Protein–RNA interactions for Protein: Q5TC12

ATPAF1, ATP synthase mitochondrial F1 complex assembly factor 1, humanhuman

Predicted RBP Predictions only

Length 328 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ATPAF1Q5TC12 MON1A-201ENST00000296473 2370 ntAPPRIS P3 TSL 1 (best) BASIC17.53■□□□□ 0.4
ATPAF1Q5TC12 LHX9-206ENST00000561173 2144 ntTSL 5 BASIC17.53■□□□□ 0.4
ATPAF1Q5TC12 ATP6V0E2-203ENST00000456496 2722 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
ATPAF1Q5TC12 ATP6V0E2-213ENST00000615196 2727 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
ATPAF1Q5TC12 NFIL3-201ENST00000297689 2085 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
ATPAF1Q5TC12 SLC16A5-202ENST00000450736 2051 ntAPPRIS P2 TSL 1 (best) BASIC17.53■□□□□ 0.4
ATPAF1Q5TC12 MAD2L2-204ENST00000376667 872 ntAPPRIS P1 TSL 2 BASIC17.53■□□□□ 0.4
ATPAF1Q5TC12 IL15RA-201ENST00000379971 588 ntTSL 3 BASIC17.53■□□□□ 0.4
ATPAF1Q5TC12 GXYLT1P2-201ENST00000433312 1230 ntBASIC17.53■□□□□ 0.4
ATPAF1Q5TC12 ABCC6P2-202ENST00000542005 706 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
ATPAF1Q5TC12 ABCC6-204ENST00000575728 714 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
ATPAF1Q5TC12 TANGO2-217ENST00000456048 2439 ntTSL 2 BASIC17.53■□□□□ 0.4
ATPAF1Q5TC12 DMRT2-205ENST00000382255 2367 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
ATPAF1Q5TC12 KRT16P2-201ENST00000414673 1423 ntBASIC17.53■□□□□ 0.4
ATPAF1Q5TC12 MEN1-202ENST00000315422 3148 ntAPPRIS ALT1 TSL 5 BASIC17.53■□□□□ 0.4
ATPAF1Q5TC12 DET1-207ENST00000564406 2315 ntTSL 2 BASIC17.53■□□□□ 0.4
ATPAF1Q5TC12 ARNTL2-209ENST00000546179 1861 ntAPPRIS ALT2 TSL 2 BASIC17.52■□□□□ 0.4
ATPAF1Q5TC12 GRB10-201ENST00000335866 5032 ntTSL 1 (best) BASIC17.52■□□□□ 0.4
ATPAF1Q5TC12 CBR1-201ENST00000290349 1293 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
ATPAF1Q5TC12 FAM207A-201ENST00000291634 927 ntAPPRIS P3 TSL 1 (best) BASIC17.52■□□□□ 0.4
ATPAF1Q5TC12 LY6E-201ENST00000292494 1181 ntAPPRIS P2 TSL 1 (best) BASIC17.52■□□□□ 0.4
ATPAF1Q5TC12 IDH2-203ENST00000559482 1278 ntTSL 5 BASIC17.52■□□□□ 0.4
ATPAF1Q5TC12 AC106820.5-201ENST00000566085 789 ntTSL 3 BASIC17.52■□□□□ 0.4
ATPAF1Q5TC12 TFG-210ENST00000620299 1289 ntTSL 5 BASIC17.52■□□□□ 0.4
ATPAF1Q5TC12 AL162377.1-201ENST00000618844 1793 ntBASIC17.52■□□□□ 0.4
ATPAF1Q5TC12 AC008073.3-201ENST00000610442 2281 ntAPPRIS P1 TSL 2 BASIC17.52■□□□□ 0.4
ATPAF1Q5TC12 SPI1-202ENST00000378538 1403 ntAPPRIS P3 TSL 1 (best) BASIC17.52■□□□□ 0.4
ATPAF1Q5TC12 ZNF281-202ENST00000367352 2933 ntAPPRIS ALT2 TSL 2 BASIC17.52■□□□□ 0.4
ATPAF1Q5TC12 PDE4DIP-214ENST00000479408 2746 ntTSL 5 BASIC17.52■□□□□ 0.39
ATPAF1Q5TC12 ZFP69-202ENST00000372706 2871 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.39
ATPAF1Q5TC12 AC007128.1-201ENST00000424460 1853 ntTSL 5 BASIC17.52■□□□□ 0.39
ATPAF1Q5TC12 SMAGP-205ENST00000603864 1518 ntAPPRIS P1 TSL 2 BASIC17.52■□□□□ 0.39
ATPAF1Q5TC12 PANO1-201ENST00000620120 1680 ntAPPRIS P1 BASIC17.52■□□□□ 0.39
