Protein–RNA interactions for Protein: Q96K30

RITA1, RBPJ-interacting and tubulin-associated protein 1, humanhuman

Predictions only

Length 269 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RITA1Q96K30 OGG1-202ENST00000302008 2191 ntAPPRIS ALT2 TSL 5 BASIC16.3■□□□□ 0.2
RITA1Q96K30 EGLN2-202ENST00000406058 2150 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
RITA1Q96K30 GABRD-213ENST00000640067 1632 ntAPPRIS ALT2 TSL 5 BASIC16.3■□□□□ 0.2
RITA1Q96K30 PQLC2-203ENST00000400548 1548 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
RITA1Q96K30 PACSIN3-211ENST00000539589 2009 ntAPPRIS P1 TSL 2 BASIC16.29■□□□□ 0.2
RITA1Q96K30 NPDC1-202ENST00000371601 1494 ntAPPRIS P2 TSL 1 (best) BASIC16.29■□□□□ 0.2
RITA1Q96K30 SAP30L-201ENST00000297109 6226 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
RITA1Q96K30 CXorf40A-204ENST00000423421 1403 ntAPPRIS P3 TSL 1 (best) BASIC16.29■□□□□ 0.2
RITA1Q96K30 FBXO31-207ENST00000618298 1871 ntTSL 5 BASIC16.29■□□□□ 0.2
RITA1Q96K30 NAB2-202ENST00000342556 2318 ntTSL 5 BASIC16.29■□□□□ 0.2
RITA1Q96K30 GRTP1-203ENST00000375431 1384 ntAPPRIS P3 TSL 1 (best) BASIC16.29■□□□□ 0.2
RITA1Q96K30 IDH1-205ENST00000446179 2298 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
RITA1Q96K30 EYA2-202ENST00000327619 2702 ntAPPRIS P1 TSL 2 BASIC16.29■□□□□ 0.2
RITA1Q96K30 PQLC2-201ENST00000375153 2153 ntAPPRIS P1 TSL 2 BASIC16.29■□□□□ 0.2
RITA1Q96K30 CPNE9-205ENST00000613455 1742 ntTSL 5 BASIC16.29■□□□□ 0.2
RITA1Q96K30 FGF2-202ENST00000608478 3880 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
RITA1Q96K30 CNR1-203ENST00000369501 6031 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
RITA1Q96K30 RPLP0-201ENST00000228306 1257 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
RITA1Q96K30 TPSAB1-201ENST00000338844 1175 ntAPPRIS P2 TSL 1 (best) BASIC16.29■□□□□ 0.2
RITA1Q96K30 RBP4-201ENST00000371464 1068 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
RITA1Q96K30 MCRIP2P1-201ENST00000394346 511 ntBASIC16.29■□□□□ 0.2
RITA1Q96K30 BET1L-204ENST00000410108 637 ntTSL 3 BASIC16.29■□□□□ 0.2
RITA1Q96K30 AC062017.1-203ENST00000413029 455 ntTSL 2 BASIC16.29■□□□□ 0.2
RITA1Q96K30 AL645608.9-201ENST00000442292 829 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
RITA1Q96K30 HTT-AS-201ENST00000503893 515 ntTSL 4 BASIC16.29■□□□□ 0.2
RITA1Q96K30 AC012313.6-201ENST00000599889 790 ntTSL 3 BASIC16.29■□□□□ 0.2
RITA1Q96K30 OR10C1-204ENST00000622521 1039 ntBASIC16.29■□□□□ 0.2
RITA1Q96K30 SH3BGRL3-201ENST00000270792 1661 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
RITA1Q96K30 ST6GAL2-203ENST00000409087 1657 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
RITA1Q96K30 MAP3K14-AS1-203ENST00000585780 2475 ntTSL 2 BASIC16.29■□□□□ 0.2
RITA1Q96K30 RARA-201ENST00000254066 2414 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
