Protein–RNA interactions for Protein: Q7Z5J4

RAI1, Retinoic acid-induced protein 1, humanhuman

Predicted RBP Predictions only

Length 1,906 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAI1Q7Z5J4 JPT1-206ENST00000476258 2289 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
RAI1Q7Z5J4 TRIM67-203ENST00000449018 2166 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
RAI1Q7Z5J4 C2orf72-201ENST00000373640 3657 ntAPPRIS P1 TSL 2 BASIC17.38■□□□□ 0.37
RAI1Q7Z5J4 ATP5D-201ENST00000215375 997 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
RAI1Q7Z5J4 CABP2-202ENST00000353903 789 ntAPPRIS P1 TSL 5 BASIC17.38■□□□□ 0.37
RAI1Q7Z5J4 USF2-203ENST00000379134 648 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
RAI1Q7Z5J4 HPF1-201ENST00000393381 1230 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
RAI1Q7Z5J4 KRASP1-201ENST00000407852 552 ntBASIC17.38■□□□□ 0.37
RAI1Q7Z5J4 TSPY7P-201ENST00000431358 1114 ntBASIC17.38■□□□□ 0.37
RAI1Q7Z5J4 TSPY1-202ENST00000451548 1160 ntAPPRIS P5 TSL 1 (best) BASIC17.38■□□□□ 0.37
RAI1Q7Z5J4 CES1P1-204ENST00000574030 877 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
RAI1Q7Z5J4 AC022211.2-202ENST00000582668 546 ntTSL 4 BASIC17.38■□□□□ 0.37
RAI1Q7Z5J4 C17orf62-238ENST00000585064 1074 ntAPPRIS P1 TSL 2 BASIC17.38■□□□□ 0.37
RAI1Q7Z5J4 AC091551.1-201ENST00000590722 1228 ntAPPRIS P1 TSL 2 BASIC17.38■□□□□ 0.37
RAI1Q7Z5J4 EML2-201ENST00000245925 2264 ntAPPRIS P3 TSL 1 (best) BASIC17.38■□□□□ 0.37
RAI1Q7Z5J4 S100A14-203ENST00000368701 1080 ntAPPRIS P1 TSL 2 BASIC17.37■□□□□ 0.37
RAI1Q7Z5J4 BCL7B-206ENST00000455335 985 ntTSL 3 BASIC17.37■□□□□ 0.37
RAI1Q7Z5J4 HES2-206ENST00000489730 730 ntTSL 2 BASIC17.37■□□□□ 0.37
RAI1Q7Z5J4 EPHA5-AS1-202ENST00000509473 1177 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
RAI1Q7Z5J4 CRNDE-210ENST00000560912 459 ntTSL 5 BASIC17.37■□□□□ 0.37
RAI1Q7Z5J4 H2AFY-217ENST00000511689 2789 ntAPPRIS P4 TSL 1 (best) BASIC17.37■□□□□ 0.37
RAI1Q7Z5J4 ZNF800-208ENST00000619291 2099 ntTSL 5 BASIC17.37■□□□□ 0.37
RAI1Q7Z5J4 MOGS-202ENST00000409065 2668 ntTSL 5 BASIC17.37■□□□□ 0.37
RAI1Q7Z5J4 BABAM1-213ENST00000601043 1366 ntAPPRIS P3 TSL 2 BASIC17.37■□□□□ 0.37
RAI1Q7Z5J4 CNRIP1-201ENST00000263655 1953 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
RAI1Q7Z5J4 DDRGK1-201ENST00000354488 1306 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
RAI1Q7Z5J4 WDR37-206ENST00000620998 1303 ntTSL 5 BASIC17.37■□□□□ 0.37
RAI1Q7Z5J4 NTAN1-201ENST00000287706 1204 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
RAI1Q7Z5J4 POMC-202ENST00000380794 1295 ntAPPRIS P1 TSL 2 BASIC17.37■□□□□ 0.37
RAI1Q7Z5J4 TSPAN4-209ENST00000409543 1031 ntAPPRIS P1 TSL 5 BASIC17.37■□□□□ 0.37
RAI1Q7Z5J4 AC090877.2-202ENST00000560363 574 ntTSL 2 BASIC17.37■□□□□ 0.37
RAI1Q7Z5J4 AC105020.4-201ENST00000569467 563 ntTSL 4 BASIC17.37■□□□□ 0.37
