Protein–RNA interactions for Protein: P61024

CKS1B, Cyclin-dependent kinases regulatory subunit 1, humanhuman

Predictions only

Length 79 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CKS1BP61024 E2F2-201ENST00000361729 5191 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
CKS1BP61024 ILF3-203ENST00000449870 6119 ntAPPRIS ALT2 TSL 1 (best) BASIC14.1□□□□□ -0.15
CKS1BP61024 KCTD20-202ENST00000373731 5619 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
CKS1BP61024 NTRK2-207ENST00000376214 5608 ntAPPRIS P3 TSL 5 BASIC14.1□□□□□ -0.15
CKS1BP61024 P3H4-201ENST00000355468 2791 ntAPPRIS P2 TSL 2 BASIC14.1□□□□□ -0.15
CKS1BP61024 JPT1-206ENST00000476258 2289 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
CKS1BP61024 MPV17L-201ENST00000287594 5820 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
CKS1BP61024 KCNH2-203ENST00000430723 2648 ntTSL 5 BASIC14.1□□□□□ -0.15
CKS1BP61024 NAXE-202ENST00000368234 901 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
CKS1BP61024 PEX5-204ENST00000412720 2105 ntTSL 2 BASIC14.1□□□□□ -0.15
CKS1BP61024 CDKN2A-208ENST00000498124 880 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
CKS1BP61024 UNC93B8-201ENST00000511903 705 ntBASIC14.1□□□□□ -0.15
CKS1BP61024 AP001267.3-203ENST00000554407 579 ntTSL 2 BASIC14.1□□□□□ -0.15
CKS1BP61024 MIR3181-201ENST00000578512 73 ntBASIC14.1□□□□□ -0.15
CKS1BP61024 BACE2-203ENST00000347667 8764 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
CKS1BP61024 CDC42EP3-201ENST00000295324 5700 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
CKS1BP61024 ZNF281-201ENST00000294740 4891 ntAPPRIS P3 TSL 1 (best) BASIC14.1□□□□□ -0.15
CKS1BP61024 LTBP3-202ENST00000322147 4046 ntAPPRIS P3 TSL 1 (best) BASIC14.1□□□□□ -0.15
CKS1BP61024 ICA1-201ENST00000265577 2309 ntAPPRIS ALT1 TSL 5 BASIC14.1□□□□□ -0.15
CKS1BP61024 WT1-210ENST00000639563 1494 ntAPPRIS ALT2 TSL 1 (best) BASIC14.1□□□□□ -0.15
CKS1BP61024 TRABD2A-201ENST00000335459 1844 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
CKS1BP61024 ARMC6-202ENST00000392335 2383 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
CKS1BP61024 NUDT10-202ENST00000376006 2001 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
CKS1BP61024 NFIC-211ENST00000641145 8399 ntBASIC14.1□□□□□ -0.15
CKS1BP61024 PKIG-206ENST00000372892 1338 ntAPPRIS P1 TSL 2 BASIC14.1□□□□□ -0.15
CKS1BP61024 CNIH3-201ENST00000272133 2558 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
CKS1BP61024 BLCAP-208ENST00000414542 2205 ntAPPRIS P1 TSL 3 BASIC14.1□□□□□ -0.15
CKS1BP61024 SEPT8-201ENST00000296873 4394 ntAPPRIS P2 TSL 1 (best) BASIC14.1□□□□□ -0.15
CKS1BP61024 VRK2-201ENST00000340157 1888 ntAPPRIS P3 TSL 1 (best) BASIC14.1□□□□□ -0.15
CKS1BP61024 GATM-206ENST00000558336 1522 ntTSL 2 BASIC14.1□□□□□ -0.15
CKS1BP61024 SUMF2-208ENST00000434526 2052 ntAPPRIS P3 TSL 1 (best) BASIC14.1□□□□□ -0.15
CKS1BP61024 LRR1-201ENST00000298288 1745 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
