Protein–RNA interactions for Protein: Q8WVD3

RNF138, E3 ubiquitin-protein ligase RNF138, humanhuman

Predictions only

Length 245 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF138Q8WVD3 THAP7-201ENST00000215742 1213 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
RNF138Q8WVD3 DYNLRB1-203ENST00000374846 1044 ntTSL 5 BASIC18.39■□□□□ 0.53
RNF138Q8WVD3 UNC93B5-201ENST00000530315 699 ntBASIC18.39■□□□□ 0.53
RNF138Q8WVD3 CFL1-211ENST00000531407 1062 ntTSL 2 BASIC18.39■□□□□ 0.53
RNF138Q8WVD3 ZNF688-205ENST00000563707 244 ntTSL 3 BASIC18.39■□□□□ 0.53
RNF138Q8WVD3 RASSF7-204ENST00000431809 1745 ntAPPRIS ALT2 TSL 5 BASIC18.39■□□□□ 0.53
RNF138Q8WVD3 MYCN-201ENST00000281043 2602 ntAPPRIS P1 TSL 5 BASIC18.39■□□□□ 0.53
RNF138Q8WVD3 TOM1L2-210ENST00000542206 1320 ntTSL 2 BASIC18.39■□□□□ 0.53
RNF138Q8WVD3 PRAF2-202ENST00000553851 1334 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
RNF138Q8WVD3 RBM42-204ENST00000589559 1328 ntTSL 5 BASIC18.39■□□□□ 0.53
RNF138Q8WVD3 AC083805.3-201ENST00000619560 1315 ntTSL 3 BASIC18.39■□□□□ 0.53
RNF138Q8WVD3 RAPGEF1-203ENST00000372195 6256 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
RNF138Q8WVD3 WASH6P-203ENST00000460206 1826 ntTSL 5 BASIC18.39■□□□□ 0.53
RNF138Q8WVD3 AP000662.2-202ENST00000530595 2790 ntTSL 2 BASIC18.39■□□□□ 0.53
RNF138Q8WVD3 NUTF2-201ENST00000219169 2321 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
RNF138Q8WVD3 KCNS3-201ENST00000304101 2333 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
RNF138Q8WVD3 ABHD1-201ENST00000316470 1400 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
RNF138Q8WVD3 DBNL-207ENST00000440166 1415 ntTSL 2 BASIC18.39■□□□□ 0.53
RNF138Q8WVD3 ODC1-202ENST00000405333 1943 ntAPPRIS P1 TSL 2 BASIC18.39■□□□□ 0.53
RNF138Q8WVD3 CAMKMT-201ENST00000378494 1495 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
RNF138Q8WVD3 BZW1-209ENST00000452790 1473 ntTSL 2 BASIC18.39■□□□□ 0.53
RNF138Q8WVD3 TOR2A-203ENST00000373284 1523 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
RNF138Q8WVD3 CYP1B1-207ENST00000614273 2174 ntAPPRIS P1 TSL 5 BASIC18.38■□□□□ 0.53
RNF138Q8WVD3 ME3-202ENST00000393324 2240 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
RNF138Q8WVD3 KCNK17-201ENST00000373231 1658 ntAPPRIS P3 TSL 1 (best) BASIC18.38■□□□□ 0.53
RNF138Q8WVD3 WIPF1-205ENST00000409415 1772 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
RNF138Q8WVD3 RHNO1-204ENST00000489288 1870 ntAPPRIS P3 TSL 1 (best) BASIC18.38■□□□□ 0.53
RNF138Q8WVD3 MEA1-201ENST00000244711 1089 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
RNF138Q8WVD3 ARL2-201ENST00000246747 979 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
RNF138Q8WVD3 AC114730.2-201ENST00000417267 668 ntTSL 3 BASIC18.38■□□□□ 0.53
RNF138Q8WVD3 AL807752.2-201ENST00000435463 301 ntTSL 3 BASIC18.38■□□□□ 0.53
RNF138Q8WVD3 AL031963.3-201ENST00000606441 850 ntBASIC18.38■□□□□ 0.53
