Protein–RNA interactions for Protein: Q8N8U3

RTL3, Retrotransposon Gag-like protein 3, humanhuman

Known RBP Predictions only

Length 475 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RTL3Q8N8U3 ESYT2-201ENST00000251527 5960 ntAPPRIS P2 TSL 1 (best) BASIC20.81■□□□□ 0.92
RTL3Q8N8U3 ARSB-201ENST00000264914 5327 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
RTL3Q8N8U3 ETV7-203ENST00000373737 1488 ntAPPRIS ALT2 TSL 1 (best) BASIC20.81■□□□□ 0.92
RTL3Q8N8U3 FGFR2-211ENST00000369059 3003 ntTSL 5 BASIC20.8■□□□□ 0.92
RTL3Q8N8U3 MGAT1-204ENST00000427865 1919 ntAPPRIS P1 TSL 2 BASIC20.8■□□□□ 0.92
RTL3Q8N8U3 ADRA1B-201ENST00000306675 2047 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
RTL3Q8N8U3 CTCF-202ENST00000401394 2978 ntTSL 1 (best) BASIC20.8■□□□□ 0.92
RTL3Q8N8U3 MAG-202ENST00000392213 2390 ntAPPRIS P4 TSL 1 (best) BASIC20.8■□□□□ 0.92
RTL3Q8N8U3 PHACTR2-203ENST00000367584 2490 ntAPPRIS ALT2 TSL 5 BASIC20.8■□□□□ 0.92
RTL3Q8N8U3 TMEM218-201ENST00000279968 1034 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
RTL3Q8N8U3 MPV17L-202ENST00000396385 1037 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
RTL3Q8N8U3 AL391244.2-201ENST00000428932 543 ntTSL 2 BASIC20.8■□□□□ 0.92
RTL3Q8N8U3 CTBP1-AS2-203ENST00000507044 739 ntTSL 3 BASIC20.8■□□□□ 0.92
RTL3Q8N8U3 LINC01956-201ENST00000557729 695 ntTSL 5 BASIC20.8■□□□□ 0.92
RTL3Q8N8U3 AC138028.5-201ENST00000566114 558 ntTSL 5 BASIC20.8■□□□□ 0.92
RTL3Q8N8U3 AC133041.1-202ENST00000642053 222 ntBASIC20.8■□□□□ 0.92
RTL3Q8N8U3 TCP11-202ENST00000311875 2166 ntAPPRIS ALT2 TSL 1 (best) BASIC20.8■□□□□ 0.92
RTL3Q8N8U3 ST3GAL4-204ENST00000444328 1812 ntAPPRIS ALT1 TSL 5 BASIC20.8■□□□□ 0.92
RTL3Q8N8U3 HNRNPUL2-201ENST00000301785 5106 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
RTL3Q8N8U3 FUZ-212ENST00000528094 1479 ntTSL 2 BASIC20.8■□□□□ 0.92
RTL3Q8N8U3 ARFRP1-214ENST00000622789 2559 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
RTL3Q8N8U3 VRK2-207ENST00000440705 1676 ntAPPRIS ALT2 TSL 1 (best) BASIC20.8■□□□□ 0.92
RTL3Q8N8U3 GABARAPL3-202ENST00000624044 1851 ntBASIC20.79■□□□□ 0.92
RTL3Q8N8U3 STIM2-204ENST00000467087 5154 ntAPPRIS ALT2 TSL 1 (best) BASIC20.79■□□□□ 0.92
RTL3Q8N8U3 CYP1B1-207ENST00000614273 2174 ntAPPRIS P1 TSL 5 BASIC20.79■□□□□ 0.92
RTL3Q8N8U3 MFSD10-206ENST00000508221 1639 ntTSL 5 BASIC20.79■□□□□ 0.92
RTL3Q8N8U3 ATF5-202ENST00000595125 1637 ntAPPRIS P1 TSL 2 BASIC20.79■□□□□ 0.92
RTL3Q8N8U3 ENTPD6-203ENST00000376652 2750 ntAPPRIS P3 TSL 1 (best) BASIC20.79■□□□□ 0.92
RTL3Q8N8U3 FBLN5-202ENST00000342058 2123 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
RTL3Q8N8U3 LINC01637-201ENST00000444039 684 ntTSL 2 BASIC20.79■□□□□ 0.92
RTL3Q8N8U3 RHEB-204ENST00000472642 900 ntTSL 3 BASIC20.79■□□□□ 0.92
RTL3Q8N8U3 RRAS2-203ENST00000526063 970 ntTSL 1 (best) BASIC20.79■□□□□ 0.92
