Protein–RNA interactions for Protein: P47171

HIR3, Histone transcription regulator 3, yeastyeast

Predictions only

Length 1,648 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
HIR3P47171 ARK1YNL020C 1917 nt-0.5□□□□□ -2.49
HIR3P47171 VPS25YJR102C 609 nt-0.5□□□□□ -2.49
HIR3P47171 YDR210W-AYDR210W-A 1317 nt-0.51□□□□□ -2.49
HIR3P47171 YOR343W-AYOR343W-A 1317 nt-0.51□□□□□ -2.49
HIR3P47171 YLR031WYLR031W 561 nt-0.51□□□□□ -2.49
HIR3P47171 snR191snR191 274 nt-0.51□□□□□ -2.49
HIR3P47171 IMP3YHR148W 552 nt-0.52□□□□□ -2.49
HIR3P47171 REV7YIL139C 738 nt-0.52□□□□□ -2.49
HIR3P47171 SRP21YKL122C 504 nt-0.52□□□□□ -2.49
HIR3P47171 YBR071WYBR071W 636 nt-0.52□□□□□ -2.49
HIR3P47171 ADF1YCL058W-A 342 nt-0.53□□□□□ -2.49
HIR3P47171 YPL035CYPL035C 348 nt-0.53□□□□□ -2.49
HIR3P47171 YBR206WYBR206W 324 nt-0.53□□□□□ -2.49
HIR3P47171 ALG13YGL047W 609 nt-0.54□□□□□ -2.5
HIR3P47171 YHR022CYHR022C 771 nt-0.54□□□□□ -2.5
HIR3P47171 YPL073CYPL073C 486 nt-0.54□□□□□ -2.5
HIR3P47171 DAS1YJL149W 1992 nt-0.54□□□□□ -2.5
HIR3P47171 RAD61YDR014W 1944 nt-0.55□□□□□ -2.5
HIR3P47171 FAR7YFR008W 666 nt-0.55□□□□□ -2.5
HIR3P47171 YGL118CYGL118C 438 nt-0.55□□□□□ -2.5
HIR3P47171 YBR200W-AYBR200W-A 165 nt-0.55□□□□□ -2.5
HIR3P47171 SEC10YLR166C 2616 nt-0.55□□□□□ -2.5
HIR3P47171 YDR210WYDR210W 228 nt-0.56□□□□□ -2.5
HIR3P47171 YDR262WYDR262W 819 nt-0.56□□□□□ -2.5
HIR3P47171 SBH2YER019C-A 267 nt-0.56□□□□□ -2.5
HIR3P47171 MIC19YFR011C 513 nt-0.56□□□□□ -2.5
HIR3P47171 GRX8YLR364W 330 nt-0.56□□□□□ -2.5
HIR3P47171 YDL187CYDL187C 330 nt-0.56□□□□□ -2.5
HIR3P47171 NTF2YER009W 378 nt-0.56□□□□□ -2.5
HIR3P47171 NGL1YOL042W 1092 nt-0.56□□□□□ -2.5
HIR3P47171 PRM6YML047C 1059 nt-0.57□□□□□ -2.5
HIR3P47171 ALG5YPL227C 1005 nt-0.57□□□□□ -2.5
HIR3P47171 MET32YDR253C 576 nt-0.58□□□□□ -2.5
HIR3P47171 LRS4YDR439W 1044 nt-0.58□□□□□ -2.5
HIR3P47171 SBH1YER087C-B 249 nt-0.58□□□□□ -2.5
HIR3P47171 TRM12YML005W 1389 nt-0.58□□□□□ -2.5
HIR3P47171 RSM28YDR494W 1086 nt-0.59□□□□□ -2.5
HIR3P47171 TRS20YBR254C 528 nt-0.59□□□□□ -2.5
HIR3P47171 YPL197CYPL197C 414 nt-0.6□□□□□ -2.5
HIR3P47171 RPB5YBR154C 648 nt-0.6□□□□□ -2.5
HIR3P47171 MDM36YPR083W 1740 nt-0.6□□□□□ -2.51
HIR3P47171 snR63snR63 255 nt-0.6□□□□□ -2.51