RNF138Q8WVD3 PTCRA-204ENST00000616441 1125 ntAPPRIS ALT2 TSL 2 BASIC18.38■□□□□ 0.53
RNF138Q8WVD3 CACNB2-203ENST00000352115 1911 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
RNF138Q8WVD3 ANKRD2-201ENST00000298808 1350 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
RNF138Q8WVD3 GLG1-214ENST00000627032 2147 ntTSL 5 BASIC18.38■□□□□ 0.53
RNF138Q8WVD3 ZNF707-201ENST00000358656 2183 ntAPPRIS P1 TSL 2 BASIC18.38■□□□□ 0.53
RNF138Q8WVD3 CLDND1-202ENST00000394180 2228 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
RNF138Q8WVD3 PILRB-207ENST00000448382 2314 ntTSL 2 BASIC18.38■□□□□ 0.53
RNF138Q8WVD3 ETV2-202ENST00000379026 1571 ntAPPRIS ALT2 TSL 2 BASIC18.38■□□□□ 0.53
RNF138Q8WVD3 TRIB3-201ENST00000217233 2499 ntAPPRIS P3 TSL 1 (best) BASIC18.38■□□□□ 0.53
RNF138Q8WVD3 CKLF-201ENST00000264001 669 ntAPPRIS P4 TSL 1 (best) BASIC18.37■□□□□ 0.53
RNF138Q8WVD3 SDHC-201ENST00000342751 1127 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
RNF138Q8WVD3 NUDT8-202ENST00000376693 728 ntAPPRIS ALT2 TSL 2 BASIC18.37■□□□□ 0.53
RNF138Q8WVD3 MCHR1-202ENST00000381433 1219 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
RNF138Q8WVD3 AC114730.1-201ENST00000400768 472 ntTSL 4 BASIC18.37■□□□□ 0.53
RNF138Q8WVD3 GGT1-206ENST00000404223 952 ntTSL 2 BASIC18.37■□□□□ 0.53
RNF138Q8WVD3 NAT14-204ENST00000591590 1011 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
RNF138Q8WVD3 GGTLC2-204ENST00000613850 973 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
RNF138Q8WVD3 GGTLC2-205ENST00000618722 1047 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
RNF138Q8WVD3 MRGPRE-201ENST00000389832 1409 ntAPPRIS P1 TSL 2 BASIC18.37■□□□□ 0.53
RNF138Q8WVD3 CIZ1-203ENST00000357558 2907 ntAPPRIS ALT2 TSL 5 BASIC18.37■□□□□ 0.53
RNF138Q8WVD3 AC092368.3-202ENST00000574180 1591 ntBASIC18.37■□□□□ 0.53
RNF138Q8WVD3 GSEC-202ENST00000629441 1572 ntTSL 2 BASIC18.37■□□□□ 0.53
RNF138Q8WVD3 ACBD4-201ENST00000321854 1806 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
RNF138Q8WVD3 GLIPR2-203ENST00000396613 1917 ntTSL 4 BASIC18.37■□□□□ 0.53
RNF138Q8WVD3 TMEM161A-202ENST00000450333 1930 ntTSL 2 BASIC18.37■□□□□ 0.53
RNF138Q8WVD3 TCP11-202ENST00000311875 2166 ntAPPRIS ALT2 TSL 1 (best) BASIC18.37■□□□□ 0.53
RNF138Q8WVD3 NDRG2-242ENST00000555158 2216 ntAPPRIS ALT1 TSL 1 (best) BASIC18.37■□□□□ 0.53
RNF138Q8WVD3 ANO1-202ENST00000355303 4790 ntAPPRIS P2 TSL 1 (best) BASIC18.37■□□□□ 0.53
RNF138Q8WVD3 MGAT4B-201ENST00000292591 2446 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
RNF138Q8WVD3 PABPC4-204ENST00000372862 2470 ntTSL 5 BASIC18.37■□□□□ 0.53
RNF138Q8WVD3 QTRT1-201ENST00000250237 1317 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
RNF138Q8WVD3 BID-202ENST00000342111 854 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
RNF138Q8WVD3 HAUS4-202ENST00000342454 1474 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
RNF138Q8WVD3 ZDHHC16-202ENST00000352634 1718 ntAPPRIS ALT1 TSL 1 (best) BASIC18.36■□□□□ 0.53
