Protein–RNA interactions for Protein: Q5T3J3

LRIF1, Ligand-dependent nuclear receptor-interacting factor 1, humanhuman

Predictions only

Length 769 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRIF1Q5T3J3 CRTC1-204ENST00000601916 1834 ntTSL 5 BASIC19.11■□□□□ 0.65
LRIF1Q5T3J3 TMEM179-206ENST00000616017 1645 ntBASIC19.11■□□□□ 0.65
LRIF1Q5T3J3 SPNS1-201ENST00000311008 2208 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
LRIF1Q5T3J3 NRL-206ENST00000561028 2103 ntAPPRIS P1 TSL 2 BASIC19.1■□□□□ 0.65
LRIF1Q5T3J3 Z83844.2-201ENST00000456099 1945 ntTSL 2 BASIC19.1■□□□□ 0.65
LRIF1Q5T3J3 CCDC62-204ENST00000392441 2936 ntAPPRIS ALT2 TSL 5 BASIC19.1■□□□□ 0.65
LRIF1Q5T3J3 ALG5-202ENST00000443765 1119 ntTSL 2 BASIC19.1■□□□□ 0.65
LRIF1Q5T3J3 LINC02199-202ENST00000510067 1008 ntTSL 2 BASIC19.1■□□□□ 0.65
LRIF1Q5T3J3 TESC-206ENST00000541210 936 ntTSL 3 BASIC19.1■□□□□ 0.65
LRIF1Q5T3J3 AP005205.2-201ENST00000577327 491 ntTSL 2 BASIC19.1■□□□□ 0.65
LRIF1Q5T3J3 FAM21FP-204ENST00000608637 956 ntBASIC19.1■□□□□ 0.65
LRIF1Q5T3J3 AC093762.3-201ENST00000641918 318 ntAPPRIS P1 BASIC19.1■□□□□ 0.65
LRIF1Q5T3J3 GPR62-201ENST00000322241 2191 ntAPPRIS P1 BASIC19.1■□□□□ 0.65
LRIF1Q5T3J3 TMPRSS6-207ENST00000442782 1695 ntTSL 1 (best) BASIC19.1■□□□□ 0.65
LRIF1Q5T3J3 FGFRL1-203ENST00000504138 1663 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
LRIF1Q5T3J3 GSTM3-202ENST00000361066 1565 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
LRIF1Q5T3J3 PDLIM5-205ENST00000380180 2020 ntTSL 1 (best) BASIC19.1■□□□□ 0.65
LRIF1Q5T3J3 RHOA-202ENST00000418115 2031 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
LRIF1Q5T3J3 AL691432.2-201ENST00000607222 2038 ntBASIC19.1■□□□□ 0.65
LRIF1Q5T3J3 GABRD-201ENST00000378585 1961 ntAPPRIS P2 TSL 1 (best) BASIC19.1■□□□□ 0.65
LRIF1Q5T3J3 DOK2-201ENST00000276420 1936 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
LRIF1Q5T3J3 NSMF-203ENST00000371472 1852 ntAPPRIS P3 TSL 2 BASIC19.09■□□□□ 0.65
LRIF1Q5T3J3 STMN3-201ENST00000370053 2255 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
LRIF1Q5T3J3 CTNND2-201ENST00000304623 5481 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
LRIF1Q5T3J3 ESR1-210ENST00000456483 1368 ntTSL 1 (best) BASIC19.09■□□□□ 0.65
LRIF1Q5T3J3 AC019069.1-201ENST00000610008 1333 ntBASIC19.09■□□□□ 0.65
LRIF1Q5T3J3 ZNF582-202ENST00000586929 2053 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
LRIF1Q5T3J3 AL121761.1-202ENST00000412571 415 ntTSL 2 BASIC19.09■□□□□ 0.65
LRIF1Q5T3J3 PRSS22-203ENST00000571228 1037 ntTSL 2 BASIC19.09■□□□□ 0.65
LRIF1Q5T3J3 F2RL3-202ENST00000599210 613 ntTSL 2 BASIC19.09■□□□□ 0.65
LRIF1Q5T3J3 AC004528.2-201ENST00000610701 440 ntTSL 5 BASIC19.09■□□□□ 0.65
LRIF1Q5T3J3 DISC1-202ENST00000317586 2636 ntAPPRIS ALT2 TSL 1 (best) BASIC19.09■□□□□ 0.65
