Protein–RNA interactions for Protein: Q8WWV3

RTN4IP1, Reticulon-4-interacting protein 1, mitochondrial, humanhuman

Predicted RBP Predictions only

Length 396 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RTN4IP1Q8WWV3 SLC39A4-201ENST00000276833 2297 ntTSL 2 BASIC17■□□□□ 0.31
RTN4IP1Q8WWV3 SERPINF2-201ENST00000324015 2284 ntAPPRIS P1 TSL 5 BASIC17■□□□□ 0.31
RTN4IP1Q8WWV3 PDE4DIP-214ENST00000479408 2746 ntTSL 5 BASIC17■□□□□ 0.31
RTN4IP1Q8WWV3 DLEU7-201ENST00000400393 2092 ntAPPRIS P3 TSL 1 (best) BASIC17■□□□□ 0.31
RTN4IP1Q8WWV3 RGMB-207ENST00000513185 2052 ntAPPRIS ALT2 TSL 2 BASIC17■□□□□ 0.31
RTN4IP1Q8WWV3 AIRN-201ENST00000601203 4374 ntBASIC17■□□□□ 0.31
RTN4IP1Q8WWV3 PTPRE-201ENST00000254667 5331 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
RTN4IP1Q8WWV3 TCTEX1D4-201ENST00000339355 763 ntAPPRIS P1 BASIC17■□□□□ 0.31
RTN4IP1Q8WWV3 CPED1-202ENST00000340646 1056 ntTSL 5 BASIC17■□□□□ 0.31
RTN4IP1Q8WWV3 ZNF12-201ENST00000342651 2921 ntAPPRIS ALT2 TSL 2 BASIC17■□□□□ 0.31
RTN4IP1Q8WWV3 PYY-201ENST00000360085 1053 ntAPPRIS P2 TSL 1 (best) BASIC17■□□□□ 0.31
RTN4IP1Q8WWV3 SLC35A2-205ENST00000376529 865 ntTSL 3 BASIC17■□□□□ 0.31
RTN4IP1Q8WWV3 TSPAN4-206ENST00000397408 1430 ntAPPRIS P1 TSL 2 BASIC17■□□□□ 0.31
RTN4IP1Q8WWV3 NDUFB2-207ENST00000465506 1101 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
RTN4IP1Q8WWV3 IMPDH1-208ENST00000470772 1888 ntAPPRIS ALT1 TSL 5 BASIC17■□□□□ 0.31
RTN4IP1Q8WWV3 ADAP1-216ENST00000539900 2178 ntTSL 2 BASIC17■□□□□ 0.31
RTN4IP1Q8WWV3 SMG8-203ENST00000578922 2178 ntBASIC17■□□□□ 0.31
RTN4IP1Q8WWV3 AC008105.3-201ENST00000586376 844 ntTSL 3 BASIC17■□□□□ 0.31
RTN4IP1Q8WWV3 HSD17B14-204ENST00000599157 991 ntTSL 3 BASIC17■□□□□ 0.31
RTN4IP1Q8WWV3 STMN3-201ENST00000370053 2255 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
RTN4IP1Q8WWV3 AHCYL1-203ENST00000393614 4313 ntTSL 2 BASIC17■□□□□ 0.31
RTN4IP1Q8WWV3 CERS4-208ENST00000559336 1515 ntTSL 1 (best) BASIC17■□□□□ 0.31
RTN4IP1Q8WWV3 ARRDC2-201ENST00000222250 2503 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
RTN4IP1Q8WWV3 ST3GAL4-217ENST00000534083 1919 ntAPPRIS ALT1 TSL 5 BASIC17■□□□□ 0.31
RTN4IP1Q8WWV3 SMARCD2-212ENST00000613943 2342 ntTSL 5 BASIC16.99■□□□□ 0.31
RTN4IP1Q8WWV3 GATA1-202ENST00000376670 1497 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
RTN4IP1Q8WWV3 AC138696.1-201ENST00000522452 2897 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
RTN4IP1Q8WWV3 MME-202ENST00000382989 1319 ntTSL 1 (best) BASIC16.99■□□□□ 0.31
RTN4IP1Q8WWV3 PKMYT1-213ENST00000574385 1892 ntAPPRIS P1 TSL 2 BASIC16.99■□□□□ 0.31
RTN4IP1Q8WWV3 PTOV1-212ENST00000599732 1577 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
RTN4IP1Q8WWV3 DMRT2-205ENST00000382255 2367 ntTSL 1 (best) BASIC16.99■□□□□ 0.31
RTN4IP1Q8WWV3 PRR25-201ENST00000301698 1209 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