ATPAF1Q5TC12 ACBD4-201ENST00000321854 1806 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
ATPAF1Q5TC12 GPAA1-202ENST00000361036 1840 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
ATPAF1Q5TC12 IVD-206ENST00000487418 1809 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
ATPAF1Q5TC12 AC007225.1-201ENST00000566331 1836 ntBASIC17.51■□□□□ 0.39
ATPAF1Q5TC12 STXBP6-203ENST00000419632 1970 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
ATPAF1Q5TC12 LYSMD4-210ENST00000545021 2431 ntTSL 4 BASIC17.51■□□□□ 0.39
ATPAF1Q5TC12 UBE2Z-201ENST00000360943 3122 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
ATPAF1Q5TC12 NAA20-201ENST00000310450 920 ntTSL 2 BASIC17.51■□□□□ 0.39
ATPAF1Q5TC12 RAC1-201ENST00000348035 2323 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
ATPAF1Q5TC12 MPRIP-203ENST00000395806 527 ntTSL 3 BASIC17.51■□□□□ 0.39
ATPAF1Q5TC12 KRT18P11-201ENST00000435214 1283 ntBASIC17.51■□□□□ 0.39
ATPAF1Q5TC12 AGAP1-IT1-201ENST00000440498 664 ntTSL 3 BASIC17.51■□□□□ 0.39
ATPAF1Q5TC12 ATP6V0B-205ENST00000472174 1298 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
ATPAF1Q5TC12 AC061975.6-201ENST00000579045 1553 ntBASIC17.51■□□□□ 0.39
ATPAF1Q5TC12 NEDD4L-225ENST00000589054 1033 ntTSL 3 BASIC17.51■□□□□ 0.39
ATPAF1Q5TC12 AP000547.3-201ENST00000592918 1576 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
ATPAF1Q5TC12 FAM213B-204ENST00000419916 2749 ntAPPRIS P3 TSL 1 (best) BASIC17.51■□□□□ 0.39
ATPAF1Q5TC12 MAPK15-201ENST00000338033 1961 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
ATPAF1Q5TC12 ZNF622-201ENST00000308683 1699 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
ATPAF1Q5TC12 PLSCR3-201ENST00000324822 1689 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
ATPAF1Q5TC12 AGTR1-209ENST00000497524 2359 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
ATPAF1Q5TC12 MAPK8IP1-201ENST00000241014 3050 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
ATPAF1Q5TC12 COL13A1-205ENST00000398978 3093 ntAPPRIS P4 TSL 5 BASIC17.51■□□□□ 0.39
ATPAF1Q5TC12 FFAR3-201ENST00000327809 1796 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
ATPAF1Q5TC12 TYMP-202ENST00000395678 1614 ntAPPRIS P3 TSL 1 (best) BASIC17.5■□□□□ 0.39
ATPAF1Q5TC12 NAA20-203ENST00000398602 1604 ntTSL 5 BASIC17.5■□□□□ 0.39
ATPAF1Q5TC12 NFKBIE-204ENST00000619360 2327 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
ATPAF1Q5TC12 SMG8-203ENST00000578922 2178 ntBASIC17.5■□□□□ 0.39
ATPAF1Q5TC12 NGLY1-204ENST00000396649 2024 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
ATPAF1Q5TC12 SPON2-201ENST00000290902 1869 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
ATPAF1Q5TC12 LRFN4-201ENST00000309602 2431 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
ATPAF1Q5TC12 HDHD5-201ENST00000155674 1735 ntAPPRIS P3 TSL 1 (best) BASIC17.5■□□□□ 0.39
ATPAF1Q5TC12 HAND1-201ENST00000231121 1738 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