RAI1Q7Z5J4 AC120498.8-201ENST00000614275 531 ntBASIC17.37■□□□□ 0.37
RAI1Q7Z5J4 AL023875.1-201ENST00000640777 796 ntBASIC17.37■□□□□ 0.37
RAI1Q7Z5J4 MAMSTR-202ENST00000356751 1825 ntTSL 2 BASIC17.37■□□□□ 0.37
RAI1Q7Z5J4 LTK-202ENST00000355166 2940 ntAPPRIS ALT2 TSL 1 (best) BASIC17.37■□□□□ 0.37
RAI1Q7Z5J4 ATP6AP1-201ENST00000369762 2099 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
RAI1Q7Z5J4 ERLEC1-203ENST00000405123 1756 ntTSL 5 BASIC17.37■□□□□ 0.37
RAI1Q7Z5J4 TM7SF2-202ENST00000345348 1490 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
RAI1Q7Z5J4 TSSK6-201ENST00000585580 1467 ntAPPRIS P1 BASIC17.36■□□□□ 0.37
RAI1Q7Z5J4 SQLE-206ENST00000523430 1879 ntTSL 2 BASIC17.36■□□□□ 0.37
RAI1Q7Z5J4 GAS2L1-207ENST00000611648 2482 ntAPPRIS P1 TSL 2 BASIC17.36■□□□□ 0.37
RAI1Q7Z5J4 VKORC1-202ENST00000319788 1077 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
RAI1Q7Z5J4 H3F3A-204ENST00000366816 799 ntAPPRIS P1 TSL 3 BASIC17.36■□□□□ 0.37
RAI1Q7Z5J4 LCE2A-201ENST00000368779 592 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
RAI1Q7Z5J4 CAMLG-202ENST00000514518 895 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
RAI1Q7Z5J4 AC007786.1-201ENST00000587859 709 ntTSL 2 BASIC17.36■□□□□ 0.37
RAI1Q7Z5J4 TNFRSF14-201ENST00000355716 1707 ntAPPRIS P2 TSL 1 (best) BASIC17.36■□□□□ 0.37
RAI1Q7Z5J4 PUF60-203ENST00000453551 1842 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
RAI1Q7Z5J4 E4F1-206ENST00000565090 2028 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
RAI1Q7Z5J4 KRT19-201ENST00000361566 1390 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
RAI1Q7Z5J4 CEBPE-201ENST00000206513 1554 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
RAI1Q7Z5J4 PPP3CC-201ENST00000240139 2189 ntAPPRIS P3 TSL 1 (best) BASIC17.36■□□□□ 0.37
RAI1Q7Z5J4 OAF-201ENST00000328965 2525 ntAPPRIS P2 TSL 1 (best) BASIC17.35■□□□□ 0.37
RAI1Q7Z5J4 SEC11A-201ENST00000268220 1656 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
RAI1Q7Z5J4 AC008687.4-201ENST00000637680 1485 ntAPPRIS P1 TSL 5 BASIC17.35■□□□□ 0.37
RAI1Q7Z5J4 AQP12B-201ENST00000407834 1094 ntAPPRIS P2 TSL 1 (best) BASIC17.35■□□□□ 0.37
RAI1Q7Z5J4 LINC02256-201ENST00000561999 366 ntTSL 3 BASIC17.35■□□□□ 0.37
RAI1Q7Z5J4 AC009065.4-203ENST00000562838 535 ntTSL 2 BASIC17.35■□□□□ 0.37
RAI1Q7Z5J4 CDC42SE2-206ENST00000503291 2025 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
RAI1Q7Z5J4 GPC1-202ENST00000420138 1835 ntTSL 5 BASIC17.35■□□□□ 0.37
RAI1Q7Z5J4 NTN4-207ENST00000553059 1818 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
RAI1Q7Z5J4 ZC3HAV1L-201ENST00000275766 1753 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
RAI1Q7Z5J4 NAE1-203ENST00000379463 1909 ntTSL 2 BASIC17.35■□□□□ 0.37
RAI1Q7Z5J4 MCAT-201ENST00000290429 2056 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
RAI1Q7Z5J4 TOM1L2-210ENST00000542206 1320 ntTSL 2 BASIC17.35■□□□□ 0.37