RTN4IP1Q8WWV3 RAMP1-203ENST00000404910 857 ntTSL 2 BASIC16.99■□□□□ 0.31
RTN4IP1Q8WWV3 AC093833.1-201ENST00000442821 553 ntTSL 5 BASIC16.99■□□□□ 0.31
RTN4IP1Q8WWV3 ZSWIM7-205ENST00000472495 703 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
RTN4IP1Q8WWV3 AC093627.4-202ENST00000479592 591 ntTSL 4 BASIC16.99■□□□□ 0.31
RTN4IP1Q8WWV3 ATPIF1-204ENST00000497986 599 ntTSL 2 BASIC16.99■□□□□ 0.31
RTN4IP1Q8WWV3 BEX2-204ENST00000536889 1077 ntTSL 2 BASIC16.99■□□□□ 0.31
RTN4IP1Q8WWV3 TESC-206ENST00000541210 936 ntTSL 3 BASIC16.99■□□□□ 0.31
RTN4IP1Q8WWV3 GABARAPL2-205ENST00000568455 646 ntTSL 3 BASIC16.99■□□□□ 0.31
RTN4IP1Q8WWV3 AC104187.1-201ENST00000607510 612 ntBASIC16.99■□□□□ 0.31
RTN4IP1Q8WWV3 AC008175.2-201ENST00000612840 297 ntBASIC16.99■□□□□ 0.31
RTN4IP1Q8WWV3 MIR6821-201ENST00000617625 74 ntBASIC16.99■□□□□ 0.31
RTN4IP1Q8WWV3 AC092720.2-201ENST00000602388 1665 ntBASIC16.99■□□□□ 0.31
RTN4IP1Q8WWV3 BZW1-202ENST00000409226 2455 ntTSL 2 BASIC16.99■□□□□ 0.31
RTN4IP1Q8WWV3 GPR62-201ENST00000322241 2191 ntAPPRIS P1 BASIC16.99■□□□□ 0.31
RTN4IP1Q8WWV3 MAPK8IP1-201ENST00000241014 3050 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
RTN4IP1Q8WWV3 LSM11-201ENST00000286307 6584 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
RTN4IP1Q8WWV3 H2AFX-202ENST00000530167 1614 ntAPPRIS P1 BASIC16.99■□□□□ 0.31
RTN4IP1Q8WWV3 SOCS2-206ENST00000549122 2391 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
RTN4IP1Q8WWV3 HLA-G-204ENST00000376828 1490 ntAPPRIS ALT2 BASIC16.99■□□□□ 0.31
RTN4IP1Q8WWV3 PAIP1-203ENST00000436644 1734 ntAPPRIS ALT1 TSL 1 (best) BASIC16.99■□□□□ 0.31
RTN4IP1Q8WWV3 RIPPLY3-201ENST00000329553 2235 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
RTN4IP1Q8WWV3 SMPD3-201ENST00000219334 5453 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
RTN4IP1Q8WWV3 BRSK1-201ENST00000309383 3079 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
RTN4IP1Q8WWV3 ISYNA1-201ENST00000338128 2420 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
RTN4IP1Q8WWV3 TBL1Y-203ENST00000383032 2407 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
RTN4IP1Q8WWV3 LMLN-204ENST00000420910 2423 ntAPPRIS P2 TSL 1 (best) BASIC16.98■□□□□ 0.31
RTN4IP1Q8WWV3 B4GALT2-204ENST00000434555 1923 ntTSL 1 (best) BASIC16.98■□□□□ 0.31
RTN4IP1Q8WWV3 MMP28-201ENST00000605424 1928 ntAPPRIS P3 TSL 1 (best) BASIC16.98■□□□□ 0.31
RTN4IP1Q8WWV3 COL13A1-201ENST00000354547 3027 ntAPPRIS ALT2 TSL 5 BASIC16.98■□□□□ 0.31
RTN4IP1Q8WWV3 PTPA-204ENST00000355007 2515 ntTSL 5 BASIC16.98■□□□□ 0.31
RTN4IP1Q8WWV3 PI4KB-213ENST00000529142 2603 ntTSL 2 BASIC16.98■□□□□ 0.31
RTN4IP1Q8WWV3 SDHA-201ENST00000264932 2390 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
RTN4IP1Q8WWV3 LARP6-202ENST00000344870 527 ntTSL 1 (best) BASIC16.98■□□□□ 0.31
