Protein–RNA interactions for Protein: Q12200

NCR1, NPC intracellular cholesterol transporter 1-related protein 1, yeastyeast

Predictions only

Length 1,170 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
NCR1Q12200 STE11YLR362W 2154 nt4.11□□□□□ -1.75
NCR1Q12200 URB2YJR041C 3525 nt4.11□□□□□ -1.75
NCR1Q12200 VPH1YOR270C 2523 nt4.11□□□□□ -1.75
NCR1Q12200 HMG1YML075C 3165 nt4.1□□□□□ -1.75
NCR1Q12200 RLI1YDR091C 1827 nt4.1□□□□□ -1.75
NCR1Q12200 YBL071C-BYBL071C-B 99 nt4.1□□□□□ -1.75
NCR1Q12200 UTP14YML093W 2700 nt4.1□□□□□ -1.75
NCR1Q12200 GIS1YDR096W 2685 nt4.09□□□□□ -1.75
NCR1Q12200 COP1YDL145C 3606 nt4.09□□□□□ -1.75
NCR1Q12200 GLG1YKR058W 1851 nt4.09□□□□□ -1.75
NCR1Q12200 NPR1YNL183C 2373 nt4.09□□□□□ -1.75
NCR1Q12200 RPB2YOR151C 3675 nt4.09□□□□□ -1.75
NCR1Q12200 RSC1YGR056W 2787 nt4.09□□□□□ -1.75
NCR1Q12200 YCR043CYCR043C 384 nt4.08□□□□□ -1.76
NCR1Q12200 YBR141W-AYBR141W-A 96 nt4.08□□□□□ -1.76
NCR1Q12200 ATG2YNL242W 4779 nt4.08□□□□□ -1.76
NCR1Q12200 PFF1YBR074W 2931 nt4.08□□□□□ -1.76
NCR1Q12200 ARO80YDR421W 2853 nt4.08□□□□□ -1.76
NCR1Q12200 SIP3YNL257C 3690 nt4.07□□□□□ -1.76
NCR1Q12200 DUF1YOL087C 3351 nt4.07□□□□□ -1.76
NCR1Q12200 RPS25BYLR333C 327 nt4.07□□□□□ -1.76
NCR1Q12200 RFX1YLR176C 2436 nt4.07□□□□□ -1.76
NCR1Q12200 BCH1YMR237W 2175 nt4.07□□□□□ -1.76
NCR1Q12200 PSO2YMR137C 1986 nt4.07□□□□□ -1.76
NCR1Q12200 SOK1YDR006C 2706 nt4.07□□□□□ -1.76
NCR1Q12200 GIS4YML006C 2325 nt4.06□□□□□ -1.76
NCR1Q12200 PRP5YBR237W 2550 nt4.06□□□□□ -1.76
NCR1Q12200 NOG1YPL093W 1944 nt4.06□□□□□ -1.76
NCR1Q12200 VMA9YCL005W-A 222 nt4.06□□□□□ -1.76
NCR1Q12200 SMY2YBR172C 2223 nt4.06□□□□□ -1.76
NCR1Q12200 SLM1YIL105C 2061 nt4.06□□□□□ -1.76
NCR1Q12200 EDS1YBR033W 2760 nt4.05□□□□□ -1.76
NCR1Q12200 QCR9YGR183C 201 nt4.05□□□□□ -1.76
NCR1Q12200 LOS1YKL205W 3303 nt4.05□□□□□ -1.76
NCR1Q12200 MSC6YOR354C 2079 nt4.05□□□□□ -1.76
NCR1Q12200 SPT23YKL020C 3249 nt4.05□□□□□ -1.76
NCR1Q12200 ISM1YPL040C 3009 nt4.04□□□□□ -1.76
NCR1Q12200 HSH155YMR288W 2916 nt4.04□□□□□ -1.76
NCR1Q12200 APC11YDL008W 498 nt4.04□□□□□ -1.76
NCR1Q12200 JEN1YKL217W 1851 nt4.04□□□□□ -1.76
NCR1Q12200 UBP1YDL122W 2430 nt4.04□□□□□ -1.76
NCR1Q12200 IOC2YLR095C 2439 nt4.03□□□□□ -1.76
NCR1Q12200 RSN1YMR266W 2862 nt4.03□□□□□ -1.76
NCR1Q12200 YBL012CYBL012C 402 nt4.03□□□□□ -1.76
NCR1Q12200 RTC6YPL183W-A 282 nt4.03□□□□□ -1.76
NCR1Q12200 YJL070CYJL070C 2667 nt4.03□□□□□ -1.76
NCR1Q12200 IRC8YJL051W 2469 nt4.02□□□□□ -1.77
NCR1Q12200 MIS1YBR084W 2928 nt4.02□□□□□ -1.77
NCR1Q12200 CHD1YER164W 4407 nt4.02□□□□□ -1.77
