Protein–RNA interactions for Protein: Q92499

DDX1, ATP-dependent RNA helicase DDX1, humanhuman

Known RBP Predictions only

Length 740 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DDX1Q92499 NCLN-205ENST00000590671 2070 ntTSL 2 BASIC21.62■■□□□ 1.05
DDX1Q92499 CD58-203ENST00000457047 1328 ntAPPRIS ALT2 TSL 1 (best) BASIC21.62■■□□□ 1.05
DDX1Q92499 C7orf43-201ENST00000316937 2520 ntAPPRIS P1 TSL 1 (best) BASIC21.62■■□□□ 1.05
DDX1Q92499 RELT-202ENST00000393580 2669 ntAPPRIS P1 TSL 1 (best) BASIC21.62■■□□□ 1.05
DDX1Q92499 DPYSL5-202ENST00000401478 1972 ntAPPRIS P1 TSL 1 (best) BASIC21.62■■□□□ 1.05
DDX1Q92499 CAPN10-202ENST00000270364 1267 ntTSL 2 BASIC21.62■■□□□ 1.05
DDX1Q92499 NUDT8-202ENST00000376693 728 ntAPPRIS ALT2 TSL 2 BASIC21.62■■□□□ 1.05
DDX1Q92499 KANSL1-AS1-201ENST00000398275 517 ntTSL 1 (best) BASIC21.62■■□□□ 1.05
DDX1Q92499 ZNRF2P2-202ENST00000442865 590 ntTSL 4 BASIC21.62■■□□□ 1.05
DDX1Q92499 DEUP1-206ENST00000530273 410 ntTSL 3 BASIC21.62■■□□□ 1.05
DDX1Q92499 AL356652.1-201ENST00000615962 565 ntBASIC21.62■■□□□ 1.05
DDX1Q92499 AP006294.2-201ENST00000641667 209 ntBASIC21.62■■□□□ 1.05
DDX1Q92499 AC133041.1-202ENST00000642053 222 ntBASIC21.62■■□□□ 1.05
DDX1Q92499 HDHD5-201ENST00000155674 1735 ntAPPRIS P3 TSL 1 (best) BASIC21.62■■□□□ 1.05
DDX1Q92499 FAM213A-202ENST00000372185 1723 ntTSL 2 BASIC21.62■■□□□ 1.05
DDX1Q92499 EGLN2-202ENST00000406058 2150 ntAPPRIS P1 TSL 1 (best) BASIC21.62■■□□□ 1.05
DDX1Q92499 SMG8-203ENST00000578922 2178 ntBASIC21.62■■□□□ 1.05
DDX1Q92499 IRX3-201ENST00000329734 2601 ntAPPRIS P1 TSL 1 (best) BASIC21.62■■□□□ 1.05
DDX1Q92499 STAU2-229ENST00000524300 3065 ntAPPRIS P4 TSL 2 BASIC21.62■■□□□ 1.05
DDX1Q92499 VRK2-207ENST00000440705 1676 ntAPPRIS ALT2 TSL 1 (best) BASIC21.62■■□□□ 1.05
DDX1Q92499 FBXW8-201ENST00000309909 2343 ntAPPRIS P1 TSL 1 (best) BASIC21.62■■□□□ 1.05
DDX1Q92499 APLP2-204ENST00000345598 1862 ntTSL 1 (best) BASIC21.62■■□□□ 1.05
DDX1Q92499 AL445183.2-201ENST00000439621 1871 ntTSL 2 BASIC21.62■■□□□ 1.05
DDX1Q92499 SPG7-202ENST00000341316 2288 ntTSL 1 (best) BASIC21.62■■□□□ 1.05
DDX1Q92499 TOR2A-201ENST00000336067 1370 ntTSL 2 BASIC21.61■■□□□ 1.05
DDX1Q92499 IKZF1-209ENST00000438033 1748 ntTSL 2 BASIC21.61■■□□□ 1.05
DDX1Q92499 MAP7D2-203ENST00000443379 2476 ntAPPRIS ALT2 TSL 2 BASIC21.61■■□□□ 1.05
DDX1Q92499 SUMF2-201ENST00000275607 1894 ntTSL 1 (best) BASIC21.61■■□□□ 1.05
DDX1Q92499 RPLP0-201ENST00000228306 1257 ntAPPRIS P1 TSL 1 (best) BASIC21.61■■□□□ 1.05
DDX1Q92499 TMPO-201ENST00000261210 820 ntTSL 1 (best) BASIC21.61■■□□□ 1.05
DDX1Q92499 PGPEP1L-201ENST00000378919 995 ntTSL 1 (best) BASIC21.61■■□□□ 1.05
DDX1Q92499 CYP2T1P-201ENST00000432607 1285 ntBASIC21.61■■□□□ 1.05
