Protein–RNA interactions for Protein: Q03834

MSH6, DNA mismatch repair protein MSH6, yeastyeast

Predictions only

Length 1,242 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
MSH6Q03834 LRE1YCL051W 1752 nt3.24□□□□□ -1.89
MSH6Q03834 RSN1YMR266W 2862 nt3.23□□□□□ -1.89
MSH6Q03834 snR76snR76 109 nt3.23□□□□□ -1.89
MSH6Q03834 YOR073W-AYOR073W-A 234 nt3.23□□□□□ -1.89
MSH6Q03834 YOR296WYOR296W 3870 nt3.22□□□□□ -1.89
MSH6Q03834 tC(GCA)BtC(GCA)B 72 nt3.22□□□□□ -1.89
MSH6Q03834 tC(GCA)GtC(GCA)G 72 nt3.22□□□□□ -1.89
MSH6Q03834 tC(GCA)P1tC(GCA)P1 72 nt3.22□□□□□ -1.89
MSH6Q03834 tC(GCA)P2tC(GCA)P2 72 nt3.22□□□□□ -1.89
MSH6Q03834 PRE4YFR050C 801 nt3.22□□□□□ -1.89
MSH6Q03834 RGM1YMR182C 636 nt3.22□□□□□ -1.89
MSH6Q03834 YOL019W-AYOL019W-A 153 nt3.22□□□□□ -1.89
MSH6Q03834 RRP12YPL012W 3687 nt3.22□□□□□ -1.89
MSH6Q03834 NAB3YPL190C 2409 nt3.22□□□□□ -1.89
MSH6Q03834 STE6YKL209C 3873 nt3.21□□□□□ -1.9
MSH6Q03834 TAF2YCR042C 4224 nt3.21□□□□□ -1.9
MSH6Q03834 SMD1YGR074W 441 nt3.21□□□□□ -1.9
MSH6Q03834 PHD1YKL043W 1101 nt3.21□□□□□ -1.9
MSH6Q03834 KSP1YHR082C 3090 nt3.2□□□□□ -1.9
MSH6Q03834 YGL217CYGL217C 342 nt3.2□□□□□ -1.9
MSH6Q03834 RRT15YLR162W-A 189 nt3.2□□□□□ -1.9
MSH6Q03834 YOR381W-AYOR381W-A 168 nt3.2□□□□□ -1.9
MSH6Q03834 NUT2YPR168W 474 nt3.2□□□□□ -1.9
MSH6Q03834 LCD1YDR499W 2244 nt3.2□□□□□ -1.9
MSH6Q03834 PTC5YOR090C 1719 nt3.19□□□□□ -1.9
MSH6Q03834 TMN3YER113C 2121 nt3.19□□□□□ -1.9
MSH6Q03834 DNL4YOR005C 2835 nt3.19□□□□□ -1.9
MSH6Q03834 tF(GAA)DtF(GAA)D 73 nt3.19□□□□□ -1.9
MSH6Q03834 tF(GAA)NtF(GAA)N 73 nt3.19□□□□□ -1.9
MSH6Q03834 YIL071W-AYIL071W-A 477 nt3.19□□□□□ -1.9
MSH6Q03834 VMA9YCL005W-A 222 nt3.19□□□□□ -1.9
MSH6Q03834 DYN1YKR054C 12279 nt3.19□□□□□ -1.9
MSH6Q03834 UBP11YKR098C 2154 nt3.19□□□□□ -1.9
MSH6Q03834 PEX8YGR077C 1770 nt3.18□□□□□ -1.9
MSH6Q03834 ERP6YGL002W 651 nt3.18□□□□□ -1.9
MSH6Q03834 RPS27BYHR021C 249 nt3.18□□□□□ -1.9
MSH6Q03834 SAK1YER129W 3429 nt3.18□□□□□ -1.9
MSH6Q03834 NET1YJL076W 3570 nt3.17□□□□□ -1.9
MSH6Q03834 YBT1YLL048C 4986 nt3.17□□□□□ -1.9
MSH6Q03834 ROG1YGL144C 2058 nt3.17□□□□□ -1.9
MSH6Q03834 YDR544CYDR544C 429 nt3.17□□□□□ -1.9
MSH6Q03834 tQ(UUG)BtQ(UUG)B 72 nt3.17□□□□□ -1.9
MSH6Q03834 YLR255CYLR255C 354 nt3.17□□□□□ -1.9
MSH6Q03834 YML037CYML037C 1023 nt3.17□□□□□ -1.9
MSH6Q03834 YPR002C-AYPR002C-A 198 nt3.17□□□□□ -1.9
MSH6Q03834 COS111YBR203W 2775 nt3.16□□□□□ -1.9
MSH6Q03834 YPR089WYPR089W 2667 nt3.16□□□□□ -1.9
MSH6Q03834 SSS1YDR086C 243 nt3.16□□□□□ -1.9
MSH6Q03834 TRX1YLR043C 312 nt3.16□□□□□ -1.9