RTL3Q8N8U3 BET1L-207ENST00000529614 560 ntTSL 5 BASIC20.79■□□□□ 0.92
RTL3Q8N8U3 RRAS2-208ENST00000532814 982 ntTSL 1 (best) BASIC20.79■□□□□ 0.92
RTL3Q8N8U3 BRWD1-AS2-201ENST00000603064 1028 ntBASIC20.79■□□□□ 0.92
RTL3Q8N8U3 OBSL1-214ENST00000603926 5520 ntTSL 5 BASIC20.79■□□□□ 0.92
RTL3Q8N8U3 PTMS-207ENST00000619580 1150 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
RTL3Q8N8U3 MYC-209ENST00000641252 345 ntBASIC20.79■□□□□ 0.92
RTL3Q8N8U3 PILRB-207ENST00000448382 2314 ntTSL 2 BASIC20.79■□□□□ 0.92
RTL3Q8N8U3 ICAM5-201ENST00000221980 3000 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
RTL3Q8N8U3 SLC16A3-201ENST00000392339 2074 ntAPPRIS P1 TSL 5 BASIC20.79■□□□□ 0.92
RTL3Q8N8U3 SLC16A3-202ENST00000392341 2086 ntAPPRIS P1 TSL 5 BASIC20.79■□□□□ 0.92
RTL3Q8N8U3 AL157384.1-201ENST00000445995 2473 ntBASIC20.79■□□□□ 0.92
RTL3Q8N8U3 KLHDC1-201ENST00000359332 2691 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
RTL3Q8N8U3 FN3K-201ENST00000300784 1434 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
RTL3Q8N8U3 CHRNA3-202ENST00000348639 2030 ntTSL 1 (best) BASIC20.78■□□□□ 0.92
RTL3Q8N8U3 KMT2B-201ENST00000420124 8469 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
RTL3Q8N8U3 SLC1A5-203ENST00000542575 2882 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
RTL3Q8N8U3 ABLIM2-205ENST00000428004 2573 ntTSL 1 (best) BASIC20.78■□□□□ 0.92
RTL3Q8N8U3 ZNF497-202ENST00000425453 2261 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
RTL3Q8N8U3 ARSE-205ENST00000540563 1990 ntTSL 2 BASIC20.78■□□□□ 0.92
RTL3Q8N8U3 NOXO1-203ENST00000397280 1147 ntAPPRIS ALT2 TSL 1 (best) BASIC20.78■□□□□ 0.92
RTL3Q8N8U3 MAGI2-AS3-209ENST00000448195 774 ntTSL 3 BASIC20.78■□□□□ 0.92
RTL3Q8N8U3 NME6-213ENST00000451657 871 ntTSL 2 BASIC20.78■□□□□ 0.92
RTL3Q8N8U3 AC099522.1-201ENST00000505955 881 ntTSL 3 BASIC20.78■□□□□ 0.92
RTL3Q8N8U3 NISCH-201ENST00000345716 5238 ntAPPRIS P3 TSL 1 (best) BASIC20.78■□□□□ 0.92
RTL3Q8N8U3 C17orf67-201ENST00000397861 2013 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
RTL3Q8N8U3 ARHGDIA-201ENST00000269321 1906 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
RTL3Q8N8U3 SNUPN-205ENST00000564644 1931 ntAPPRIS P1 TSL 2 BASIC20.78■□□□□ 0.92
RTL3Q8N8U3 CDK5R2-201ENST00000302625 2508 ntAPPRIS P1 BASIC20.77■□□□□ 0.92
RTL3Q8N8U3 MAP2K5-203ENST00000354498 1783 ntTSL 2 BASIC20.77■□□□□ 0.92
RTL3Q8N8U3 ISYNA1-201ENST00000338128 2420 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
RTL3Q8N8U3 TACC3-213ENST00000617535 1693 ntTSL 5 BASIC20.77■□□□□ 0.92
RTL3Q8N8U3 AL606970.3-201ENST00000446811 2246 ntTSL 2 BASIC20.77■□□□□ 0.92
RTL3Q8N8U3 SETD6-201ENST00000219315 1553 ntAPPRIS ALT2 TSL 1 (best) BASIC20.77■□□□□ 0.92
RTL3Q8N8U3 FOXI1-202ENST00000449804 2011 ntTSL 1 (best) BASIC20.77■□□□□ 0.92
