Protein–RNA interactions for Protein: P49238

CX3CR1, CX3C chemokine receptor 1, humanhuman

Predictions only

Length 355 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CX3CR1P49238 TTLL7-214ENST00000610996 2028 ntTSL 5 BASIC17.78■□□□□ 0.44
CX3CR1P49238 ATP6V0B-205ENST00000472174 1298 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
CX3CR1P49238 FBXL12-203ENST00000586073 582 ntTSL 2 BASIC17.78■□□□□ 0.44
CX3CR1P49238 HAS1-203ENST00000594621 760 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
CX3CR1P49238 AP2S1-207ENST00000599990 829 ntAPPRIS ALT1 TSL 2 BASIC17.78■□□□□ 0.44
CX3CR1P49238 AC087623.3-201ENST00000607047 1098 ntBASIC17.78■□□□□ 0.44
CX3CR1P49238 H2AFB3-201ENST00000615853 591 ntAPPRIS P1 BASIC17.78■□□□□ 0.44
CX3CR1P49238 MIR6821-201ENST00000617625 74 ntBASIC17.78■□□□□ 0.44
CX3CR1P49238 PCDHB12-203ENST00000624949 1963 ntTSL 2 BASIC17.78■□□□□ 0.44
CX3CR1P49238 CASP9-210ENST00000546424 4463 ntAPPRIS ALT2 TSL 5 BASIC17.78■□□□□ 0.44
CX3CR1P49238 MEF2B-203ENST00000410050 1429 ntTSL 5 BASIC17.78■□□□□ 0.44
CX3CR1P49238 NEU4-205ENST00000407683 2273 ntAPPRIS P1 TSL 2 BASIC17.78■□□□□ 0.44
CX3CR1P49238 IDH1-205ENST00000446179 2298 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
CX3CR1P49238 PITPNB-205ENST00000455418 2963 ntAPPRIS ALT1 TSL 5 BASIC17.78■□□□□ 0.44
CX3CR1P49238 TSR1-201ENST00000301364 5188 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
CX3CR1P49238 AC007249.2-201ENST00000553181 1737 ntTSL 5 BASIC17.78■□□□□ 0.44
CX3CR1P49238 HDDC3-202ENST00000394272 1880 ntAPPRIS P1 TSL 2 BASIC17.78■□□□□ 0.44
CX3CR1P49238 SOCS2-206ENST00000549122 2391 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
CX3CR1P49238 ENPP7-201ENST00000328313 2043 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
CX3CR1P49238 ZMYND11-210ENST00000403354 1664 ntTSL 5 BASIC17.77■□□□□ 0.44
CX3CR1P49238 SLC25A22-228ENST00000628067 2692 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
CX3CR1P49238 ERLIN1-203ENST00000421367 5792 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
CX3CR1P49238 ADAMTS10-205ENST00000595838 2458 ntTSL 2 BASIC17.77■□□□□ 0.44
CX3CR1P49238 KCTD1-202ENST00000408011 2103 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
CX3CR1P49238 PLAGL1-207ENST00000417959 1645 ntTSL 1 (best) BASIC17.77■□□□□ 0.44
CX3CR1P49238 WDR90-201ENST00000293879 5488 ntAPPRIS P2 TSL 5 BASIC17.77■□□□□ 0.44
CX3CR1P49238 TMEM51-201ENST00000376008 1931 ntAPPRIS P1 TSL 2 BASIC17.77■□□□□ 0.44
CX3CR1P49238 IFI6-202ENST00000361157 841 ntAPPRIS ALT2 TSL 1 (best) BASIC17.77■□□□□ 0.44
CX3CR1P49238 MLLT10-204ENST00000377091 905 ntTSL 1 (best) BASIC17.77■□□□□ 0.44
CX3CR1P49238 SNRNP25-202ENST00000383018 1085 ntAPPRIS P2 TSL 1 (best) BASIC17.77■□□□□ 0.44
CX3CR1P49238 CCDC74B-205ENST00000409943 1296 ntAPPRIS ALT2 TSL 1 (best) BASIC17.77■□□□□ 0.44
CX3CR1P49238 SPOCK2-203ENST00000412663 1284 ntTSL 5 BASIC17.77■□□□□ 0.44