CKS1BP61024 LRP5L-203ENST00000444995 1714 ntAPPRIS ALT2 TSL 5 BASIC14.1□□□□□ -0.15
CKS1BP61024 ACBD3-201ENST00000366812 3573 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
CKS1BP61024 NNT-AS1-206ENST00000606697 1945 ntTSL 2 BASIC14.09□□□□□ -0.15
CKS1BP61024 ACSL1-205ENST00000504900 1583 ntTSL 5 BASIC14.09□□□□□ -0.15
CKS1BP61024 ZNF419-201ENST00000221735 2309 ntAPPRIS ALT2 TSL 1 (best) BASIC14.09□□□□□ -0.15
CKS1BP61024 TMEM17-201ENST00000335390 1797 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
CKS1BP61024 AL049796.1-201ENST00000565336 1766 ntBASIC14.09□□□□□ -0.15
CKS1BP61024 TPCN2-201ENST00000294309 2931 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
CKS1BP61024 UVSSA-207ENST00000511216 2927 ntAPPRIS P2 TSL 1 (best) BASIC14.09□□□□□ -0.15
CKS1BP61024 ZNF668-207ENST00000535577 2396 ntAPPRIS P1 TSL 5 BASIC14.09□□□□□ -0.15
CKS1BP61024 ADGRB2-201ENST00000373655 5400 ntAPPRIS P4 TSL 1 (best) BASIC14.09□□□□□ -0.15
CKS1BP61024 TNIP1-205ENST00000518977 2200 ntAPPRIS ALT2 TSL 1 (best) BASIC14.09□□□□□ -0.15
CKS1BP61024 TMEM110-201ENST00000355083 4769 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
CKS1BP61024 PNMT-201ENST00000269582 1253 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
CKS1BP61024 FDX2-202ENST00000393708 1012 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
CKS1BP61024 ACOT1-202ENST00000557556 1271 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
CKS1BP61024 AC091982.4-201ENST00000623943 726 ntTSL 2 BASIC14.09□□□□□ -0.15
CKS1BP61024 AP004607.7-201ENST00000527152 1677 ntBASIC14.09□□□□□ -0.15
CKS1BP61024 AC009014.1-201ENST00000607574 1667 ntAPPRIS P1 BASIC14.09□□□□□ -0.15
CKS1BP61024 CAMK2B-216ENST00000440254 2097 ntAPPRIS P4 TSL 1 (best) BASIC14.09□□□□□ -0.15
CKS1BP61024 ZNF582-202ENST00000586929 2053 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
CKS1BP61024 OLIG2-201ENST00000333337 3262 ntAPPRIS P1 BASIC14.09□□□□□ -0.15
CKS1BP61024 DGKI-203ENST00000446122 4070 ntAPPRIS ALT2 TSL 5 BASIC14.09□□□□□ -0.15
CKS1BP61024 ADAM23-201ENST00000264377 6330 ntAPPRIS P2 TSL 1 (best) BASIC14.09□□□□□ -0.15
CKS1BP61024 PIP5K1C-205ENST00000589578 2933 ntAPPRIS ALT2 TSL 1 (best) BASIC14.09□□□□□ -0.15
CKS1BP61024 HLA-C-201ENST00000376228 1536 ntAPPRIS P2 BASIC14.09□□□□□ -0.15
CKS1BP61024 ACOT2-201ENST00000238651 1774 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
CKS1BP61024 ASGR1-208ENST00000574388 1552 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
CKS1BP61024 AKR7A2-201ENST00000235835 1362 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
CKS1BP61024 AF117829.1-201ENST00000519655 1398 ntTSL 5 BASIC14.09□□□□□ -0.15
CKS1BP61024 CA9-204ENST00000617161 1374 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
CKS1BP61024 KDSR-202ENST00000406396 5447 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.15
CKS1BP61024 USP39-203ENST00000409470 2034 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.15
CKS1BP61024 BRMS1L-201ENST00000216807 2657 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.15
