CALR3Q96L12 ASPG-201ENST00000546892 1791 ntAPPRIS ALT2 TSL 1 (best) BASIC21.39■■□□□ 1.01
CALR3Q96L12 AC019069.1-201ENST00000610008 1333 ntBASIC21.39■■□□□ 1.01
CALR3Q96L12 DNASE1L2-203ENST00000564065 2194 ntTSL 1 (best) BASIC21.39■■□□□ 1.01
CALR3Q96L12 JSRP1-201ENST00000300961 1138 ntAPPRIS P1 TSL 2 BASIC21.39■■□□□ 1.01
CALR3Q96L12 COX20-201ENST00000366528 568 ntTSL 2 BASIC21.39■■□□□ 1.01
CALR3Q96L12 AC009086.2-201ENST00000449759 610 ntAPPRIS P1 TSL 3 BASIC21.39■■□□□ 1.01
CALR3Q96L12 NDUFB2-207ENST00000465506 1101 ntAPPRIS P1 TSL 1 (best) BASIC21.39■■□□□ 1.01
CALR3Q96L12 SEC23A-213ENST00000557280 561 ntTSL 4 BASIC21.39■■□□□ 1.01
CALR3Q96L12 LRRC37A17P-202ENST00000570478 572 ntTSL 4 BASIC21.39■■□□□ 1.01
CALR3Q96L12 C19orf84-201ENST00000570516 788 ntAPPRIS ALT2 TSL 1 (best) BASIC21.39■■□□□ 1.01
CALR3Q96L12 DLGAP4-204ENST00000373913 5056 ntAPPRIS P4 TSL 1 (best) BASIC21.39■■□□□ 1.01
CALR3Q96L12 HENMT1-203ENST00000402983 1696 ntAPPRIS P2 TSL 1 (best) BASIC21.39■■□□□ 1.01
CALR3Q96L12 FGFRL1-203ENST00000504138 1663 ntAPPRIS P1 TSL 1 (best) BASIC21.39■■□□□ 1.01
CALR3Q96L12 CD37-204ENST00000535669 1674 ntTSL 2 BASIC21.39■■□□□ 1.01
CALR3Q96L12 SCARB1-211ENST00000546215 1597 ntTSL 1 (best) BASIC21.39■■□□□ 1.01
CALR3Q96L12 ACOT2-204ENST00000613168 1553 ntAPPRIS P5 TSL 1 (best) BASIC21.39■■□□□ 1.01
CALR3Q96L12 STMN3-201ENST00000370053 2255 ntAPPRIS P1 TSL 1 (best) BASIC21.39■■□□□ 1.01
CALR3Q96L12 GPR62-201ENST00000322241 2191 ntAPPRIS P1 BASIC21.38■■□□□ 1.01
CALR3Q96L12 ADAP1-216ENST00000539900 2178 ntTSL 2 BASIC21.38■■□□□ 1.01
CALR3Q96L12 KCNC2-204ENST00000540018 2168 ntAPPRIS ALT2 TSL 2 BASIC21.38■■□□□ 1.01
CALR3Q96L12 SCARF2-202ENST00000622235 3232 ntAPPRIS ALT2 TSL 1 (best) BASIC21.38■■□□□ 1.01
CALR3Q96L12 SUGCT-202ENST00000401647 1369 ntTSL 1 (best) BASIC21.38■■□□□ 1.01
CALR3Q96L12 ZNF324B-202ENST00000545523 2368 ntAPPRIS P1 TSL 1 (best) BASIC21.38■■□□□ 1.01
CALR3Q96L12 ZBTB7A-201ENST00000322357 5422 ntAPPRIS P1 TSL 1 (best) BASIC21.38■■□□□ 1.01
CALR3Q96L12 AC093817.1-201ENST00000507296 812 ntTSL 3 BASIC21.38■■□□□ 1.01
CALR3Q96L12 GPX1-204ENST00000620890 897 ntAPPRIS ALT2 TSL 5 BASIC21.38■■□□□ 1.01
CALR3Q96L12 ST7-OT4-201ENST00000397750 1576 ntTSL 1 (best) BASIC21.38■■□□□ 1.01
CALR3Q96L12 SUSD1-204ENST00000374270 3124 ntAPPRIS P3 TSL 1 (best) BASIC21.38■■□□□ 1.01
CALR3Q96L12 ST8SIA2-201ENST00000268164 5708 ntAPPRIS P1 TSL 1 (best) BASIC21.38■■□□□ 1.01