LRIF1Q5T3J3 SCARB1-211ENST00000546215 1597 ntTSL 1 (best) BASIC19.09■□□□□ 0.65
LRIF1Q5T3J3 AC005224.2-201ENST00000571192 1885 ntTSL 2 BASIC19.09■□□□□ 0.65
LRIF1Q5T3J3 SCRN2-201ENST00000290216 1548 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
LRIF1Q5T3J3 TPD52-209ENST00000518937 2856 ntTSL 2 BASIC19.09■□□□□ 0.65
LRIF1Q5T3J3 BAALC-203ENST00000309982 2831 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
LRIF1Q5T3J3 ISLR2-204ENST00000453268 2812 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
LRIF1Q5T3J3 RNF8-204ENST00000469731 1800 ntTSL 5 BASIC19.09■□□□□ 0.65
LRIF1Q5T3J3 CPLX3-201ENST00000395018 2082 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
LRIF1Q5T3J3 SDHA-201ENST00000264932 2390 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.65
LRIF1Q5T3J3 NETO1-207ENST00000583169 2357 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.65
LRIF1Q5T3J3 CXXC5-201ENST00000302517 2658 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.65
LRIF1Q5T3J3 DPF1-203ENST00000414789 1960 ntTSL 2 BASIC19.08■□□□□ 0.65
LRIF1Q5T3J3 AC008073.3-201ENST00000610442 2281 ntAPPRIS P1 TSL 2 BASIC19.08■□□□□ 0.65
LRIF1Q5T3J3 AL158211.5-201ENST00000623583 2518 ntBASIC19.08■□□□□ 0.65
LRIF1Q5T3J3 GLI4-201ENST00000340042 1341 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.65
LRIF1Q5T3J3 LZTS3-201ENST00000329152 5257 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.64
LRIF1Q5T3J3 UBE2C-201ENST00000243893 476 ntTSL 2 BASIC19.08■□□□□ 0.64
LRIF1Q5T3J3 RAP1B-202ENST00000341355 714 ntAPPRIS P1 TSL 3 BASIC19.08■□□□□ 0.64
LRIF1Q5T3J3 JTB-203ENST00000368589 1216 ntTSL 2 BASIC19.08■□□□□ 0.64
LRIF1Q5T3J3 AC093817.1-201ENST00000507296 812 ntTSL 3 BASIC19.08■□□□□ 0.64
LRIF1Q5T3J3 ACTR5-201ENST00000243903 2565 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.64
LRIF1Q5T3J3 DCPS-201ENST00000263579 1479 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.64
LRIF1Q5T3J3 TRMU-201ENST00000290846 1940 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.64
LRIF1Q5T3J3 MSLN-201ENST00000382862 2116 ntAPPRIS P3 TSL 5 BASIC19.07■□□□□ 0.64
LRIF1Q5T3J3 SPINT2-202ENST00000454580 1367 ntTSL 1 (best) BASIC19.07■□□□□ 0.64
LRIF1Q5T3J3 PNKP-215ENST00000600910 1600 ntTSL 5 BASIC19.07■□□□□ 0.64
LRIF1Q5T3J3 LRRC14-201ENST00000292524 5328 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
LRIF1Q5T3J3 WASH6P-203ENST00000460206 1826 ntTSL 5 BASIC19.07■□□□□ 0.64
LRIF1Q5T3J3 ACOT2-204ENST00000613168 1553 ntAPPRIS P5 TSL 1 (best) BASIC19.07■□□□□ 0.64
LRIF1Q5T3J3 TALDO1-201ENST00000319006 1346 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
LRIF1Q5T3J3 AC116562.4-201ENST00000641316 2276 ntBASIC19.07■□□□□ 0.64
LRIF1Q5T3J3 WFIKKN1-201ENST00000319070 2028 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
LRIF1Q5T3J3 BEST4-201ENST00000372207 2047 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