RTN4IP1Q8WWV3 POU5F1P4-201ENST00000413175 1085 ntBASIC16.98■□□□□ 0.31
RTN4IP1Q8WWV3 BRD2-214ENST00000496118 735 ntTSL 1 (best) BASIC16.98■□□□□ 0.31
RTN4IP1Q8WWV3 DUX4L2-201ENST00000561772 1275 ntBASIC16.98■□□□□ 0.31
RTN4IP1Q8WWV3 DUX4-206ENST00000616166 1275 ntAPPRIS P2 BASIC16.98■□□□□ 0.31
RTN4IP1Q8WWV3 DUX4L6-201ENST00000626483 1275 ntBASIC16.98■□□□□ 0.31
RTN4IP1Q8WWV3 DUX4L1-201ENST00000627662 1275 ntBASIC16.98■□□□□ 0.31
RTN4IP1Q8WWV3 DUX4L8-201ENST00000629013 1275 ntBASIC16.98■□□□□ 0.31
RTN4IP1Q8WWV3 DUX4L3-201ENST00000630187 1275 ntBASIC16.98■□□□□ 0.31
RTN4IP1Q8WWV3 DUX4L7-201ENST00000630678 1275 ntBASIC16.98■□□□□ 0.31
RTN4IP1Q8WWV3 DUX4L5-201ENST00000630834 1275 ntBASIC16.98■□□□□ 0.31
RTN4IP1Q8WWV3 AP001160.5-201ENST00000636508 485 ntAPPRIS P1 BASIC16.98■□□□□ 0.31
RTN4IP1Q8WWV3 COL13A1-205ENST00000398978 3093 ntAPPRIS P4 TSL 5 BASIC16.98■□□□□ 0.31
RTN4IP1Q8WWV3 ZNF281-202ENST00000367352 2933 ntAPPRIS ALT2 TSL 2 BASIC16.98■□□□□ 0.31
RTN4IP1Q8WWV3 HOXC13-201ENST00000243056 2423 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
RTN4IP1Q8WWV3 ST3GAL4-204ENST00000444328 1812 ntAPPRIS ALT1 TSL 5 BASIC16.98■□□□□ 0.31
RTN4IP1Q8WWV3 TCF3P1-201ENST00000423021 1937 ntBASIC16.98■□□□□ 0.31
RTN4IP1Q8WWV3 AC061975.6-201ENST00000579045 1553 ntBASIC16.98■□□□□ 0.31
RTN4IP1Q8WWV3 SBNO2-201ENST00000361757 4923 ntAPPRIS P4 TSL 1 (best) BASIC16.98■□□□□ 0.31
RTN4IP1Q8WWV3 ZNF324B-202ENST00000545523 2368 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
RTN4IP1Q8WWV3 NGLY1-202ENST00000280700 2473 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
RTN4IP1Q8WWV3 TCIRG1-213ENST00000532635 2457 ntTSL 1 (best) BASIC16.97■□□□□ 0.31
RTN4IP1Q8WWV3 AC004854.2-201ENST00000608450 1441 ntBASIC16.97■□□□□ 0.31
RTN4IP1Q8WWV3 TOR1B-201ENST00000259339 2769 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
RTN4IP1Q8WWV3 DPF1-203ENST00000414789 1960 ntTSL 2 BASIC16.97■□□□□ 0.31
RTN4IP1Q8WWV3 ZNF852-201ENST00000436261 1968 ntAPPRIS P1 TSL 2 BASIC16.97■□□□□ 0.31
RTN4IP1Q8WWV3 NAA20-203ENST00000398602 1604 ntTSL 5 BASIC16.97■□□□□ 0.31
RTN4IP1Q8WWV3 NKX6-1-201ENST00000295886 2628 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
RTN4IP1Q8WWV3 UCN-201ENST00000296099 795 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
RTN4IP1Q8WWV3 EFCAB6-202ENST00000356087 1129 ntTSL 5 BASIC16.97■□□□□ 0.31
RTN4IP1Q8WWV3 BHLHA9-201ENST00000391429 902 ntAPPRIS P1 BASIC16.97■□□□□ 0.31
RTN4IP1Q8WWV3 AC034268.1-201ENST00000441047 882 ntBASIC16.97■□□□□ 0.31
RTN4IP1Q8WWV3 AC010141.2-201ENST00000452426 721 ntBASIC16.97■□□□□ 0.31
RTN4IP1Q8WWV3 PLD4-205ENST00000553861 667 ntTSL 2 BASIC16.97■□□□□ 0.31
RTN4IP1Q8WWV3 TRAPPC2L-213ENST00000567895 854 ntTSL 3 BASIC16.97■□□□□ 0.31
RTN4IP1Q8WWV3 AC110285.4-201ENST00000572590 424 ntTSL 3 BASIC16.97■□□□□ 0.31
Retrieved 100 of 98,524 protein–RNA pairs in 19.5 ms