Protein–RNA interactions for Protein: Q06406

LSM6, U6 snRNA-associated Sm-like protein LSm6, yeastyeast

Known RBP Predictions only

Length 86 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
LSM6Q06406 YJR071WYJR071W 369 nt0.24□□□□□ -2.37
LSM6Q06406 YML009C-AYML009C-A 327 nt0.24□□□□□ -2.37
LSM6Q06406 PET20YPL159C 762 nt0.24□□□□□ -2.37
LSM6Q06406 ATP15YPL271W 189 nt0.24□□□□□ -2.37
LSM6Q06406 YBR200W-AYBR200W-A 165 nt0.24□□□□□ -2.37
LSM6Q06406 YIL142C-AYIL142C-A 333 nt0.23□□□□□ -2.37
LSM6Q06406 PAM16YJL104W 450 nt0.23□□□□□ -2.37
LSM6Q06406 IES4YOR189W 351 nt0.23□□□□□ -2.37
LSM6Q06406 SET3YKR029C 2256 nt0.22□□□□□ -2.37
LSM6Q06406 YGR045CYGR045C 363 nt0.22□□□□□ -2.37
LSM6Q06406 RTT102YGR275W 474 nt0.22□□□□□ -2.37
LSM6Q06406 CRG1YHR209W 876 nt0.22□□□□□ -2.37
LSM6Q06406 BET4YJL031C 984 nt0.22□□□□□ -2.37
LSM6Q06406 YLR302CYLR302C 363 nt0.22□□□□□ -2.37
LSM6Q06406 YBL073WYBL073W 312 nt0.22□□□□□ -2.37
LSM6Q06406 BI3Q0115 1554 nt0.22□□□□□ -2.37
LSM6Q06406 PXA2YKL188C 2562 nt0.22□□□□□ -2.37
LSM6Q06406 PAN2YGL094C 3348 nt0.21□□□□□ -2.38
LSM6Q06406 YCR024C-BYCR024C-B 267 nt0.21□□□□□ -2.38
LSM6Q06406 NGG1YDR176W 2109 nt0.21□□□□□ -2.38
LSM6Q06406 CHZ1YER030W 462 nt0.21□□□□□ -2.38
LSM6Q06406 LSM4YER112W 564 nt0.21□□□□□ -2.38
LSM6Q06406 ALG13YGL047W 609 nt0.21□□□□□ -2.38
LSM6Q06406 GMC2YLR445W 567 nt0.21□□□□□ -2.38
LSM6Q06406 YMR175W-AYMR175W-A 195 nt0.21□□□□□ -2.38
LSM6Q06406 YNL171CYNL171C 369 nt0.21□□□□□ -2.38
LSM6Q06406 SLM6YBR266C 453 nt0.21□□□□□ -2.38
LSM6Q06406 YDR034C-CYDR034C-C 1317 nt0.2□□□□□ -2.38
LSM6Q06406 YFL002W-BYFL002W-B 1317 nt0.2□□□□□ -2.38
LSM6Q06406 YGR161W-AYGR161W-A 1317 nt0.2□□□□□ -2.38
LSM6Q06406 YLR410W-AYLR410W-A 1317 nt0.2□□□□□ -2.38
LSM6Q06406 YBL100W-AYBL100W-A 1317 nt0.2□□□□□ -2.38
LSM6Q06406 YOR192C-AYOR192C-A 1317 nt0.2□□□□□ -2.38
LSM6Q06406 YCL020WYCL020W 1317 nt0.2□□□□□ -2.38
LSM6Q06406 RTR2YDR066C 591 nt0.2□□□□□ -2.38
LSM6Q06406 YER087C-AYER087C-A 552 nt0.2□□□□□ -2.38
LSM6Q06406 YGL258W-AYGL258W-A 234 nt0.2□□□□□ -2.38
LSM6Q06406 YHR063W-AYHR063W-A 336 nt0.2□□□□□ -2.38
LSM6Q06406 NBP1YLR457C 960 nt0.2□□□□□ -2.38
LSM6Q06406 YOR199WYOR199W 330 nt0.2□□□□□ -2.38
LSM6Q06406 NUT2YPR168W 474 nt0.2□□□□□ -2.38
LSM6Q06406 DCP2YNL118C 2913 nt0.2□□□□□ -2.38
LSM6Q06406 SHE9YDR393W 1371 nt0.19□□□□□ -2.38
LSM6Q06406 NOC3YLR002C 1992 nt0.19□□□□□ -2.38
LSM6Q06406 NUT1YGL151W 3399 nt0.19□□□□□ -2.38
LSM6Q06406 SGD1YLR336C 2700 nt0.19□□□□□ -2.38
LSM6Q06406 AIM44YPL158C 2277 nt0.19□□□□□ -2.38
LSM6Q06406 YOR169CYOR169C 465 nt0.19□□□□□ -2.38