NCR1Q12200 DIP2YLR129W 2832 nt4.02□□□□□ -1.77
NCR1Q12200 YCR038W-AYCR038W-A 126 nt4.02□□□□□ -1.77
NCR1Q12200 YBL100W-CYBL100W-C 120 nt4.02□□□□□ -1.77
NCR1Q12200 RPS30BYOR182C 192 nt4.02□□□□□ -1.77
NCR1Q12200 GPI13YLL031C 3054 nt4.01□□□□□ -1.77
NCR1Q12200 FAT1YBR041W 2010 nt4.01□□□□□ -1.77
NCR1Q12200 YGR240C-AYGR240C-A 201 nt4.01□□□□□ -1.77
NCR1Q12200 YGL140CYGL140C 3660 nt4.01□□□□□ -1.77
NCR1Q12200 VPS34YLR240W 2628 nt4.01□□□□□ -1.77
NCR1Q12200 PXA2YKL188C 2562 nt4.01□□□□□ -1.77
NCR1Q12200 YLR149CYLR149C 2193 nt4□□□□□ -1.77
NCR1Q12200 ULS1YOR191W 4860 nt4□□□□□ -1.77
NCR1Q12200 ZDS1YMR273C 2748 nt4□□□□□ -1.77
NCR1Q12200 SWC7YLR385C 399 nt4□□□□□ -1.77
NCR1Q12200 YBR072C-AYBR072C-A 162 nt4□□□□□ -1.77
NCR1Q12200 HMI1YOL095C 2121 nt4□□□□□ -1.77
NCR1Q12200 NUP133YKR082W 3474 nt3.99□□□□□ -1.77
NCR1Q12200 YGL063C-AYGL063C-A 150 nt3.99□□□□□ -1.77
NCR1Q12200 YGL182CYGL182C 324 nt3.99□□□□□ -1.77
NCR1Q12200 snR39BsnR39B 96 nt3.99□□□□□ -1.77
NCR1Q12200 YFR016CYFR016C 3702 nt3.98□□□□□ -1.77
NCR1Q12200 MSD1YPL104W 1977 nt3.98□□□□□ -1.77
NCR1Q12200 YLR146W-AYLR146W-A 189 nt3.98□□□□□ -1.77
NCR1Q12200 YLR149C-AYLR149C-A 87 nt3.98□□□□□ -1.77
NCR1Q12200 TCB3YML072C 4638 nt3.97□□□□□ -1.77
NCR1Q12200 YKL050CYKL050C 2769 nt3.97□□□□□ -1.77
NCR1Q12200 SGM1YJR134C 2124 nt3.97□□□□□ -1.77
NCR1Q12200 IMH1YLR309C 2736 nt3.96□□□□□ -1.78
NCR1Q12200 SMT3YDR510W 306 nt3.96□□□□□ -1.78
NCR1Q12200 KRE5YOR336W 4098 nt3.96□□□□□ -1.78
NCR1Q12200 PIP2YOR363C 2991 nt3.96□□□□□ -1.78
NCR1Q12200 GRR1YJR090C 3456 nt3.95□□□□□ -1.78
NCR1Q12200 MLH2YLR035C 2088 nt3.95□□□□□ -1.78
NCR1Q12200 RPL42AYNL162W 321 nt3.95□□□□□ -1.78
NCR1Q12200 NAT1YDL040C 2565 nt3.95□□□□□ -1.78
NCR1Q12200 RCY1YJL204C 2523 nt3.94□□□□□ -1.78
NCR1Q12200 YLL054CYLL054C 2532 nt3.94□□□□□ -1.78
NCR1Q12200 STB6YKL072W 2301 nt3.94□□□□□ -1.78
NCR1Q12200 COX12YLR038C 252 nt3.94□□□□□ -1.78
NCR1Q12200 YML002WYML002W 2214 nt3.94□□□□□ -1.78
NCR1Q12200 YGR027W-BYGR027W-B 5268 nt3.93□□□□□ -1.78
NCR1Q12200 YLR227W-BYLR227W-B 5268 nt3.93□□□□□ -1.78
NCR1Q12200 YPR158C-DYPR158C-D 5268 nt3.93□□□□□ -1.78
NCR1Q12200 RAD34YDR314C 2079 nt3.93□□□□□ -1.78
NCR1Q12200 MSH2YOL090W 2895 nt3.93□□□□□ -1.78
NCR1Q12200 YIL080WYIL080W 4722 nt3.93□□□□□ -1.78
NCR1Q12200 RDS1YCR106W 2499 nt3.93□□□□□ -1.78
NCR1Q12200 DIA2YOR080W 2199 nt3.92□□□□□ -1.78
NCR1Q12200 SNF5YBR289W 2718 nt3.92□□□□□ -1.78
NCR1Q12200 YGR051CYGR051C 324 nt3.91□□□□□ -1.78
NCR1Q12200 YOL164W-AYOL164W-A 183 nt3.91□□□□□ -1.78
Retrieved 100 of 7,029 protein–RNA pairs in 135.2 ms