ATPAF1Q5TC12 TM7SF2-201ENST00000279263 1722 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
ATPAF1Q5TC12 FAM213A-202ENST00000372185 1723 ntTSL 2 BASIC17.5■□□□□ 0.39
ATPAF1Q5TC12 AC007249.2-201ENST00000553181 1737 ntTSL 5 BASIC17.5■□□□□ 0.39
ATPAF1Q5TC12 RNPEPL1-201ENST00000270357 5658 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
ATPAF1Q5TC12 DPF1-203ENST00000414789 1960 ntTSL 2 BASIC17.5■□□□□ 0.39
ATPAF1Q5TC12 STX7-201ENST00000367937 1090 ntTSL 5 BASIC17.5■□□□□ 0.39
ATPAF1Q5TC12 MANBAL-202ENST00000373606 1208 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
ATPAF1Q5TC12 MELTF-AS1-202ENST00000415244 951 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
ATPAF1Q5TC12 PARL-206ENST00000435888 1098 ntTSL 5 BASIC17.5■□□□□ 0.39
ATPAF1Q5TC12 AC092368.3-201ENST00000562549 1107 ntTSL 5 BASIC17.5■□□□□ 0.39
ATPAF1Q5TC12 TNIP2-203ENST00000503235 1653 ntTSL 3 BASIC17.5■□□□□ 0.39
ATPAF1Q5TC12 KMT5C-201ENST00000255613 2308 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
ATPAF1Q5TC12 ADAP1-216ENST00000539900 2178 ntTSL 2 BASIC17.5■□□□□ 0.39
ATPAF1Q5TC12 EIPR1-206ENST00000443925 1771 ntTSL 3 BASIC17.5■□□□□ 0.39
ATPAF1Q5TC12 TMEM214-203ENST00000404032 2830 ntTSL 2 BASIC17.5■□□□□ 0.39
ATPAF1Q5TC12 AL512408.1-201ENST00000569378 2000 ntBASIC17.5■□□□□ 0.39
ATPAF1Q5TC12 ZNF324B-202ENST00000545523 2368 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
ATPAF1Q5TC12 PNMA8B-202ENST00000599531 5308 ntAPPRIS P1 BASIC17.5■□□□□ 0.39
ATPAF1Q5TC12 SPOCK3-215ENST00000510741 1963 ntAPPRIS ALT2 TSL 5 BASIC17.49■□□□□ 0.39
ATPAF1Q5TC12 ARL6IP4-204ENST00000392435 1339 ntAPPRIS ALT2 TSL 1 (best) BASIC17.49■□□□□ 0.39
ATPAF1Q5TC12 FASTK-201ENST00000297532 1827 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
ATPAF1Q5TC12 USP45-202ENST00000329966 1444 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
ATPAF1Q5TC12 AGAP5-203ENST00000581191 2779 ntAPPRIS ALT2 TSL 5 BASIC17.49■□□□□ 0.39
ATPAF1Q5TC12 MAP4K4-204ENST00000350198 7316 ntTSL 5 BASIC17.49■□□□□ 0.39
ATPAF1Q5TC12 IDH1-205ENST00000446179 2298 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
ATPAF1Q5TC12 KIAA1324L-208ENST00000450689 6841 ntAPPRIS ALT2 TSL 5 BASIC17.49■□□□□ 0.39
ATPAF1Q5TC12 DTX3-201ENST00000337737 2029 ntAPPRIS P3 TSL 2 BASIC17.49■□□□□ 0.39
ATPAF1Q5TC12 ITPKB-202ENST00000366784 3146 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
ATPAF1Q5TC12 AC104581.1-201ENST00000324348 2852 ntAPPRIS P1 TSL 2 BASIC17.49■□□□□ 0.39
ATPAF1Q5TC12 ADAMTS19-205ENST00000638972 5089 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
ATPAF1Q5TC12 SDHA-201ENST00000264932 2390 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
ATPAF1Q5TC12 NFKBIB-201ENST00000313582 1159 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
ATPAF1Q5TC12 SERBP1-201ENST00000361219 2103 ntAPPRIS ALT1 TSL 1 (best) BASIC17.49■□□□□ 0.39
ATPAF1Q5TC12 HSCB-202ENST00000398941 955 ntTSL 2 BASIC17.49■□□□□ 0.39
Retrieved 100 of 98,524 protein–RNA pairs in 22.8 ms