CALR3Q96L12 FOXL2-201ENST00000330315 2917 ntAPPRIS P1 BASIC21.38■■□□□ 1.01
CALR3Q96L12 GFER-201ENST00000248114 2345 ntAPPRIS P1 TSL 1 (best) BASIC21.38■■□□□ 1.01
CALR3Q96L12 CLINT1-207ENST00000523908 2346 ntAPPRIS ALT1 TSL 1 (best) BASIC21.38■■□□□ 1.01
CALR3Q96L12 CXorf40A-204ENST00000423421 1403 ntAPPRIS P3 TSL 1 (best) BASIC21.38■■□□□ 1.01
CALR3Q96L12 PLSCR3-213ENST00000576362 1605 ntTSL 3 BASIC21.37■■□□□ 1.01
CALR3Q96L12 CENPS-CORT-204ENST00000602296 1326 ntTSL 3 BASIC21.37■■□□□ 1.01
CALR3Q96L12 AC104581.1-201ENST00000324348 2852 ntAPPRIS P1 TSL 2 BASIC21.37■■□□□ 1.01
CALR3Q96L12 JTB-203ENST00000368589 1216 ntTSL 2 BASIC21.37■■□□□ 1.01
CALR3Q96L12 TMEM54-202ENST00000373463 999 ntAPPRIS P1 TSL 1 (best) BASIC21.37■■□□□ 1.01
CALR3Q96L12 ATPIF1-203ENST00000468425 539 ntTSL 2 BASIC21.37■■□□□ 1.01
CALR3Q96L12 AC008073.3-201ENST00000610442 2281 ntAPPRIS P1 TSL 2 BASIC21.37■■□□□ 1.01
CALR3Q96L12 CPNE9-205ENST00000613455 1742 ntTSL 5 BASIC21.37■■□□□ 1.01
CALR3Q96L12 SET-201ENST00000322030 2915 ntAPPRIS P1 TSL 1 (best) BASIC21.37■■□□□ 1.01
CALR3Q96L12 IGLON5-201ENST00000270642 2606 ntAPPRIS P1 TSL 5 BASIC21.37■■□□□ 1.01
CALR3Q96L12 AL158211.5-201ENST00000623583 2518 ntBASIC21.36■■□□□ 1.01
CALR3Q96L12 CDC14B-203ENST00000375242 2965 ntTSL 2 BASIC21.36■■□□□ 1.01
CALR3Q96L12 WASH6P-203ENST00000460206 1826 ntTSL 5 BASIC21.36■■□□□ 1.01
CALR3Q96L12 TPD52-209ENST00000518937 2856 ntTSL 2 BASIC21.36■■□□□ 1.01
CALR3Q96L12 ISLR2-204ENST00000453268 2812 ntAPPRIS P1 TSL 1 (best) BASIC21.36■■□□□ 1.01
CALR3Q96L12 LRRC25-202ENST00000595840 1924 ntAPPRIS P1 TSL 1 (best) BASIC21.36■■□□□ 1.01
CALR3Q96L12 KRT19P1-201ENST00000405746 1186 ntBASIC21.36■■□□□ 1.01
CALR3Q96L12 COL19A1-203ENST00000478620 589 ntTSL 1 (best) BASIC21.36■■□□□ 1.01
CALR3Q96L12 F2RL3-202ENST00000599210 613 ntTSL 2 BASIC21.36■■□□□ 1.01
CALR3Q96L12 TFG-210ENST00000620299 1289 ntTSL 5 BASIC21.36■■□□□ 1.01
CALR3Q96L12 NCLN-205ENST00000590671 2070 ntTSL 2 BASIC21.36■■□□□ 1.01
CALR3Q96L12 MMP11-201ENST00000215743 2291 ntAPPRIS P1 TSL 1 (best) BASIC21.36■■□□□ 1.01
CALR3Q96L12 USP45-202ENST00000329966 1444 ntTSL 1 (best) BASIC21.36■■□□□ 1.01
CALR3Q96L12 CRTC1-204ENST00000601916 1834 ntTSL 5 BASIC21.36■■□□□ 1.01
CALR3Q96L12 GPR35-202ENST00000403859 2032 ntAPPRIS P3 TSL 2 BASIC21.36■■□□□ 1.01
CALR3Q96L12 POLD2-202ENST00000406581 2158 ntAPPRIS P1 TSL 2 BASIC21.36■■□□□ 1.01
CALR3Q96L12 DMPK-203ENST00000354227 1982 ntTSL 2 BASIC21.36■■□□□ 1.01