DDX1Q92499 BX890604.1-207ENST00000486571 904 ntTSL 5 BASIC21.61■■□□□ 1.05
DDX1Q92499 AC025754.1-201ENST00000507566 407 ntTSL 3 BASIC21.61■■□□□ 1.05
DDX1Q92499 C17orf97-203ENST00000571106 736 ntAPPRIS ALT2 TSL 2 BASIC21.61■■□□□ 1.05
DDX1Q92499 AC008750.8-201ENST00000600067 551 ntAPPRIS P1 TSL 5 BASIC21.61■■□□□ 1.05
DDX1Q92499 MAZ-216ENST00000616501 991 ntTSL 5 BASIC21.61■■□□□ 1.05
DDX1Q92499 AC100791.3-201ENST00000617619 330 ntBASIC21.61■■□□□ 1.05
DDX1Q92499 AC016065.1-201ENST00000500118 2413 ntTSL 2 BASIC21.61■■□□□ 1.05
DDX1Q92499 ACHE-204ENST00000412389 2218 ntAPPRIS P1 TSL 1 (best) BASIC21.61■■□□□ 1.05
DDX1Q92499 FOXI1-202ENST00000449804 2011 ntTSL 1 (best) BASIC21.61■■□□□ 1.05
DDX1Q92499 RRNAD1-202ENST00000368218 1802 ntAPPRIS ALT2 TSL 3 BASIC21.61■■□□□ 1.05
DDX1Q92499 TMPRSS5-212ENST00000545579 2163 ntAPPRIS ALT2 TSL 1 (best) BASIC21.61■■□□□ 1.05
DDX1Q92499 MRPL40-201ENST00000333130 1387 ntAPPRIS P1 TSL 1 (best) BASIC21.61■■□□□ 1.05
DDX1Q92499 GNA14-201ENST00000341700 2482 ntAPPRIS P1 TSL 1 (best) BASIC21.61■■□□□ 1.05
DDX1Q92499 GYG1-202ENST00000345003 2052 ntTSL 1 (best) BASIC21.6■■□□□ 1.05
DDX1Q92499 PCDHB12-202ENST00000622978 2093 ntTSL 2 BASIC21.6■■□□□ 1.05
DDX1Q92499 AC112907.3-201ENST00000577781 2400 ntBASIC21.6■■□□□ 1.05
DDX1Q92499 PLLP-201ENST00000219207 1512 ntAPPRIS P1 TSL 1 (best) BASIC21.6■■□□□ 1.05
DDX1Q92499 FSCN2-202ENST00000417245 1665 ntAPPRIS P1 TSL 1 (best) BASIC21.6■■□□□ 1.05
DDX1Q92499 SMIM10L2B-201ENST00000433425 2737 ntAPPRIS P1 TSL 1 (best) BASIC21.6■■□□□ 1.05
DDX1Q92499 TPCN2-209ENST00000637504 2736 ntTSL 5 BASIC21.6■■□□□ 1.05
DDX1Q92499 CCDC63-201ENST00000308208 1993 ntAPPRIS P3 TSL 2 BASIC21.6■■□□□ 1.05
DDX1Q92499 MON1A-203ENST00000455683 1617 ntAPPRIS ALT2 TSL 1 (best) BASIC21.6■■□□□ 1.05
DDX1Q92499 CHD1L-201ENST00000361293 2484 ntTSL 2 BASIC21.6■■□□□ 1.05
DDX1Q92499 ODF3B-201ENST00000329363 970 ntAPPRIS P1 TSL 5 BASIC21.6■■□□□ 1.05
DDX1Q92499 RBP4-201ENST00000371464 1068 ntAPPRIS P1 TSL 1 (best) BASIC21.6■■□□□ 1.05
DDX1Q92499 C19orf73-201ENST00000408991 744 ntAPPRIS P1 BASIC21.6■■□□□ 1.05
DDX1Q92499 LINC01659-202ENST00000449711 917 ntTSL 3 BASIC21.6■■□□□ 1.05
DDX1Q92499 RARRES1-204ENST00000479756 839 ntTSL 1 (best) BASIC21.6■■□□□ 1.05
DDX1Q92499 FAM47E-204ENST00000510328 1002 ntAPPRIS ALT2 TSL 2 BASIC21.6■■□□□ 1.05
DDX1Q92499 ARFRP1-202ENST00000607873 1061 ntTSL 2 BASIC21.6■■□□□ 1.05
DDX1Q92499 ITM2C-210ENST00000620962 501 ntBASIC21.6■■□□□ 1.05
DDX1Q92499 TBCB-214ENST00000629269 413 ntTSL 5 BASIC21.6■■□□□ 1.05
DDX1Q92499 AC093762.2-201ENST00000641700 291 ntAPPRIS P1 BASIC21.6■■□□□ 1.05
DDX1Q92499 CXorf40A-204ENST00000423421 1403 ntAPPRIS P3 TSL 1 (best) BASIC21.6■■□□□ 1.05
DDX1Q92499 NDRG2-242ENST00000555158 2216 ntAPPRIS ALT1 TSL 1 (best) BASIC21.6■■□□□ 1.05
