Protein–RNA interactions for Protein: Q86WR0

CCDC25, Coiled-coil domain-containing protein 25, humanhuman

Predictions only

Length 208 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC25Q86WR0 C1QL1-201ENST00000253407 1295 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
CCDC25Q86WR0 AGAP1-IT1-201ENST00000440498 664 ntTSL 3 BASIC20.86■□□□□ 0.93
CCDC25Q86WR0 CHTF8-210ENST00000523421 766 ntTSL 3 BASIC20.86■□□□□ 0.93
CCDC25Q86WR0 FAM174B-207ENST00000555748 866 ntAPPRIS ALT2 TSL 3 BASIC20.86■□□□□ 0.93
CCDC25Q86WR0 AL359317.1-201ENST00000556316 578 ntTSL 4 BASIC20.86■□□□□ 0.93
CCDC25Q86WR0 PRSS33-204ENST00000576886 1755 ntTSL 1 (best) BASIC20.86■□□□□ 0.93
CCDC25Q86WR0 RASSF7-204ENST00000431809 1745 ntAPPRIS ALT2 TSL 5 BASIC20.86■□□□□ 0.93
CCDC25Q86WR0 ST3GAL5-202ENST00000377332 2165 ntTSL 5 BASIC20.86■□□□□ 0.93
CCDC25Q86WR0 BAG4-202ENST00000432471 1943 ntTSL 1 (best) BASIC20.86■□□□□ 0.93
CCDC25Q86WR0 GORAB-201ENST00000367762 1699 ntTSL 1 (best) BASIC20.86■□□□□ 0.93
CCDC25Q86WR0 AGAP5-203ENST00000581191 2779 ntAPPRIS ALT2 TSL 5 BASIC20.85■□□□□ 0.93
CCDC25Q86WR0 PTPA-204ENST00000355007 2515 ntTSL 5 BASIC20.85■□□□□ 0.93
CCDC25Q86WR0 AC120498.9-201ENST00000339021 3867 ntBASIC20.85■□□□□ 0.93
CCDC25Q86WR0 CDKN2C-201ENST00000262662 2904 ntAPPRIS P1 TSL 2 BASIC20.85■□□□□ 0.93
CCDC25Q86WR0 FOXC2-201ENST00000320354 2478 ntAPPRIS P1 BASIC20.85■□□□□ 0.93
CCDC25Q86WR0 AP000547.3-201ENST00000592918 1576 ntTSL 1 (best) BASIC20.85■□□□□ 0.93
CCDC25Q86WR0 ECEL1-201ENST00000304546 2865 ntAPPRIS P3 TSL 1 (best) BASIC20.85■□□□□ 0.93
CCDC25Q86WR0 SHISA4-201ENST00000362011 1341 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
CCDC25Q86WR0 BEAN1-202ENST00000536005 1988 ntTSL 1 (best) BASIC20.85■□□□□ 0.93
CCDC25Q86WR0 BAG5-201ENST00000299204 4848 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
CCDC25Q86WR0 HOXC9-203ENST00000508190 1505 ntAPPRIS P1 TSL 3 BASIC20.85■□□□□ 0.93
CCDC25Q86WR0 PPP5C-202ENST00000391919 1929 ntTSL 5 BASIC20.85■□□□□ 0.93
CCDC25Q86WR0 OSTM1-201ENST00000193322 4467 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
CCDC25Q86WR0 SORCS3-201ENST00000369699 5530 ntAPPRIS P1 TSL 5 BASIC20.85■□□□□ 0.93
CCDC25Q86WR0 POU5F1P4-201ENST00000413175 1085 ntBASIC20.85■□□□□ 0.93
CCDC25Q86WR0 AC096631.2-201ENST00000436136 790 ntBASIC20.85■□□□□ 0.93
CCDC25Q86WR0 AP001330.3-201ENST00000520123 633 ntBASIC20.85■□□□□ 0.93
CCDC25Q86WR0 AC010203.1-202ENST00000550096 695 ntTSL 3 BASIC20.85■□□□□ 0.93
CCDC25Q86WR0 NRL-206ENST00000561028 2103 ntAPPRIS P1 TSL 2 BASIC20.85■□□□□ 0.93
CCDC25Q86WR0 RARRES2P11-201ENST00000635158 484 ntBASIC20.85■□□□□ 0.93
CCDC25Q86WR0 FAM76B-204ENST00000536839 2546 ntAPPRIS ALT1 TSL 5 BASIC20.85■□□□□ 0.93
CCDC25Q86WR0 GNAI1-201ENST00000351004 3347 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
CCDC25Q86WR0 KCNN2-207ENST00000610748 2091 ntTSL 3 BASIC20.85■□□□□ 0.93
