Protein–RNA interactions for Protein: P55854

SUMO3, Small ubiquitin-related modifier 3, humanhuman

Predicted RBP Predictions only

Length 103 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SUMO3P55854 P2RY11-201ENST00000321826 1943 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
SUMO3P55854 HABP4-201ENST00000375249 2615 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
SUMO3P55854 FOXI1-202ENST00000449804 2011 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
SUMO3P55854 MTAP-204ENST00000460874 1434 ntTSL 2 BASIC18.38■□□□□ 0.53
SUMO3P55854 ST8SIA2-201ENST00000268164 5708 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
SUMO3P55854 DYRK3-202ENST00000367108 2218 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
SUMO3P55854 GRM6-201ENST00000231188 6143 ntAPPRIS P1 TSL 2 BASIC18.38■□□□□ 0.53
SUMO3P55854 MFSD10-206ENST00000508221 1639 ntTSL 5 BASIC18.38■□□□□ 0.53
SUMO3P55854 FGFRL1-203ENST00000504138 1663 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
SUMO3P55854 TACC3-213ENST00000617535 1693 ntTSL 5 BASIC18.38■□□□□ 0.53
SUMO3P55854 AVPR2-202ENST00000358927 1763 ntAPPRIS P1 TSL 5 BASIC18.37■□□□□ 0.53
SUMO3P55854 WNT10B-202ENST00000403957 1817 ntTSL 5 BASIC18.37■□□□□ 0.53
SUMO3P55854 FMR1-204ENST00000370471 4125 ntTSL 5 BASIC18.37■□□□□ 0.53
SUMO3P55854 CCDC103-202ENST00000410006 921 ntAPPRIS P1 TSL 2 BASIC18.37■□□□□ 0.53
SUMO3P55854 PACRGL-206ENST00000502374 1034 ntTSL 2 BASIC18.37■□□□□ 0.53
SUMO3P55854 CTBP1-AS2-203ENST00000507044 739 ntTSL 3 BASIC18.37■□□□□ 0.53
SUMO3P55854 ANAPC11-219ENST00000583839 499 ntAPPRIS P1 TSL 2 BASIC18.37■□□□□ 0.53
SUMO3P55854 AC104771.1-201ENST00000603335 964 ntBASIC18.37■□□□□ 0.53
SUMO3P55854 KEAP1-202ENST00000393623 2648 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
SUMO3P55854 ARHGEF7-202ENST00000317133 4361 ntAPPRIS ALT2 TSL 1 (best) BASIC18.37■□□□□ 0.53
SUMO3P55854 CTDP1-208ENST00000613122 5866 ntAPPRIS P3 TSL 1 (best) BASIC18.37■□□□□ 0.53
SUMO3P55854 FGF17-202ENST00000518533 1706 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
SUMO3P55854 SPATA22-210ENST00000573128 1704 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
SUMO3P55854 RNH1-202ENST00000356187 1791 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
SUMO3P55854 HMOX1-201ENST00000216117 1822 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
SUMO3P55854 ACBD4-201ENST00000321854 1806 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
SUMO3P55854 SPON2-201ENST00000290902 1869 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
SUMO3P55854 PCMT1-205ENST00000464889 1984 ntAPPRIS P3 TSL 1 (best) BASIC18.37■□□□□ 0.53
SUMO3P55854 DISC1-213ENST00000537876 2349 ntAPPRIS ALT2 TSL 2 BASIC18.37■□□□□ 0.53
SUMO3P55854 CNNM4-201ENST00000377075 4800 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
SUMO3P55854 D2HGDH-201ENST00000321264 2617 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
SUMO3P55854 KCNK12-201ENST00000327876 6227 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
SUMO3P55854 FN3K-201ENST00000300784 1434 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
SUMO3P55854 NF2-201ENST00000334961 2020 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
SUMO3P55854 FBLN5-202ENST00000342058 2123 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
SUMO3P55854 UBE2C-203ENST00000352551 665 ntTSL 2 BASIC18.36■□□□□ 0.53
SUMO3P55854 WDR37-203ENST00000381329 1307 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
SUMO3P55854 ME3-202ENST00000393324 2240 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
SUMO3P55854 EMC6-202ENST00000397133 762 ntAPPRIS P1 TSL 2 BASIC18.36■□□□□ 0.53
SUMO3P55854 DPP3P2-201ENST00000416030 1696 ntBASIC18.36■□□□□ 0.53
SUMO3P55854 SLAIN1-206ENST00000418532 2855 ntAPPRIS ALT2 TSL 5 BASIC18.36■□□□□ 0.53
SUMO3P55854 GNAS-AS1-201ENST00000424094 1156 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
SUMO3P55854 ZNF497-202ENST00000425453 2261 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
SUMO3P55854 AC073210.2-201ENST00000430369 194 ntBASIC18.36■□□□□ 0.53
SUMO3P55854 ANKRD65-202ENST00000442470 876 ntTSL 2 BASIC18.36■□□□□ 0.53
SUMO3P55854 DNAJC7-203ENST00000457167 2022 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
SUMO3P55854 SUN1-220ENST00000457378 1309 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
SUMO3P55854 RRAS2-203ENST00000526063 970 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
