Protein–RNA interactions for Protein: Q53EL6

PDCD4, Programmed cell death protein 4, humanhuman

Known RBP Predictions only

Length 469 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDCD4Q53EL6 ELANE-202ENST00000590230 1028 ntAPPRIS P1 TSL 5 BASIC19.45■□□□□ 0.7
PDCD4Q53EL6 GSDMD-212ENST00000533063 1800 ntAPPRIS ALT2 TSL 1 (best) BASIC19.45■□□□□ 0.7
PDCD4Q53EL6 FBLN1-204ENST00000402984 2355 ntTSL 5 BASIC19.45■□□□□ 0.7
PDCD4Q53EL6 LINC00482-201ENST00000332012 2023 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
PDCD4Q53EL6 IKZF1-209ENST00000438033 1748 ntTSL 2 BASIC19.45■□□□□ 0.7
PDCD4Q53EL6 ZDHHC5-201ENST00000287169 4666 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
PDCD4Q53EL6 GNB4-204ENST00000468623 1360 ntAPPRIS P1 TSL 2 BASIC19.44■□□□□ 0.7
PDCD4Q53EL6 RHOBTB3-201ENST00000379982 5537 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
PDCD4Q53EL6 NBL1-209ENST00000548815 1953 ntAPPRIS P3 TSL 3 BASIC19.44■□□□□ 0.7
PDCD4Q53EL6 MBD3-207ENST00000590550 2782 ntTSL 2 BASIC19.44■□□□□ 0.7
PDCD4Q53EL6 PRDM1-202ENST00000369091 2612 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
PDCD4Q53EL6 CSNK1D-203ENST00000392334 2047 ntAPPRIS ALT1 TSL 1 (best) BASIC19.44■□□□□ 0.7
PDCD4Q53EL6 KRT8P36-201ENST00000489121 1440 ntBASIC19.44■□□□□ 0.7
PDCD4Q53EL6 B3GALNT1-212ENST00000488170 1660 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
PDCD4Q53EL6 HRASLS5-201ENST00000301790 1166 ntAPPRIS P3 TSL 1 (best) BASIC19.44■□□□□ 0.7
PDCD4Q53EL6 SLC39A3-203ENST00000545664 1219 ntTSL 2 BASIC19.44■□□□□ 0.7
PDCD4Q53EL6 IGFALS-203ENST00000568221 730 ntTSL 4 BASIC19.44■□□□□ 0.7
PDCD4Q53EL6 KCNH2-201ENST00000262186 4286 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
PDCD4Q53EL6 CHP2-201ENST00000300113 2382 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
PDCD4Q53EL6 PARP15-202ENST00000464300 2156 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
PDCD4Q53EL6 ADAP1-216ENST00000539900 2178 ntTSL 2 BASIC19.44■□□□□ 0.7
PDCD4Q53EL6 FDXR-204ENST00000442102 1967 ntTSL 2 BASIC19.44■□□□□ 0.7
PDCD4Q53EL6 MMP23B-201ENST00000356026 1326 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
PDCD4Q53EL6 HSPD1-202ENST00000388968 2455 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
PDCD4Q53EL6 CERKL-204ENST00000374970 1392 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
PDCD4Q53EL6 TMEM175-212ENST00000508204 1399 ntTSL 3 BASIC19.44■□□□□ 0.7
PDCD4Q53EL6 RIMBP3C-202ENST00000433039 5784 ntAPPRIS P2 BASIC19.44■□□□□ 0.7
PDCD4Q53EL6 MRM1-204ENST00000614766 1857 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
PDCD4Q53EL6 CASP9-210ENST00000546424 4463 ntAPPRIS ALT2 TSL 5 BASIC19.43■□□□□ 0.7
PDCD4Q53EL6 IGFALS-201ENST00000215539 2116 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
PDCD4Q53EL6 ZNF324B-202ENST00000545523 2368 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
PDCD4Q53EL6 SNAP91-211ENST00000520213 2168 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