CCDC25Q86WR0 KRT1-201ENST00000252244 2451 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
CCDC25Q86WR0 IGFLR1-201ENST00000246532 1645 ntAPPRIS P2 TSL 1 (best) BASIC20.85■□□□□ 0.93
CCDC25Q86WR0 GPR35-202ENST00000403859 2032 ntAPPRIS P3 TSL 2 BASIC20.85■□□□□ 0.93
CCDC25Q86WR0 SCARB1-201ENST00000261693 2611 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
CCDC25Q86WR0 WWC3-201ENST00000380861 6647 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
CCDC25Q86WR0 KIF16B-206ENST00000636835 5109 ntAPPRIS ALT2 TSL 1 (best) BASIC20.85■□□□□ 0.93
CCDC25Q86WR0 AC093627.4-201ENST00000484550 5008 ntTSL 2 BASIC20.84■□□□□ 0.93
CCDC25Q86WR0 FAM91A1-201ENST00000334705 5511 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
CCDC25Q86WR0 TRAPPC12-202ENST00000382110 2483 ntAPPRIS P2 TSL 2 BASIC20.84■□□□□ 0.93
CCDC25Q86WR0 RNF135-205ENST00000535306 2098 ntTSL 1 (best) BASIC20.84■□□□□ 0.93
CCDC25Q86WR0 PLEKHH3-204ENST00000591022 2983 ntAPPRIS P2 TSL 1 (best) BASIC20.84■□□□□ 0.93
CCDC25Q86WR0 CXXC4-201ENST00000394767 5565 ntAPPRIS P1 TSL 5 BASIC20.84■□□□□ 0.93
CCDC25Q86WR0 ENPP7-201ENST00000328313 2043 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
CCDC25Q86WR0 ACTR5-201ENST00000243903 2565 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
CCDC25Q86WR0 NETO1-207ENST00000583169 2357 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
CCDC25Q86WR0 EIF6-201ENST00000374436 1252 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
CCDC25Q86WR0 ATP6V0E2-203ENST00000456496 2722 ntTSL 1 (best) BASIC20.84■□□□□ 0.93
CCDC25Q86WR0 ATP6V0E2-213ENST00000615196 2727 ntTSL 1 (best) BASIC20.84■□□□□ 0.93
CCDC25Q86WR0 GPR162-203ENST00000428545 1610 ntTSL 1 (best) BASIC20.84■□□□□ 0.93
CCDC25Q86WR0 FOXD2-201ENST00000334793 4675 ntAPPRIS P1 BASIC20.84■□□□□ 0.93
CCDC25Q86WR0 VCPKMT-202ENST00000395860 1761 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
CCDC25Q86WR0 LINC00605-201ENST00000514902 1558 ntTSL 1 (best) BASIC20.84■□□□□ 0.93
CCDC25Q86WR0 TRPV3-209ENST00000576742 2766 ntAPPRIS P3 TSL 1 (best) BASIC20.84■□□□□ 0.93
CCDC25Q86WR0 NHLRC1-201ENST00000340650 2248 ntAPPRIS P1 BASIC20.84■□□□□ 0.93
CCDC25Q86WR0 ZC3H12D-201ENST00000409806 5791 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.93
CCDC25Q86WR0 SNAP91-211ENST00000520213 2168 ntTSL 1 (best) BASIC20.83■□□□□ 0.93
CCDC25Q86WR0 AC125437.2-201ENST00000625180 2167 ntBASIC20.83■□□□□ 0.93
CCDC25Q86WR0 GRM5-201ENST00000305432 4475 ntAPPRIS P3 TSL 1 (best) BASIC20.83■□□□□ 0.93
CCDC25Q86WR0 AGO4-201ENST00000373210 7116 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.93
CCDC25Q86WR0 SLC2A8-215ENST00000610552 1763 ntTSL 3 BASIC20.83■□□□□ 0.93
CCDC25Q86WR0 RGMB-207ENST00000513185 2052 ntAPPRIS ALT2 TSL 2 BASIC20.83■□□□□ 0.93
CCDC25Q86WR0 LBX2-AS1-202ENST00000603175 2083 ntBASIC20.83■□□□□ 0.93
CCDC25Q86WR0 ZDHHC16-205ENST00000370846 1280 ntTSL 3 BASIC20.83■□□□□ 0.93
CCDC25Q86WR0 LRRC3C-201ENST00000377924 891 ntAPPRIS P1 TSL 3 BASIC20.83■□□□□ 0.93