RTL3Q8N8U3 TTLL7-214ENST00000610996 2028 ntTSL 5 BASIC20.77■□□□□ 0.92
RTL3Q8N8U3 TMEM161A-202ENST00000450333 1930 ntTSL 2 BASIC20.77■□□□□ 0.92
RTL3Q8N8U3 TMEM243-201ENST00000257637 1063 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
RTL3Q8N8U3 UBE2C-203ENST00000352551 665 ntTSL 2 BASIC20.77■□□□□ 0.92
RTL3Q8N8U3 AL359182.2-201ENST00000457720 606 ntTSL 3 BASIC20.77■□□□□ 0.92
RTL3Q8N8U3 DIMT1-202ENST00000506390 1208 ntTSL 1 (best) BASIC20.77■□□□□ 0.92
RTL3Q8N8U3 PADI2-201ENST00000375481 1607 ntTSL 1 (best) BASIC20.77■□□□□ 0.92
RTL3Q8N8U3 KIAA0895-204ENST00000415803 2865 ntTSL 1 (best) BASIC20.77■□□□□ 0.92
RTL3Q8N8U3 CERKL-205ENST00000409440 2425 ntTSL 2 BASIC20.77■□□□□ 0.92
RTL3Q8N8U3 SPON2-201ENST00000290902 1869 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
RTL3Q8N8U3 DYRK3-202ENST00000367108 2218 ntTSL 1 (best) BASIC20.77■□□□□ 0.91
RTL3Q8N8U3 RHBDD3-201ENST00000216085 1794 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.91
RTL3Q8N8U3 SNAP23-202ENST00000349777 2480 ntTSL 2 BASIC20.77■□□□□ 0.91
RTL3Q8N8U3 MYO1C-203ENST00000438665 4898 ntAPPRIS ALT1 TSL 5 BASIC20.76■□□□□ 0.91
RTL3Q8N8U3 TNFRSF14-201ENST00000355716 1707 ntAPPRIS P2 TSL 1 (best) BASIC20.76■□□□□ 0.91
RTL3Q8N8U3 DET1-207ENST00000564406 2315 ntTSL 2 BASIC20.76■□□□□ 0.91
RTL3Q8N8U3 PRKCD-202ENST00000394729 2810 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
RTL3Q8N8U3 RIPPLY3-201ENST00000329553 2235 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
RTL3Q8N8U3 PABPC4-204ENST00000372862 2470 ntTSL 5 BASIC20.76■□□□□ 0.91
RTL3Q8N8U3 RHNO1-204ENST00000489288 1870 ntAPPRIS P3 TSL 1 (best) BASIC20.76■□□□□ 0.91
RTL3Q8N8U3 CUEDC2-201ENST00000369937 1191 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
RTL3Q8N8U3 RAMP1-202ENST00000403885 650 ntTSL 3 BASIC20.76■□□□□ 0.91
RTL3Q8N8U3 AC097658.1-201ENST00000475555 843 ntBASIC20.76■□□□□ 0.91
RTL3Q8N8U3 AC006252.1-201ENST00000483834 1101 ntTSL 1 (best) BASIC20.76■□□□□ 0.91
RTL3Q8N8U3 AC073896.1-201ENST00000549318 937 ntAPPRIS P1 TSL 5 BASIC20.76■□□□□ 0.91
RTL3Q8N8U3 RGMA-211ENST00000557420 989 ntTSL 3 BASIC20.76■□□□□ 0.91
RTL3Q8N8U3 RPL17-204ENST00000579248 790 ntAPPRIS P1 TSL 2 BASIC20.76■□□□□ 0.91
RTL3Q8N8U3 FNDC11-204ENST00000615526 2954 ntAPPRIS P1 BASIC20.76■□□□□ 0.91
RTL3Q8N8U3 RNH1-202ENST00000356187 1791 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
RTL3Q8N8U3 AGMAT-201ENST00000375826 2500 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
RTL3Q8N8U3 RFXANK-201ENST00000303088 1407 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
RTL3Q8N8U3 EPHA6-202ENST00000470610 2058 ntTSL 2 BASIC20.76■□□□□ 0.91
RTL3Q8N8U3 C12orf42-208ENST00000548883 1336 ntAPPRIS P2 TSL 1 (best) BASIC20.76■□□□□ 0.91
RTL3Q8N8U3 FMR1-204ENST00000370471 4125 ntTSL 5 BASIC20.76■□□□□ 0.91
Retrieved 100 of 98,524 protein–RNA pairs in 23.9 ms