CKS1BP61024 DGKI-202ENST00000424189 4163 ntAPPRIS ALT2 TSL 5 BASIC14.08□□□□□ -0.15
CKS1BP61024 HTR7P1-202ENST00000624664 4411 ntBASIC14.08□□□□□ -0.15
CKS1BP61024 UBE3A-201ENST00000232165 5051 ntAPPRIS P3 TSL 5 BASIC14.08□□□□□ -0.15
CKS1BP61024 TIMM50-201ENST00000314349 1612 ntAPPRIS P2 TSL 1 (best) BASIC14.08□□□□□ -0.15
CKS1BP61024 HGNC:18790-203ENST00000433139 2254 ntAPPRIS P1 TSL 2 BASIC14.08□□□□□ -0.15
CKS1BP61024 GLIPR2-203ENST00000396613 1917 ntTSL 4 BASIC14.08□□□□□ -0.16
CKS1BP61024 MAN2A1-201ENST00000261483 4667 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
CKS1BP61024 MGLL-204ENST00000434178 4941 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
CKS1BP61024 QPCT-201ENST00000338415 1739 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
CKS1BP61024 NR2F2-204ENST00000453270 1712 ntTSL 1 (best) BASIC14.08□□□□□ -0.16
CKS1BP61024 HMGXB3-201ENST00000502717 4974 ntAPPRIS P2 TSL 1 (best) BASIC14.08□□□□□ -0.16
CKS1BP61024 CREM-229ENST00000474362 1030 ntTSL 2 BASIC14.08□□□□□ -0.16
CKS1BP61024 Z97653.1-201ENST00000567096 446 ntTSL 3 BASIC14.08□□□□□ -0.16
CKS1BP61024 PRSS21-201ENST00000005995 1101 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
CKS1BP61024 TMEM80-207ENST00000608174 800 ntTSL 5 BASIC14.08□□□□□ -0.16
CKS1BP61024 SLC16A10-206ENST00000612036 1231 ntTSL 5 BASIC14.08□□□□□ -0.16
CKS1BP61024 IRF7-205ENST00000397574 1968 ntAPPRIS ALT2 TSL 1 (best) BASIC14.08□□□□□ -0.16
CKS1BP61024 SLC39A5-209ENST00000454355 1968 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
CKS1BP61024 HPCAL1-201ENST00000307845 1751 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
CKS1BP61024 P2RX4-202ENST00000337233 2032 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
CKS1BP61024 AC020763.4-201ENST00000623414 4170 ntBASIC14.08□□□□□ -0.16
CKS1BP61024 LINC01006-201ENST00000333319 2292 ntBASIC14.08□□□□□ -0.16
CKS1BP61024 RSAD1-201ENST00000258955 2528 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
CKS1BP61024 MCCC1-201ENST00000265594 2545 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
CKS1BP61024 C2CD4B-201ENST00000380392 1579 ntAPPRIS P1 TSL 2 BASIC14.08□□□□□ -0.16
CKS1BP61024 KIF5C-201ENST00000435030 6931 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
CKS1BP61024 HTRA4-201ENST00000302495 2095 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
CKS1BP61024 MAP3K6-207ENST00000493901 4309 ntAPPRIS P1 TSL 5 BASIC14.08□□□□□ -0.16
CKS1BP61024 BASP1-201ENST00000322611 1878 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
CKS1BP61024 IDUA-201ENST00000247933 2163 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
CKS1BP61024 MSLN-202ENST00000545450 2162 ntAPPRIS ALT2 TSL 1 (best) BASIC14.07□□□□□ -0.16
CKS1BP61024 RASSF1-203ENST00000359365 1923 ntAPPRIS ALT1 TSL 1 (best) BASIC14.07□□□□□ -0.16
CKS1BP61024 NAE1-203ENST00000379463 1909 ntTSL 2 BASIC14.07□□□□□ -0.16
CKS1BP61024 WWOX-214ENST00000566780 2482 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Retrieved 100 of 98,524 protein–RNA pairs in 18 ms