LRIF1Q5T3J3 PDE4DIP-214ENST00000479408 2746 ntTSL 5 BASIC19.07■□□□□ 0.64
LRIF1Q5T3J3 INTS12-206ENST00000451321 1975 ntTSL 1 (best) BASIC19.07■□□□□ 0.64
LRIF1Q5T3J3 COX20-201ENST00000366528 568 ntTSL 2 BASIC19.07■□□□□ 0.64
LRIF1Q5T3J3 YBX1P1-201ENST00000445822 960 ntBASIC19.07■□□□□ 0.64
LRIF1Q5T3J3 AL731577.2-201ENST00000508096 555 ntTSL 2 BASIC19.07■□□□□ 0.64
LRIF1Q5T3J3 AC008750.8-201ENST00000600067 551 ntAPPRIS P1 TSL 5 BASIC19.07■□□□□ 0.64
LRIF1Q5T3J3 AL136982.7-201ENST00000609363 465 ntTSL 4 BASIC19.07■□□□□ 0.64
LRIF1Q5T3J3 LGI3-202ENST00000424267 3114 ntTSL 1 (best) BASIC19.07■□□□□ 0.64
LRIF1Q5T3J3 ODC1-202ENST00000405333 1943 ntAPPRIS P1 TSL 2 BASIC19.07■□□□□ 0.64
LRIF1Q5T3J3 CACNA1A-218ENST00000635895 8657 ntAPPRIS ALT2 TSL 5 BASIC19.07■□□□□ 0.64
LRIF1Q5T3J3 CACNA1A-257ENST00000638009 8665 ntAPPRIS ALT2 TSL 1 (best) BASIC19.07■□□□□ 0.64
LRIF1Q5T3J3 RAB28-208ENST00000630951 1679 ntTSL 5 BASIC19.07■□□□□ 0.64
LRIF1Q5T3J3 GPR50-AS1-201ENST00000454196 1620 ntTSL 2 BASIC19.07■□□□□ 0.64
LRIF1Q5T3J3 PDE9A-212ENST00000398234 1783 ntTSL 1 (best) BASIC19.06■□□□□ 0.64
LRIF1Q5T3J3 DNASE1L2-203ENST00000564065 2194 ntTSL 1 (best) BASIC19.06■□□□□ 0.64
LRIF1Q5T3J3 ACY1-207ENST00000476854 1319 ntTSL 3 BASIC19.06■□□□□ 0.64
LRIF1Q5T3J3 LENG9-203ENST00000611161 1916 ntAPPRIS P1 BASIC19.06■□□□□ 0.64
LRIF1Q5T3J3 STARD10-213ENST00000538536 1678 ntTSL 1 (best) BASIC19.06■□□□□ 0.64
LRIF1Q5T3J3 GABARAPL2-205ENST00000568455 646 ntTSL 3 BASIC19.06■□□□□ 0.64
LRIF1Q5T3J3 RAVER2-201ENST00000294428 4398 ntAPPRIS ALT2 TSL 5 BASIC19.06■□□□□ 0.64
LRIF1Q5T3J3 CDC42SE2-206ENST00000503291 2025 ntTSL 1 (best) BASIC19.06■□□□□ 0.64
LRIF1Q5T3J3 FICD-201ENST00000361549 1816 ntTSL 1 (best) BASIC19.06■□□□□ 0.64
LRIF1Q5T3J3 TINAGL1-211ENST00000537531 1841 ntAPPRIS ALT2 TSL 5 BASIC19.06■□□□□ 0.64
LRIF1Q5T3J3 SLC6A11-202ENST00000454147 2794 ntTSL 1 (best) BASIC19.06■□□□□ 0.64
LRIF1Q5T3J3 AC004854.2-201ENST00000608450 1441 ntBASIC19.06■□□□□ 0.64
LRIF1Q5T3J3 TFEB-211ENST00000420312 1996 ntTSL 5 BASIC19.06■□□□□ 0.64
LRIF1Q5T3J3 UBE2L6-202ENST00000340573 1573 ntTSL 1 (best) BASIC19.06■□□□□ 0.64
LRIF1Q5T3J3 WT1-212ENST00000640146 1554 ntAPPRIS P3 TSL 1 (best) BASIC19.06■□□□□ 0.64
LRIF1Q5T3J3 SCYL2-201ENST00000360820 5779 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
LRIF1Q5T3J3 AL645608.1-202ENST00000417705 1389 ntTSL 3 BASIC19.06■□□□□ 0.64
LRIF1Q5T3J3 DVL3-203ENST00000431765 2294 ntTSL 5 BASIC19.05■□□□□ 0.64
LRIF1Q5T3J3 CD37-204ENST00000535669 1674 ntTSL 2 BASIC19.05■□□□□ 0.64
LRIF1Q5T3J3 SPNS2-201ENST00000329078 3447 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
LRIF1Q5T3J3 UHRF1-203ENST00000615884 2651 ntAPPRIS P1 TSL 2 BASIC19.05■□□□□ 0.64
LRIF1Q5T3J3 CNRIP1-201ENST00000263655 1953 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
Retrieved 100 of 98,524 protein–RNA pairs in 42.9 ms