SUMO3P55854 RRAS2-208ENST00000532814 982 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
SUMO3P55854 NTRK3-206ENST00000540489 2145 ntTSL 5 BASIC18.36■□□□□ 0.53
SUMO3P55854 TSPAN3-207ENST00000559494 1326 ntTSL 5 BASIC18.36■□□□□ 0.53
SUMO3P55854 DET1-207ENST00000564406 2315 ntTSL 2 BASIC18.36■□□□□ 0.53
SUMO3P55854 PAQR4-205ENST00000576565 842 ntTSL 2 BASIC18.36■□□□□ 0.53
SUMO3P55854 MAGIX-202ENST00000595224 1238 ntAPPRIS P2 TSL 5 BASIC18.36■□□□□ 0.53
SUMO3P55854 MGAT4B-201ENST00000292591 2446 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
SUMO3P55854 SLC22A17-202ENST00000354772 2238 ntAPPRIS ALT2 TSL 1 (best) BASIC18.35■□□□□ 0.53
SUMO3P55854 AC005224.2-201ENST00000571192 1885 ntTSL 2 BASIC18.35■□□□□ 0.53
SUMO3P55854 AC007249.2-201ENST00000553181 1737 ntTSL 5 BASIC18.35■□□□□ 0.53
SUMO3P55854 GRIN1-208ENST00000371561 5149 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
SUMO3P55854 TEX45-201ENST00000361664 1679 ntAPPRIS P2 TSL 1 (best) BASIC18.35■□□□□ 0.53
SUMO3P55854 PADI2-201ENST00000375481 1607 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
SUMO3P55854 SETD6-201ENST00000219315 1553 ntAPPRIS ALT2 TSL 1 (best) BASIC18.35■□□□□ 0.53
SUMO3P55854 FUZ-212ENST00000528094 1479 ntTSL 2 BASIC18.35■□□□□ 0.53
SUMO3P55854 ATG101-201ENST00000336854 1439 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
SUMO3P55854 WIPF1-207ENST00000410117 777 ntTSL 3 BASIC18.35■□□□□ 0.53
SUMO3P55854 PPP1R14BP2-201ENST00000426284 444 ntBASIC18.35■□□□□ 0.53
SUMO3P55854 AC142086.2-201ENST00000569753 217 ntBASIC18.35■□□□□ 0.53
SUMO3P55854 GNAO1-211ENST00000570235 568 ntTSL 2 BASIC18.35■□□□□ 0.53
SUMO3P55854 RIPPLY3-201ENST00000329553 2235 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
SUMO3P55854 AL606970.3-201ENST00000446811 2246 ntTSL 2 BASIC18.35■□□□□ 0.53
SUMO3P55854 ACHE-207ENST00000428317 2159 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
SUMO3P55854 SLC16A3-201ENST00000392339 2074 ntAPPRIS P1 TSL 5 BASIC18.35■□□□□ 0.53
SUMO3P55854 SLC16A3-202ENST00000392341 2086 ntAPPRIS P1 TSL 5 BASIC18.35■□□□□ 0.53
SUMO3P55854 KREMEN2-202ENST00000319500 1882 ntAPPRIS ALT2 TSL 1 (best) BASIC18.35■□□□□ 0.53
SUMO3P55854 NTN5-201ENST00000270235 1836 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
SUMO3P55854 WASH6P-203ENST00000460206 1826 ntTSL 5 BASIC18.35■□□□□ 0.53
SUMO3P55854 ZNF664-207ENST00000539644 5108 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
SUMO3P55854 FAM76A-205ENST00000419687 1661 ntTSL 2 BASIC18.34■□□□□ 0.53
SUMO3P55854 RFXANK-201ENST00000303088 1407 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
SUMO3P55854 SPESP1-201ENST00000310673 1431 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
SUMO3P55854 AC074212.1-201ENST00000559756 1402 ntTSL 3 BASIC18.34■□□□□ 0.53
SUMO3P55854 KLHDC1-201ENST00000359332 2691 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
SUMO3P55854 SUMO3-204ENST00000411651 1921 ntTSL 2 BASIC18.34■□□□□ 0.53
SUMO3P55854 XXYLT1-202ENST00000356740 564 ntTSL 2 BASIC18.34■□□□□ 0.53
SUMO3P55854 NXNL2-201ENST00000375854 805 ntAPPRIS P1 TSL 5 BASIC18.34■□□□□ 0.53
SUMO3P55854 ID1-201ENST00000376105 1233 ntBASIC18.34■□□□□ 0.53
SUMO3P55854 DUSP5P2-201ENST00000426873 1033 ntBASIC18.34■□□□□ 0.53
SUMO3P55854 AC091874.3-201ENST00000512672 1195 ntBASIC18.34■□□□□ 0.53
SUMO3P55854 AC007216.1-201ENST00000570197 601 ntTSL 4 BASIC18.34■□□□□ 0.53
SUMO3P55854 GAMT-205ENST00000640762 751 ntTSL 5 BASIC18.34■□□□□ 0.53
SUMO3P55854 OTUB1-210ENST00000541478 1803 ntTSL 5 BASIC18.34■□□□□ 0.53
SUMO3P55854 NXN-201ENST00000336868 3036 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
SUMO3P55854 ZDHHC5-204ENST00000527985 2817 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
SUMO3P55854 DXO-202ENST00000375349 1667 ntAPPRIS P1 TSL 5 BASIC18.34■□□□□ 0.53
SUMO3P55854 MKRN1-208ENST00000474576 1661 ntTSL 5 BASIC18.34■□□□□ 0.53
SUMO3P55854 GNA15-201ENST00000262958 2133 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
SUMO3P55854 EGFR-204ENST00000420316 1570 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
SUMO3P55854 COL23A1-201ENST00000390654 3061 ntAPPRIS P2 TSL 5 BASIC18.34■□□□□ 0.53
SUMO3P55854 ATP9A-202ENST00000338821 8106 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.53
SUMO3P55854 SLC16A10-202ENST00000368851 2508 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.53
Retrieved 100 of 98,524 protein–RNA pairs in 32.9 ms