RAI1Q7Z5J4 IRF3-221ENST00000598808 1468 ntTSL 5 BASIC17.35■□□□□ 0.37
RAI1Q7Z5J4 ALG1-201ENST00000262374 2132 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
RAI1Q7Z5J4 ISG20-210ENST00000560741 800 ntAPPRIS P1 TSL 5 BASIC17.35■□□□□ 0.37
RAI1Q7Z5J4 RARRES2P10-201ENST00000564312 460 ntBASIC17.35■□□□□ 0.37
RAI1Q7Z5J4 AC110285.5-201ENST00000611501 352 ntBASIC17.35■□□□□ 0.37
RAI1Q7Z5J4 AC113410.3-201ENST00000623366 203 ntBASIC17.35■□□□□ 0.37
RAI1Q7Z5J4 SCAMP3-201ENST00000302631 1446 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
RAI1Q7Z5J4 ZDHHC24-203ENST00000526986 1424 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
RAI1Q7Z5J4 CERS1-205ENST00000623927 2558 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
RAI1Q7Z5J4 SNX7-205ENST00000529992 1589 ntTSL 2 BASIC17.35■□□□□ 0.37
RAI1Q7Z5J4 ZNF302-215ENST00000627982 1723 ntAPPRIS ALT2 TSL 5 BASIC17.34■□□□□ 0.37
RAI1Q7Z5J4 HIGD1A-201ENST00000321331 1373 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
RAI1Q7Z5J4 LSM14A-202ENST00000540746 2152 ntTSL 2 BASIC17.34■□□□□ 0.37
RAI1Q7Z5J4 NAPEPLD-208ENST00000427257 1822 ntAPPRIS P1 TSL 2 BASIC17.34■□□□□ 0.37
RAI1Q7Z5J4 CELF2-211ENST00000632065 1952 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
RAI1Q7Z5J4 C19orf84-202ENST00000574814 1318 ntAPPRIS P2 TSL 1 (best) BASIC17.34■□□□□ 0.37
RAI1Q7Z5J4 KIAA1522-201ENST00000294521 878 ntAPPRIS ALT2 TSL 2 BASIC17.34■□□□□ 0.37
RAI1Q7Z5J4 TREX2-204ENST00000370212 861 ntTSL 5 BASIC17.34■□□□□ 0.37
RAI1Q7Z5J4 TREX2-205ENST00000370231 1255 ntAPPRIS P1 TSL 5 BASIC17.34■□□□□ 0.37
RAI1Q7Z5J4 TREX2-207ENST00000393862 907 ntAPPRIS P1 TSL 2 BASIC17.34■□□□□ 0.37
RAI1Q7Z5J4 COL11A2-204ENST00000395194 1194 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
RAI1Q7Z5J4 AMZ1-202ENST00000407112 1862 ntTSL 2 BASIC17.34■□□□□ 0.37
RAI1Q7Z5J4 ABHD17AP6-201ENST00000458502 1044 ntBASIC17.34■□□□□ 0.37
RAI1Q7Z5J4 PDCD6-206ENST00000507528 1088 ntAPPRIS ALT1 TSL 1 (best) BASIC17.34■□□□□ 0.37
RAI1Q7Z5J4 ZNF688-205ENST00000563707 244 ntTSL 3 BASIC17.34■□□□□ 0.37
RAI1Q7Z5J4 CPEB1-218ENST00000620182 2422 ntTSL 2 BASIC17.34■□□□□ 0.37
RAI1Q7Z5J4 UNC93B1-201ENST00000227471 2316 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
RAI1Q7Z5J4 ADRM1-201ENST00000253003 1478 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
RAI1Q7Z5J4 PGPEP1L-202ENST00000535714 1483 ntTSL 2 BASIC17.34■□□□□ 0.37
RAI1Q7Z5J4 BACE1-203ENST00000428381 1333 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
RAI1Q7Z5J4 WWTR1-AS1-202ENST00000479752 1700 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
RAI1Q7Z5J4 RGS20-202ENST00000297313 2104 ntTSL 1 (best) BASIC17.33■□□□□ 0.37
RAI1Q7Z5J4 FAM83D-202ENST00000619850 2361 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
RAI1Q7Z5J4 GSX2-201ENST00000326902 1812 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
Retrieved 100 of 98,524 protein–RNA pairs in 20.7 ms