DDX1Q92499 RASSF7-204ENST00000431809 1745 ntAPPRIS ALT2 TSL 5 BASIC21.6■■□□□ 1.05
DDX1Q92499 ENOSF1-201ENST00000251101 1867 ntAPPRIS P1 TSL 1 (best) BASIC21.6■■□□□ 1.05
DDX1Q92499 TSTA3-201ENST00000425753 1362 ntAPPRIS P1 TSL 1 (best) BASIC21.6■■□□□ 1.05
DDX1Q92499 PAQR9-201ENST00000340634 2452 ntAPPRIS P1 BASIC21.6■■□□□ 1.05
DDX1Q92499 KRTAP5-AS1-201ENST00000424148 2265 ntTSL 2 BASIC21.59■■□□□ 1.05
DDX1Q92499 MAEA-213ENST00000510794 1607 ntTSL 2 BASIC21.59■■□□□ 1.05
DDX1Q92499 GUK1-201ENST00000312726 1084 ntAPPRIS P3 TSL 1 (best) BASIC21.59■■□□□ 1.05
DDX1Q92499 KRT18P29-201ENST00000397031 1267 ntBASIC21.59■■□□□ 1.05
DDX1Q92499 PMPCB-202ENST00000428154 1714 ntTSL 1 (best) BASIC21.59■■□□□ 1.05
DDX1Q92499 AC069152.1-201ENST00000438030 544 ntBASIC21.59■■□□□ 1.05
DDX1Q92499 SPOCK3-204ENST00000502330 2180 ntAPPRIS ALT2 TSL 1 (best) BASIC21.59■■□□□ 1.05
DDX1Q92499 OAS3-207ENST00000551007 998 ntTSL 2 BASIC21.59■■□□□ 1.05
DDX1Q92499 AC106738.2-202ENST00000558156 533 ntTSL 4 BASIC21.59■■□□□ 1.05
DDX1Q92499 SERBP1-201ENST00000361219 2103 ntAPPRIS ALT1 TSL 1 (best) BASIC21.59■■□□□ 1.05
DDX1Q92499 IRF7-205ENST00000397574 1968 ntAPPRIS ALT2 TSL 1 (best) BASIC21.59■■□□□ 1.05
DDX1Q92499 MKRN1-208ENST00000474576 1661 ntTSL 5 BASIC21.59■■□□□ 1.05
DDX1Q92499 ZNF534-201ENST00000301085 1525 ntTSL 2 BASIC21.59■■□□□ 1.05
DDX1Q92499 EPS8L1-201ENST00000201647 2536 ntAPPRIS P1 TSL 1 (best) BASIC21.59■■□□□ 1.05
DDX1Q92499 ZNF582-202ENST00000586929 2053 ntAPPRIS P1 TSL 1 (best) BASIC21.59■■□□□ 1.05
DDX1Q92499 ARHGEF4-202ENST00000355771 1872 ntAPPRIS ALT2 TSL 1 (best) BASIC21.58■■□□□ 1.05
DDX1Q92499 C19orf66-201ENST00000253110 2117 ntAPPRIS P3 TSL 2 BASIC21.58■■□□□ 1.05
DDX1Q92499 SLC39A5-209ENST00000454355 1968 ntAPPRIS P1 TSL 1 (best) BASIC21.58■■□□□ 1.05
DDX1Q92499 KCNQ2-201ENST00000344425 1426 ntTSL 1 (best) BASIC21.58■■□□□ 1.05
DDX1Q92499 PDZD3-201ENST00000322712 2204 ntTSL 1 (best) BASIC21.58■■□□□ 1.05
DDX1Q92499 KIAA0895L-206ENST00000563902 2233 ntAPPRIS P1 TSL 1 (best) BASIC21.58■■□□□ 1.05
DDX1Q92499 OIP5-201ENST00000220514 1236 ntAPPRIS P1 TSL 1 (best) BASIC21.58■■□□□ 1.05
DDX1Q92499 BHLHA15-201ENST00000314018 706 ntAPPRIS P1 BASIC21.58■■□□□ 1.05
DDX1Q92499 TRAPPC5-201ENST00000317378 790 ntAPPRIS P1 TSL 1 (best) BASIC21.58■■□□□ 1.05
DDX1Q92499 ASIP-201ENST00000374954 586 ntAPPRIS P1 TSL 1 (best) BASIC21.58■■□□□ 1.05
DDX1Q92499 STAG3L3-201ENST00000423834 1262 ntTSL 2 BASIC21.58■■□□□ 1.05
DDX1Q92499 AC007322.1-201ENST00000426983 750 ntBASIC21.58■■□□□ 1.05
DDX1Q92499 POU5F1P3-201ENST00000428824 1078 ntBASIC21.58■■□□□ 1.05
DDX1Q92499 AC073210.2-201ENST00000430369 194 ntBASIC21.58■■□□□ 1.05
Retrieved 100 of 98,524 protein–RNA pairs in 58.9 ms