RITA1Q96K30 RNF40-201ENST00000324685 5634 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
RITA1Q96K30 B4GALNT1-208ENST00000550764 1967 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
RITA1Q96K30 SMUG1-202ENST00000337581 1571 ntAPPRIS P1 TSL 2 BASIC16.29■□□□□ 0.2
RITA1Q96K30 CDC123-201ENST00000281141 1542 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
RITA1Q96K30 PDZD3-201ENST00000322712 2204 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
RITA1Q96K30 ETV7-203ENST00000373737 1488 ntAPPRIS ALT2 TSL 1 (best) BASIC16.29■□□□□ 0.2
RITA1Q96K30 TAF15-215ENST00000605844 2191 ntAPPRIS P3 TSL 1 (best) BASIC16.28■□□□□ 0.2
RITA1Q96K30 AC010980.2-201ENST00000587099 1412 ntBASIC16.28■□□□□ 0.2
RITA1Q96K30 GNA15-201ENST00000262958 2133 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
RITA1Q96K30 GNA14-201ENST00000341700 2482 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
RITA1Q96K30 PARD3-214ENST00000545693 5962 ntAPPRIS ALT2 TSL 1 (best) BASIC16.28■□□□□ 0.2
RITA1Q96K30 GYG1-202ENST00000345003 2052 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
RITA1Q96K30 TTC7A-201ENST00000319190 5157 ntAPPRIS P1 TSL 2 BASIC16.28■□□□□ 0.2
RITA1Q96K30 GCK-205ENST00000437084 1385 ntTSL 5 BASIC16.28■□□□□ 0.2
RITA1Q96K30 CACNA1H-202ENST00000358590 8069 ntAPPRIS ALT2 TSL 5 BASIC16.28■□□□□ 0.2
RITA1Q96K30 CABLES1-201ENST00000256925 5002 ntAPPRIS P4 TSL 1 (best) BASIC16.28■□□□□ 0.2
RITA1Q96K30 MAG-203ENST00000537831 2341 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
RITA1Q96K30 PCSK6-217ENST00000618548 4269 ntAPPRIS ALT2 TSL 1 (best) BASIC16.28■□□□□ 0.2
RITA1Q96K30 KRTAP5-AS1-201ENST00000424148 2265 ntTSL 2 BASIC16.28■□□□□ 0.2
RITA1Q96K30 MAEA-213ENST00000510794 1607 ntTSL 2 BASIC16.28■□□□□ 0.2
RITA1Q96K30 ODC1-202ENST00000405333 1943 ntAPPRIS P1 TSL 2 BASIC16.28■□□□□ 0.2
RITA1Q96K30 ADAP1-218ENST00000617043 1946 ntTSL 2 BASIC16.28■□□□□ 0.2
RITA1Q96K30 PPA1-202ENST00000373232 1295 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
RITA1Q96K30 MIR663A-201ENST00000385250 93 ntBASIC16.28■□□□□ 0.2
RITA1Q96K30 FTCDNL1-202ENST00000420128 1021 ntTSL 5 BASIC16.28■□□□□ 0.2
RITA1Q96K30 C12orf75-205ENST00000549893 719 ntTSL 3 BASIC16.28■□□□□ 0.2
RITA1Q96K30 BEAN1-AS1-201ENST00000564618 533 ntTSL 4 BASIC16.28■□□□□ 0.2
RITA1Q96K30 AL161421.1-201ENST00000619666 1101 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
RITA1Q96K30 POU5F1-209ENST00000638788 369 ntTSL 5 BASIC16.28■□□□□ 0.2
RITA1Q96K30 PLLP-201ENST00000219207 1512 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
RITA1Q96K30 CDK6-202ENST00000424848 1465 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
RITA1Q96K30 CPT2-203ENST00000635862 2319 ntTSL 5 BASIC16.28■□□□□ 0.2
RITA1Q96K30 SPATA22-210ENST00000573128 1704 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
RITA1Q96K30 AL390879.2-201ENST00000424306 2222 ntTSL 2 BASIC16.27■□□□□ 0.2