LSM6Q06406 snR24snR24 89 nt0.19□□□□□ -2.38
LSM6Q06406 STO1YMR125W 2586 nt0.19□□□□□ -2.38
LSM6Q06406 UBP3YER151C 2739 nt0.19□□□□□ -2.38
LSM6Q06406 UBC9YDL064W 474 nt0.18□□□□□ -2.38
LSM6Q06406 LSO2YGR169C-A 279 nt0.18□□□□□ -2.38
LSM6Q06406 RPL42BYHR141C 321 nt0.18□□□□□ -2.38
LSM6Q06406 URM1YIL008W 300 nt0.18□□□□□ -2.38
LSM6Q06406 ABF2YMR072W 552 nt0.18□□□□□ -2.38
LSM6Q06406 YMR324CYMR324C 243 nt0.18□□□□□ -2.38
LSM6Q06406 RPL42AYNL162W 321 nt0.18□□□□□ -2.38
LSM6Q06406 UFE1YOR075W 1041 nt0.18□□□□□ -2.38
LSM6Q06406 ICS2YBR157C 768 nt0.18□□□□□ -2.38
LSM6Q06406 FIG4YNL325C 2640 nt0.17□□□□□ -2.38
LSM6Q06406 YER023C-AYER023C-A 213 nt0.17□□□□□ -2.38
LSM6Q06406 PAU18YLL064C 363 nt0.17□□□□□ -2.38
LSM6Q06406 SPC2YML055W 537 nt0.17□□□□□ -2.38
LSM6Q06406 RPS16AYMR143W 432 nt0.17□□□□□ -2.38
LSM6Q06406 PAU6YNR076W 363 nt0.17□□□□□ -2.38
LSM6Q06406 SAG1YJR004C 1953 nt0.17□□□□□ -2.38
LSM6Q06406 DBP6YNR038W 1890 nt0.16□□□□□ -2.38
LSM6Q06406 YDR509WYDR509W 348 nt0.16□□□□□ -2.38
LSM6Q06406 EDC1YGL222C 528 nt0.16□□□□□ -2.38
LSM6Q06406 SAY1YGR263C 1275 nt0.16□□□□□ -2.38
LSM6Q06406 LCL2YLR104W 396 nt0.16□□□□□ -2.38
LSM6Q06406 YOL118CYOL118C 309 nt0.16□□□□□ -2.38
LSM6Q06406 YBR184WYBR184W 1572 nt0.15□□□□□ -2.38
LSM6Q06406 SRP14YDL092W 441 nt0.15□□□□□ -2.39
LSM6Q06406 OCA6YDR067C 675 nt0.15□□□□□ -2.39
LSM6Q06406 YPR170CYPR170C 336 nt0.15□□□□□ -2.39
LSM6Q06406 YEL010WYEL010W 351 nt0.14□□□□□ -2.39
LSM6Q06406 SNO3YFL060C 669 nt0.14□□□□□ -2.39
LSM6Q06406 SNO2YNL334C 669 nt0.14□□□□□ -2.39
LSM6Q06406 YPR147CYPR147C 915 nt0.14□□□□□ -2.39
LSM6Q06406 YAR009CYAR009C 3591 nt0.14□□□□□ -2.39
LSM6Q06406 PRP16YKR086W 3216 nt0.14□□□□□ -2.39
LSM6Q06406 REF2YDR195W 1602 nt0.13□□□□□ -2.39
LSM6Q06406 VPS74YDR372C 1038 nt0.13□□□□□ -2.39
LSM6Q06406 PAU12YGR294W 363 nt0.13□□□□□ -2.39
LSM6Q06406 YHR052W-AYHR052W-A 195 nt0.13□□□□□ -2.39
LSM6Q06406 YHR054W-AYHR054W-A 195 nt0.13□□□□□ -2.39
LSM6Q06406 YOR218CYOR218C 420 nt0.13□□□□□ -2.39
LSM6Q06406 KAR3YPR141C 2190 nt0.13□□□□□ -2.39
LSM6Q06406 MKT1YNL085W 2493 nt0.13□□□□□ -2.39
LSM6Q06406 VPS52YDR484W 1926 nt0.13□□□□□ -2.39
LSM6Q06406 BEM3YPL115C 3387 nt0.12□□□□□ -2.39
LSM6Q06406 PDE2YOR360C 1581 nt0.12□□□□□ -2.39
LSM6Q06406 HOT13YKL084W 351 nt0.12□□□□□ -2.39
LSM6Q06406 RUF22RUF22 515 nt0.12□□□□□ -2.39
LSM6Q06406 OST1YJL002C 1431 nt0.12□□□□□ -2.39
LSM6Q06406 FMP27YLR454W 7887 nt0.11□□□□□ -2.39
LSM6Q06406 IES5YER092W 378 nt0.11□□□□□ -2.39
LSM6Q06406 OST5YGL226C-A 261 nt0.11□□□□□ -2.39
Retrieved 100 of 7,029 protein–RNA pairs in 31.2 ms