CX3CR1P49238 AC105001.1-201ENST00000506149 821 ntTSL 1 (best) BASIC17.77■□□□□ 0.44
CX3CR1P49238 AC068385.1-201ENST00000533218 409 ntTSL 3 BASIC17.77■□□□□ 0.44
CX3CR1P49238 FAM21FP-204ENST00000608637 956 ntBASIC17.77■□□□□ 0.44
CX3CR1P49238 PCDHAC2-203ENST00000615316 3011 ntBASIC17.77■□□□□ 0.44
CX3CR1P49238 ENTPD5-206ENST00000556242 1437 ntTSL 5 BASIC17.77■□□□□ 0.44
CX3CR1P49238 SEPT1-201ENST00000321367 1592 ntAPPRIS P1 TSL 5 BASIC17.77■□□□□ 0.44
CX3CR1P49238 FAM213A-202ENST00000372185 1723 ntTSL 2 BASIC17.77■□□□□ 0.44
CX3CR1P49238 MATK-215ENST00000619596 1740 ntAPPRIS P4 TSL 2 BASIC17.77■□□□□ 0.44
CX3CR1P49238 GNA14-201ENST00000341700 2482 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.43
CX3CR1P49238 CCDC74A-201ENST00000295171 1543 ntAPPRIS P3 TSL 1 (best) BASIC17.77■□□□□ 0.43
CX3CR1P49238 CCDC74B-201ENST00000310463 1549 ntAPPRIS P3 TSL 2 BASIC17.77■□□□□ 0.43
CX3CR1P49238 NTN5-201ENST00000270235 1836 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.43
CX3CR1P49238 CYP26A1-201ENST00000224356 2125 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.43
CX3CR1P49238 SIMC1-203ENST00000429602 2694 ntAPPRIS ALT2 TSL 1 (best) BASIC17.76■□□□□ 0.43
CX3CR1P49238 YIPF2-201ENST00000253031 2087 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
CX3CR1P49238 P2RY11-201ENST00000321826 1943 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
CX3CR1P49238 PGPEP1L-202ENST00000535714 1483 ntTSL 2 BASIC17.76■□□□□ 0.43
CX3CR1P49238 SPOCK3-204ENST00000502330 2180 ntAPPRIS ALT2 TSL 1 (best) BASIC17.76■□□□□ 0.43
CX3CR1P49238 USP39-204ENST00000409766 2033 ntTSL 2 BASIC17.76■□□□□ 0.43
CX3CR1P49238 ZNRF1-202ENST00000335325 4620 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
CX3CR1P49238 KREMEN2-202ENST00000319500 1882 ntAPPRIS ALT2 TSL 1 (best) BASIC17.76■□□□□ 0.43
CX3CR1P49238 AC069431.1-201ENST00000488882 1877 ntTSL 5 BASIC17.76■□□□□ 0.43
CX3CR1P49238 ZDHHC18-202ENST00000374142 5020 ntAPPRIS P2 TSL 1 (best) BASIC17.76■□□□□ 0.43
CX3CR1P49238 MARCH8-201ENST00000319836 5272 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
CX3CR1P49238 KRTAP5-AS1-201ENST00000424148 2265 ntTSL 2 BASIC17.76■□□□□ 0.43
CX3CR1P49238 NFKBIB-201ENST00000313582 1159 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
CX3CR1P49238 SAPCD2P1-201ENST00000395413 1184 ntBASIC17.76■□□□□ 0.43
CX3CR1P49238 CDKN3-204ENST00000442975 727 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
CX3CR1P49238 ALG5-202ENST00000443765 1119 ntTSL 2 BASIC17.76■□□□□ 0.43
CX3CR1P49238 BRI3-207ENST00000539286 699 ntTSL 2 BASIC17.76■□□□□ 0.43
CX3CR1P49238 DBI-210ENST00000542275 757 ntTSL 5 BASIC17.76■□□□□ 0.43
CX3CR1P49238 AC044860.1-203ENST00000560811 844 ntTSL 3 BASIC17.76■□□□□ 0.43
CX3CR1P49238 CSPG5-203ENST00000456150 2089 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
CX3CR1P49238 RASL12-201ENST00000220062 2640 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
CX3CR1P49238 ST3GAL5-202ENST00000377332 2165 ntTSL 5 BASIC17.76■□□□□ 0.43