RITA1Q96K30 STARD3-202ENST00000394250 1949 ntTSL 2 BASIC16.27■□□□□ 0.2
RITA1Q96K30 CXCR3-202ENST00000373693 1624 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
RITA1Q96K30 GNG4-203ENST00000391854 5104 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
RITA1Q96K30 KREMEN2-202ENST00000319500 1882 ntAPPRIS ALT2 TSL 1 (best) BASIC16.27■□□□□ 0.2
RITA1Q96K30 RASL12-201ENST00000220062 2640 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
RITA1Q96K30 ZNF582-202ENST00000586929 2053 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
RITA1Q96K30 MTHFS-201ENST00000258874 907 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
RITA1Q96K30 KRT18P68-201ENST00000392293 1000 ntBASIC16.27■□□□□ 0.2
RITA1Q96K30 LINC01659-202ENST00000449711 917 ntTSL 3 BASIC16.27■□□□□ 0.2
RITA1Q96K30 AC100791.3-201ENST00000617619 330 ntBASIC16.27■□□□□ 0.2
RITA1Q96K30 ARSB-201ENST00000264914 5327 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
RITA1Q96K30 FGF17-202ENST00000518533 1706 ntTSL 1 (best) BASIC16.27■□□□□ 0.19
RITA1Q96K30 ACBD4-202ENST00000376955 1453 ntTSL 2 BASIC16.27■□□□□ 0.19
RITA1Q96K30 LEF1-203ENST00000438313 1488 ntAPPRIS ALT1 TSL 1 (best) BASIC16.27■□□□□ 0.19
RITA1Q96K30 MAZ-214ENST00000568544 1464 ntTSL 2 BASIC16.27■□□□□ 0.19
RITA1Q96K30 AC099778.1-201ENST00000568593 1911 ntBASIC16.27■□□□□ 0.19
RITA1Q96K30 DPP3P2-201ENST00000416030 1696 ntBASIC16.27■□□□□ 0.19
RITA1Q96K30 TACC3-213ENST00000617535 1693 ntTSL 5 BASIC16.27■□□□□ 0.19
RITA1Q96K30 PARD3-207ENST00000374788 5996 ntAPPRIS ALT1 TSL 1 (best) BASIC16.27■□□□□ 0.19
RITA1Q96K30 RNASET2-203ENST00000366855 1417 ntTSL 5 BASIC16.27■□□□□ 0.19
RITA1Q96K30 SH3D19-211ENST00000604030 5228 ntTSL 5 BASIC16.27■□□□□ 0.19
RITA1Q96K30 MFSD10-206ENST00000508221 1639 ntTSL 5 BASIC16.27■□□□□ 0.19
RITA1Q96K30 EPS8L1-201ENST00000201647 2536 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
RITA1Q96K30 NR1H2-211ENST00000599105 1830 ntAPPRIS ALT2 TSL 5 BASIC16.26■□□□□ 0.19
RITA1Q96K30 CYP27A1-201ENST00000258415 2286 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
RITA1Q96K30 SPG7-202ENST00000341316 2288 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
RITA1Q96K30 USP39-204ENST00000409766 2033 ntTSL 2 BASIC16.26■□□□□ 0.19
RITA1Q96K30 MAP7D2-203ENST00000443379 2476 ntAPPRIS ALT2 TSL 2 BASIC16.26■□□□□ 0.19
RITA1Q96K30 SLC25A46-202ENST00000447245 1575 ntTSL 2 BASIC16.26■□□□□ 0.19
RITA1Q96K30 MAP2K5-203ENST00000354498 1783 ntTSL 2 BASIC16.26■□□□□ 0.19
RITA1Q96K30 AC016065.1-201ENST00000500118 2413 ntTSL 2 BASIC16.26■□□□□ 0.19
RITA1Q96K30 GOLGA4-212ENST00000617480 1545 ntTSL 5 BASIC16.26■□□□□ 0.19
RITA1Q96K30 AC091230.1-202ENST00000564823 5356 ntTSL 2 BASIC16.26■□□□□ 0.19
RITA1Q96K30 GGTLC1-201ENST00000278765 974 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
RITA1Q96K30 ODF3B-201ENST00000329363 970 ntAPPRIS P1 TSL 5 BASIC16.26■□□□□ 0.19
Retrieved 100 of 98,524 protein–RNA pairs in 23 ms