CALR3Q96L12 CNIH2-201ENST00000311445 1356 ntAPPRIS P2 TSL 1 (best) BASIC21.36■■□□□ 1.01
CALR3Q96L12 IKBIP-203ENST00000393042 1368 ntTSL 1 (best) BASIC21.36■■□□□ 1.01
CALR3Q96L12 SPINT2-202ENST00000454580 1367 ntTSL 1 (best) BASIC21.36■■□□□ 1.01
CALR3Q96L12 RBAK-202ENST00000396912 6551 ntAPPRIS P1 TSL 1 (best) BASIC21.35■■□□□ 1.01
CALR3Q96L12 AP3S1-201ENST00000316788 1730 ntAPPRIS P1 TSL 1 (best) BASIC21.35■■□□□ 1.01
CALR3Q96L12 SLC39A4-201ENST00000276833 2297 ntTSL 2 BASIC21.35■■□□□ 1.01
CALR3Q96L12 ZNF582-202ENST00000586929 2053 ntAPPRIS P1 TSL 1 (best) BASIC21.35■■□□□ 1.01
CALR3Q96L12 BAALC-203ENST00000309982 2831 ntAPPRIS P1 TSL 1 (best) BASIC21.35■■□□□ 1.01
CALR3Q96L12 TMPRSS6-207ENST00000442782 1695 ntTSL 1 (best) BASIC21.35■■□□□ 1.01
CALR3Q96L12 GATA1-202ENST00000376670 1497 ntAPPRIS P1 TSL 1 (best) BASIC21.35■■□□□ 1.01
CALR3Q96L12 LINC00482-201ENST00000332012 2023 ntTSL 1 (best) BASIC21.35■■□□□ 1.01
CALR3Q96L12 TPSG1-201ENST00000234798 1108 ntAPPRIS P1 TSL 1 (best) BASIC21.35■■□□□ 1.01
CALR3Q96L12 CYC1-201ENST00000318911 1240 ntAPPRIS P1 TSL 1 (best) BASIC21.35■■□□□ 1.01
CALR3Q96L12 MAP1LC3A-202ENST00000374837 961 ntTSL 3 BASIC21.35■■□□□ 1.01
CALR3Q96L12 KRTAP5-2-201ENST00000412090 1118 ntAPPRIS P1 BASIC21.35■■□□□ 1.01
CALR3Q96L12 CROT-202ENST00000412227 1213 ntTSL 1 (best) BASIC21.35■■□□□ 1.01
CALR3Q96L12 BCAP29-209ENST00000465919 942 ntTSL 2 BASIC21.35■■□□□ 1.01
CALR3Q96L12 AP006621.1-202ENST00000528982 464 ntTSL 2 BASIC21.35■■□□□ 1.01
CALR3Q96L12 GABARAPL2-205ENST00000568455 646 ntTSL 3 BASIC21.35■■□□□ 1.01
CALR3Q96L12 SLC35A3-222ENST00000640715 1989 ntTSL 5 BASIC21.35■■□□□ 1.01
CALR3Q96L12 ASCC1-205ENST00000394919 2683 ntAPPRIS P1 TSL 2 BASIC21.35■■□□□ 1.01
CALR3Q96L12 PDE9A-212ENST00000398234 1783 ntTSL 1 (best) BASIC21.35■■□□□ 1.01
CALR3Q96L12 MAPKAPK2-202ENST00000367103 2961 ntAPPRIS P1 TSL 1 (best) BASIC21.35■■□□□ 1.01
CALR3Q96L12 PCBP3-203ENST00000400308 1911 ntTSL 1 (best) BASIC21.35■■□□□ 1.01
CALR3Q96L12 DPH1-201ENST00000263083 2221 ntAPPRIS P2 TSL 1 (best) BASIC21.35■■□□□ 1.01
CALR3Q96L12 NDRG2-242ENST00000555158 2216 ntAPPRIS ALT1 TSL 1 (best) BASIC21.35■■□□□ 1.01
CALR3Q96L12 KMT5B-204ENST00000402185 1881 ntTSL 2 BASIC21.35■■□□□ 1.01
CALR3Q96L12 NAB2-201ENST00000300131 2711 ntAPPRIS P1 TSL 1 (best) BASIC21.35■■□□□ 1.01
CALR3Q96L12 ADA-201ENST00000372874 1539 ntAPPRIS P1 TSL 1 (best) BASIC21.34■■□□□ 1.01
Retrieved 100 of 98,524 protein–RNA pairs in 25.8 ms