CCDC25Q86WR0 VGLL4-208ENST00000424529 1025 ntTSL 1 (best) BASIC20.83■□□□□ 0.93
CCDC25Q86WR0 AC245052.3-201ENST00000450182 901 ntBASIC20.83■□□□□ 0.93
CCDC25Q86WR0 LINC01574-201ENST00000512115 560 ntTSL 2 BASIC20.83■□□□□ 0.93
CCDC25Q86WR0 MSRB1-201ENST00000361871 1423 ntAPPRIS P2 TSL 1 (best) BASIC20.83■□□□□ 0.93
CCDC25Q86WR0 LPAR2-202ENST00000542587 2546 ntAPPRIS P1 TSL 2 BASIC20.83■□□□□ 0.92
CCDC25Q86WR0 SPATA22-210ENST00000573128 1704 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.92
CCDC25Q86WR0 HDDC3-202ENST00000394272 1880 ntAPPRIS P1 TSL 2 BASIC20.83■□□□□ 0.92
CCDC25Q86WR0 CLDND1-201ENST00000341181 2161 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.92
CCDC25Q86WR0 MAFF-202ENST00000407965 2325 ntAPPRIS P1 TSL 2 BASIC20.83■□□□□ 0.92
CCDC25Q86WR0 DMRT2-201ENST00000259622 2459 ntTSL 2 BASIC20.83■□□□□ 0.92
CCDC25Q86WR0 GAS2L1-208ENST00000616432 2925 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.92
CCDC25Q86WR0 SH3BGRL3-201ENST00000270792 1661 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.92
CCDC25Q86WR0 CDH23-212ENST00000616684 4814 ntTSL 5 BASIC20.83■□□□□ 0.92
CCDC25Q86WR0 TMEM259-209ENST00000592590 2509 ntTSL 5 BASIC20.82■□□□□ 0.92
CCDC25Q86WR0 INPP5J-203ENST00000401755 1751 ntTSL 2 BASIC20.82■□□□□ 0.92
CCDC25Q86WR0 EPHX3-202ENST00000435261 1771 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
CCDC25Q86WR0 ASPG-201ENST00000546892 1791 ntAPPRIS ALT2 TSL 1 (best) BASIC20.82■□□□□ 0.92
CCDC25Q86WR0 SPR-201ENST00000234454 1480 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
CCDC25Q86WR0 AC008073.3-201ENST00000610442 2281 ntAPPRIS P1 TSL 2 BASIC20.82■□□□□ 0.92
CCDC25Q86WR0 PRSS12-201ENST00000296498 4809 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
CCDC25Q86WR0 WIPI2-203ENST00000401525 2112 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
CCDC25Q86WR0 CHTF8-208ENST00000522091 863 ntTSL 2 BASIC20.82■□□□□ 0.92
CCDC25Q86WR0 BEX2-204ENST00000536889 1077 ntTSL 2 BASIC20.82■□□□□ 0.92
CCDC25Q86WR0 AC131212.1-201ENST00000613771 668 ntBASIC20.82■□□□□ 0.92
CCDC25Q86WR0 ADAM33-202ENST00000356518 3677 ntAPPRIS P3 TSL 1 (best) BASIC20.82■□□□□ 0.92
CCDC25Q86WR0 INTS11-202ENST00000411962 1832 ntTSL 5 BASIC20.82■□□□□ 0.92
CCDC25Q86WR0 IL17RC-202ENST00000383812 2384 ntAPPRIS ALT2 TSL 1 (best) BASIC20.82■□□□□ 0.92
CCDC25Q86WR0 IL17RC-203ENST00000403601 2388 ntAPPRIS ALT2 TSL 1 (best) BASIC20.82■□□□□ 0.92
CCDC25Q86WR0 ABHD5-205ENST00000458276 1690 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
CCDC25Q86WR0 RTKN-201ENST00000233330 2220 ntTSL 1 (best) BASIC20.82■□□□□ 0.92
CCDC25Q86WR0 C17orf62-204ENST00000437807 2242 ntAPPRIS P1 TSL 2 BASIC20.82■□□□□ 0.92
CCDC25Q86WR0 MTMR14-201ENST00000296003 2494 ntAPPRIS P4 TSL 1 (best) BASIC20.82■□□□□ 0.92
CCDC25Q86WR0 NSDHL-201ENST00000370274 1929 ntAPPRIS P2 TSL 1 (best) BASIC20.82■□□□□ 0.92
Retrieved 100 of 98,524 protein–RNA pairs in 22.9 ms