MSH6Q03834 SNC2YOR327C 348 nt3.16□□□□□ -1.9
MSH6Q03834 CFT2YLR115W 2580 nt3.16□□□□□ -1.9
MSH6Q03834 FLO11YIR019C 4104 nt3.16□□□□□ -1.9
MSH6Q03834 PDE2YOR360C 1581 nt3.16□□□□□ -1.9
MSH6Q03834 CDC27YBL084C 2277 nt3.16□□□□□ -1.9
MSH6Q03834 VPS35YJL154C 2835 nt3.15□□□□□ -1.9
MSH6Q03834 EFR3YMR212C 2349 nt3.15□□□□□ -1.9
MSH6Q03834 VPH1YOR270C 2523 nt3.15□□□□□ -1.91
MSH6Q03834 YOR333CYOR333C 417 nt3.15□□□□□ -1.91
MSH6Q03834 YOR376WYOR376W 369 nt3.15□□□□□ -1.91
MSH6Q03834 BPT1YLL015W 4680 nt3.15□□□□□ -1.91
MSH6Q03834 YIL082W-AYIL082W-A 4497 nt3.14□□□□□ -1.91
MSH6Q03834 YHL005CYHL005C 393 nt3.14□□□□□ -1.91
MSH6Q03834 HSC82YMR186W 2118 nt3.14□□□□□ -1.91
MSH6Q03834 DBP10YDL031W 2988 nt3.14□□□□□ -1.91
MSH6Q03834 NUP120YKL057C 3114 nt3.13□□□□□ -1.91
MSH6Q03834 YLL007CYLL007C 1998 nt3.13□□□□□ -1.91
MSH6Q03834 APC9YLR102C 798 nt3.13□□□□□ -1.91
MSH6Q03834 DBP7YKR024C 2229 nt3.12□□□□□ -1.91
MSH6Q03834 INA22YIR024C 651 nt3.12□□□□□ -1.91
MSH6Q03834 DSE4YNR067C 3354 nt3.12□□□□□ -1.91
MSH6Q03834 KAP104YBR017C 2757 nt3.11□□□□□ -1.91
MSH6Q03834 YHR210CYHR210C 1026 nt3.11□□□□□ -1.91
MSH6Q03834 RGR1YLR071C 3249 nt3.11□□□□□ -1.91
MSH6Q03834 PRP42YDR235W 1635 nt3.11□□□□□ -1.91
MSH6Q03834 NOP53YPL146C 1368 nt3.11□□□□□ -1.91
MSH6Q03834 SSQ1YLR369W 1974 nt3.11□□□□□ -1.91
MSH6Q03834 SPT21YMR179W 2277 nt3.1□□□□□ -1.91
MSH6Q03834 YMR326CYMR326C 309 nt3.1□□□□□ -1.91
MSH6Q03834 YOR161W-BYOR161W-B 261 nt3.1□□□□□ -1.91
MSH6Q03834 YPR092WYPR092W 306 nt3.1□□□□□ -1.91
MSH6Q03834 YBR182C-AYBR182C-A 195 nt3.1□□□□□ -1.91
MSH6Q03834 snR52snR52 92 nt3.1□□□□□ -1.91
MSH6Q03834 UBP14YBR058C 2346 nt3.1□□□□□ -1.91
MSH6Q03834 YLR149CYLR149C 2193 nt3.1□□□□□ -1.91
MSH6Q03834 SEC5YDR166C 2916 nt3.09□□□□□ -1.91
MSH6Q03834 VPS34YLR240W 2628 nt3.09□□□□□ -1.91
MSH6Q03834 PRP6YBR055C 2700 nt3.09□□□□□ -1.91
MSH6Q03834 SNF5YBR289W 2718 nt3.09□□□□□ -1.91
MSH6Q03834 SEF1YBL066C 3447 nt3.09□□□□□ -1.92
MSH6Q03834 RGC1YPR115W 3252 nt3.08□□□□□ -1.92
MSH6Q03834 YDL247W-AYDL247W-A 75 nt3.08□□□□□ -1.92
MSH6Q03834 FMP16YDR070C 282 nt3.08□□□□□ -1.92
MSH6Q03834 TFB5YDR079C-A 219 nt3.08□□□□□ -1.92
MSH6Q03834 YDR286CYDR286C 345 nt3.08□□□□□ -1.92
MSH6Q03834 RPL6AYML073C 531 nt3.08□□□□□ -1.92
MSH6Q03834 YBR131C-AYBR131C-A 90 nt3.08□□□□□ -1.92
MSH6Q03834 PLC1YPL268W 2610 nt3.08□□□□□ -1.92
MSH6Q03834 VAS1YGR094W 3315 nt3.08□□□□□ -1.92
MSH6Q03834 YPL216WYPL216W 3309 nt3.08□□□□□ -1.92
MSH6Q03834 GRR1YJR090C 3456 nt3.08□□□□□ -1.92
Retrieved 100 of 7,029 protein–RNA pairs in 41.6 ms