PDCD4Q53EL6 P2RX2-201ENST00000343948 1494 ntAPPRIS P4 TSL 1 (best) BASIC19.43■□□□□ 0.7
PDCD4Q53EL6 PAGR1-201ENST00000320330 1702 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
PDCD4Q53EL6 C3orf18-203ENST00000426034 2486 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
PDCD4Q53EL6 C2orf54-201ENST00000307486 2017 ntAPPRIS ALT2 TSL 1 (best) BASIC19.43■□□□□ 0.7
PDCD4Q53EL6 C11orf91-201ENST00000379011 811 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
PDCD4Q53EL6 AC073343.2-201ENST00000413182 548 ntTSL 4 BASIC19.43■□□□□ 0.7
PDCD4Q53EL6 AC027612.3-201ENST00000413684 1047 ntBASIC19.43■□□□□ 0.7
PDCD4Q53EL6 LINC01816-201ENST00000414141 662 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
PDCD4Q53EL6 AC011511.3-201ENST00000587088 355 ntTSL 2 BASIC19.43■□□□□ 0.7
PDCD4Q53EL6 SMARCD2-212ENST00000613943 2342 ntTSL 5 BASIC19.43■□□□□ 0.7
PDCD4Q53EL6 KMT5B-204ENST00000402185 1881 ntTSL 2 BASIC19.43■□□□□ 0.7
PDCD4Q53EL6 LMLN-204ENST00000420910 2423 ntAPPRIS P2 TSL 1 (best) BASIC19.43■□□□□ 0.7
PDCD4Q53EL6 AC125437.2-201ENST00000625180 2167 ntBASIC19.43■□□□□ 0.7
PDCD4Q53EL6 MEF2A-202ENST00000354410 5824 ntAPPRIS P3 TSL 1 (best) BASIC19.43■□□□□ 0.7
PDCD4Q53EL6 NDRG2-242ENST00000555158 2216 ntAPPRIS ALT1 TSL 1 (best) BASIC19.43■□□□□ 0.7
PDCD4Q53EL6 STXBP6-203ENST00000419632 1970 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
PDCD4Q53EL6 ASCL4-201ENST00000342331 2260 ntAPPRIS P1 BASIC19.42■□□□□ 0.7
PDCD4Q53EL6 RNF135-205ENST00000535306 2098 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
PDCD4Q53EL6 LBX2-AS1-202ENST00000603175 2083 ntBASIC19.42■□□□□ 0.7
PDCD4Q53EL6 C19orf25-202ENST00000436106 2403 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
PDCD4Q53EL6 CCDC151-201ENST00000356392 2107 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
PDCD4Q53EL6 EIF3J-202ENST00000424492 1550 ntTSL 4 BASIC19.42■□□□□ 0.7
PDCD4Q53EL6 IGHV3-33-201ENST00000390615 431 ntAPPRIS P1 BASIC19.42■□□□□ 0.7
PDCD4Q53EL6 CDKN2AIPNL-201ENST00000395009 800 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
PDCD4Q53EL6 ATPIF1-204ENST00000497986 599 ntTSL 2 BASIC19.42■□□□□ 0.7
PDCD4Q53EL6 PAFAH1B2-205ENST00000529887 1056 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
PDCD4Q53EL6 IGHV3-30-201ENST00000603660 431 ntAPPRIS P1 BASIC19.42■□□□□ 0.7
PDCD4Q53EL6 AC104187.1-201ENST00000607510 612 ntBASIC19.42■□□□□ 0.7
PDCD4Q53EL6 PI4KB-213ENST00000529142 2603 ntTSL 2 BASIC19.42■□□□□ 0.7
PDCD4Q53EL6 TAF4-201ENST00000252996 4628 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
PDCD4Q53EL6 GATAD1-201ENST00000287957 3361 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
PDCD4Q53EL6 DALRD3-205ENST00000440857 2014 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
PDCD4Q53EL6 LHX3-202ENST00000371748 2365 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
PDCD4Q53EL6 HAUS4-203ENST00000347758 1428 ntTSL 2 BASIC19.42■□□□□ 0.7
PDCD4Q53EL6 ALG1-202ENST00000544428 1419 ntTSL 2 BASIC19.42■□□□□ 0.7