RNF138Q8WVD3 TEX45-201ENST00000361664 1679 ntAPPRIS P2 TSL 1 (best) BASIC18.36■□□□□ 0.53
RNF138Q8WVD3 FAM213A-202ENST00000372185 1723 ntTSL 2 BASIC18.36■□□□□ 0.53
RNF138Q8WVD3 IPO13-201ENST00000372339 1201 ntTSL 2 BASIC18.36■□□□□ 0.53
RNF138Q8WVD3 CD247-202ENST00000392122 1678 ntAPPRIS ALT1 TSL 1 (best) BASIC18.36■□□□□ 0.53
RNF138Q8WVD3 GAS7-202ENST00000396115 929 ntTSL 5 BASIC18.36■□□□□ 0.53
RNF138Q8WVD3 C17orf67-201ENST00000397861 2013 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
RNF138Q8WVD3 TSEN15-203ENST00000423085 1743 ntTSL 2 BASIC18.36■□□□□ 0.53
RNF138Q8WVD3 C5orf38-206ENST00000505778 509 ntAPPRIS ALT2 TSL 1 (best) BASIC18.36■□□□□ 0.53
RNF138Q8WVD3 SMIM20-201ENST00000506197 935 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
RNF138Q8WVD3 CAMLG-202ENST00000514518 895 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
RNF138Q8WVD3 TPCN2-205ENST00000542467 2000 ntTSL 2 BASIC18.36■□□□□ 0.53
RNF138Q8WVD3 IGFBP6-203ENST00000548547 1177 ntAPPRIS ALT2 TSL 5 BASIC18.36■□□□□ 0.53
RNF138Q8WVD3 SUPT4H1-202ENST00000577396 1643 ntTSL 2 BASIC18.36■□□□□ 0.53
RNF138Q8WVD3 KLF2-202ENST00000592003 564 ntTSL 3 BASIC18.36■□□□□ 0.53
RNF138Q8WVD3 FFAR3-202ENST00000594310 1182 ntAPPRIS P1 BASIC18.36■□□□□ 0.53
RNF138Q8WVD3 NYAP1-202ENST00000454988 2777 ntTSL 5 BASIC18.36■□□□□ 0.53
RNF138Q8WVD3 RELA-201ENST00000308639 2681 ntAPPRIS ALT1 TSL 1 (best) BASIC18.36■□□□□ 0.53
RNF138Q8WVD3 ITGBL1-206ENST00000618057 2368 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
RNF138Q8WVD3 ZNF331-202ENST00000411977 2248 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
RNF138Q8WVD3 IMPDH1-208ENST00000470772 1888 ntAPPRIS ALT1 TSL 5 BASIC18.35■□□□□ 0.53
RNF138Q8WVD3 NXN-201ENST00000336868 3036 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
RNF138Q8WVD3 DBNDD2-206ENST00000372720 1481 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
RNF138Q8WVD3 EPN2-212ENST00000575595 1491 ntTSL 2 BASIC18.35■□□□□ 0.53
RNF138Q8WVD3 FAM170B-201ENST00000311787 1401 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
RNF138Q8WVD3 KRT8P17-201ENST00000453110 1448 ntBASIC18.35■□□□□ 0.53
RNF138Q8WVD3 EGFL7-202ENST00000371698 1282 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
RNF138Q8WVD3 DNTTIP1-201ENST00000372622 1290 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
RNF138Q8WVD3 METTL21A-207ENST00000442521 1003 ntAPPRIS P1 TSL 2 BASIC18.35■□□□□ 0.53
RNF138Q8WVD3 ZNF467-202ENST00000484747 913 ntTSL 2 BASIC18.35■□□□□ 0.53
RNF138Q8WVD3 CD99P1-205ENST00000527459 561 ntBASIC18.35■□□□□ 0.53
RNF138Q8WVD3 TPD52L1-207ENST00000527711 999 ntTSL 2 BASIC18.35■□□□□ 0.53
RNF138Q8WVD3 AC034102.6-201ENST00000550947 559 ntTSL 4 BASIC18.35■□□□□ 0.53
RNF138Q8WVD3 AC010646.1-201ENST00000594059 515 ntAPPRIS P1 TSL 4 BASIC18.35■□□□□ 0.53
RNF138Q8WVD3 EPB41L4B-202ENST00000374566 5800 ntAPPRIS P4 TSL 1 (best) BASIC18.35■□□□□ 0.53
Retrieved 100 of 98,524 protein–RNA pairs in 24.9 ms