CX3CR1P49238 MAP4K4-204ENST00000350198 7316 ntTSL 5 BASIC17.76■□□□□ 0.43
CX3CR1P49238 E4F1-201ENST00000301727 2573 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
CX3CR1P49238 NR1D2-201ENST00000312521 5258 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
CX3CR1P49238 TXNDC5-201ENST00000379757 2964 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
CX3CR1P49238 C19orf66-201ENST00000253110 2117 ntAPPRIS P3 TSL 2 BASIC17.75■□□□□ 0.43
CX3CR1P49238 CENPS-CORT-204ENST00000602296 1326 ntTSL 3 BASIC17.75■□□□□ 0.43
CX3CR1P49238 B4GALNT1-208ENST00000550764 1967 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
CX3CR1P49238 SH3BGRL3-201ENST00000270792 1661 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
CX3CR1P49238 DXO-202ENST00000375349 1667 ntAPPRIS P1 TSL 5 BASIC17.75■□□□□ 0.43
CX3CR1P49238 AC099778.1-201ENST00000568593 1911 ntBASIC17.75■□□□□ 0.43
CX3CR1P49238 TNFRSF18-202ENST00000379265 705 ntAPPRIS ALT2 TSL 1 (best) BASIC17.75■□□□□ 0.43
CX3CR1P49238 MPRIP-203ENST00000395806 527 ntTSL 3 BASIC17.75■□□□□ 0.43
CX3CR1P49238 MVB12A-212ENST00000543795 1154 ntAPPRIS P1 TSL 5 BASIC17.75■□□□□ 0.43
CX3CR1P49238 CIRBP-222ENST00000589235 1073 ntAPPRIS ALT1 TSL 2 BASIC17.75■□□□□ 0.43
CX3CR1P49238 AC010536.3-201ENST00000620306 533 ntBASIC17.75■□□□□ 0.43
CX3CR1P49238 AL133516.1-201ENST00000633012 540 ntTSL 5 BASIC17.75■□□□□ 0.43
CX3CR1P49238 SLC2A8-215ENST00000610552 1763 ntTSL 3 BASIC17.75■□□□□ 0.43
CX3CR1P49238 SOX8-201ENST00000293894 3049 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
CX3CR1P49238 DLGAP4-201ENST00000339266 5016 ntAPPRIS ALT2 TSL 5 BASIC17.75■□□□□ 0.43
CX3CR1P49238 MUS81-201ENST00000308110 2392 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
CX3CR1P49238 CHST8-203ENST00000438847 2133 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
CX3CR1P49238 ESR1-210ENST00000456483 1368 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
CX3CR1P49238 SMOC2-206ENST00000535039 1875 ntTSL 5 BASIC17.75■□□□□ 0.43
CX3CR1P49238 ZNF276-208ENST00000568064 2203 ntTSL 5 BASIC17.75■□□□□ 0.43
CX3CR1P49238 FDXR-204ENST00000442102 1967 ntTSL 2 BASIC17.75■□□□□ 0.43
CX3CR1P49238 SLC39A5-209ENST00000454355 1968 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
CX3CR1P49238 C3orf18-205ENST00000441239 1490 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
CX3CR1P49238 PCDHB12-202ENST00000622978 2093 ntTSL 2 BASIC17.75■□□□□ 0.43
CX3CR1P49238 AC112907.3-201ENST00000577781 2400 ntBASIC17.74■□□□□ 0.43
CX3CR1P49238 TRIP6-201ENST00000200457 1942 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
CX3CR1P49238 LRRC25-202ENST00000595840 1924 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
CX3CR1P49238 BYSL-201ENST00000230340 2029 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
CX3CR1P49238 NSMF-201ENST00000265663 2981 ntAPPRIS P3 TSL 1 (best) BASIC17.74■□□□□ 0.43
Retrieved 100 of 98,524 protein–RNA pairs in 39.1 ms