PDCD4Q53EL6 ZFP69-202ENST00000372706 2871 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
PDCD4Q53EL6 C17orf62-204ENST00000437807 2242 ntAPPRIS P1 TSL 2 BASIC19.41■□□□□ 0.7
PDCD4Q53EL6 STMN4-202ENST00000350889 2288 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
PDCD4Q53EL6 FBXO27-201ENST00000292853 2330 ntAPPRIS P2 TSL 1 (best) BASIC19.41■□□□□ 0.7
PDCD4Q53EL6 UTP4-201ENST00000314423 2322 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
PDCD4Q53EL6 CLINT1-207ENST00000523908 2346 ntAPPRIS ALT1 TSL 1 (best) BASIC19.41■□□□□ 0.7
PDCD4Q53EL6 ZBTB7A-201ENST00000322357 5422 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
PDCD4Q53EL6 HOXA4-202ENST00000428284 1595 ntAPPRIS P1 TSL 2 BASIC19.41■□□□□ 0.7
PDCD4Q53EL6 MAPT-210ENST00000535772 5718 ntTSL 5 BASIC19.41■□□□□ 0.7
PDCD4Q53EL6 RGMB-207ENST00000513185 2052 ntAPPRIS ALT2 TSL 2 BASIC19.41■□□□□ 0.7
PDCD4Q53EL6 FGFRL1-203ENST00000504138 1663 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
PDCD4Q53EL6 STOML2-201ENST00000356493 1278 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
PDCD4Q53EL6 CRB3-202ENST00000356762 733 ntAPPRIS P4 TSL 1 (best) BASIC19.41■□□□□ 0.7
PDCD4Q53EL6 MFSD14C-201ENST00000375223 619 ntAPPRIS ALT2 TSL 5 BASIC19.41■□□□□ 0.7
PDCD4Q53EL6 AP002748.1-201ENST00000504911 580 ntTSL 3 BASIC19.41■□□□□ 0.7
PDCD4Q53EL6 TUNAR-203ENST00000554321 767 ntAPPRIS P1 TSL 4 BASIC19.41■□□□□ 0.7
PDCD4Q53EL6 CCDC92B-201ENST00000575506 885 ntBASIC19.41■□□□□ 0.7
PDCD4Q53EL6 AP001160.3-201ENST00000601484 763 ntBASIC19.41■□□□□ 0.7
PDCD4Q53EL6 STIM2-211ENST00000639195 2265 ntAPPRIS ALT2 TSL 1 (best) BASIC19.41■□□□□ 0.7
PDCD4Q53EL6 ALKAL2-204ENST00000403610 1389 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
PDCD4Q53EL6 HIBADH-201ENST00000265395 1990 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
PDCD4Q53EL6 KLF2-201ENST00000248071 2018 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
PDCD4Q53EL6 CASKIN1-201ENST00000343516 5759 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
PDCD4Q53EL6 NFE2L1-204ENST00000536222 2172 ntTSL 2 BASIC19.4■□□□□ 0.7
PDCD4Q53EL6 PAIP1-201ENST00000306846 2782 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
PDCD4Q53EL6 USP48-201ENST00000308271 4595 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
PDCD4Q53EL6 AP3S1-201ENST00000316788 1730 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
PDCD4Q53EL6 GPR157-201ENST00000377411 5265 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
PDCD4Q53EL6 MTUS2-202ENST00000380808 1793 ntAPPRIS P3 TSL 1 (best) BASIC19.4■□□□□ 0.7
PDCD4Q53EL6 TMEM235-201ENST00000374946 2409 ntTSL 5 BASIC19.4■□□□□ 0.7
PDCD4Q53EL6 THOP1-202ENST00000395212 1877 ntTSL 2 BASIC19.4■□□□□ 0.7
PDCD4Q53EL6 MANBAL-202ENST00000373606 1208 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
PDCD4Q53EL6 NRL-201ENST00000396995 810 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
Retrieved 100 of 98,524 protein–RNA pairs in 29.7 ms