HIR3P47171 RAD6YGL058W 519 nt-0.6□□□□□ -2.51
HIR3P47171 YGL217CYGL217C 342 nt-0.6□□□□□ -2.51
HIR3P47171 YGR045CYGR045C 363 nt-0.61□□□□□ -2.51
HIR3P47171 YJR071WYJR071W 369 nt-0.61□□□□□ -2.51
HIR3P47171 CCE1YKL011C 1062 nt-0.61□□□□□ -2.51
HIR3P47171 MED11YMR112C 396 nt-0.62□□□□□ -2.51
HIR3P47171 RPL9BYNL067W 576 nt-0.62□□□□□ -2.51
HIR3P47171 AIM44YPL158C 2277 nt-0.62□□□□□ -2.51
HIR3P47171 COBQ0105 1158 nt-0.63□□□□□ -2.51
HIR3P47171 YBR012CYBR012C 420 nt-0.63□□□□□ -2.51
HIR3P47171 NUT2YPR168W 474 nt-0.63□□□□□ -2.51
HIR3P47171 PRP42YDR235W 1635 nt-0.63□□□□□ -2.51
HIR3P47171 OSH6YKR003W 1347 nt-0.63□□□□□ -2.51
HIR3P47171 SDH2YLL041C 801 nt-0.64□□□□□ -2.51
HIR3P47171 SLS1YLR139C 1932 nt-0.64□□□□□ -2.51
HIR3P47171 FYV4YHR059W 393 nt-0.64□□□□□ -2.51
HIR3P47171 YIL134C-AYIL134C-A 204 nt-0.64□□□□□ -2.51
HIR3P47171 RPS27AYKL156W 249 nt-0.64□□□□□ -2.51
HIR3P47171 ERV15YBR210W 429 nt-0.64□□□□□ -2.51
HIR3P47171 ASE1YOR058C 2658 nt-0.65□□□□□ -2.51
HIR3P47171 PTP2YOR208W 2253 nt-0.66□□□□□ -2.51
HIR3P47171 FMP23YBR047W 528 nt-0.66□□□□□ -2.51
HIR3P47171 EFR3YMR212C 2349 nt-0.66□□□□□ -2.52
HIR3P47171 AEP3YPL005W 1821 nt-0.66□□□□□ -2.52
HIR3P47171 NME1NME1 340 nt-0.67□□□□□ -2.52
HIR3P47171 JJJ2YJL162C 1752 nt-0.67□□□□□ -2.52
HIR3P47171 RPI1YIL119C 1224 nt-0.67□□□□□ -2.52
HIR3P47171 TIF11YMR260C 462 nt-0.67□□□□□ -2.52
HIR3P47171 BRX1YOL077C 876 nt-0.67□□□□□ -2.52
HIR3P47171 YOR199WYOR199W 330 nt-0.67□□□□□ -2.52
HIR3P47171 APC5YOR249C 2058 nt-0.67□□□□□ -2.52
HIR3P47171 SLD3YGL113W 2007 nt-0.68□□□□□ -2.52
HIR3P47171 PDE2YOR360C 1581 nt-0.68□□□□□ -2.52
HIR3P47171 RPL26BYGR034W 384 nt-0.68□□□□□ -2.52
HIR3P47171 YIR030W-AYIR030W-A 384 nt-0.68□□□□□ -2.52
HIR3P47171 YDR034C-CYDR034C-C 1317 nt-0.69□□□□□ -2.52
HIR3P47171 MUB1YMR100W 1863 nt-0.69□□□□□ -2.52
HIR3P47171 YBP2YGL060W 1926 nt-0.69□□□□□ -2.52
HIR3P47171 VPS52YDR484W 1926 nt-0.7□□□□□ -2.52
HIR3P47171 RAD10YML095C 633 nt-0.71□□□□□ -2.52
HIR3P47171 MCM10YIL150C 1716 nt-0.71□□□□□ -2.52
HIR3P47171 TIM13YGR181W 318 nt-0.72□□□□□ -2.52
HIR3P47171 BIG1YHR101C 1008 nt-0.72□□□□□ -2.52
HIR3P47171 YPR014CYPR014C 330 nt-0.72□□□□□ -2.52
HIR3P47171 CUL3YGR003W 2235 nt-0.72□□□□□ -2.53
HIR3P47171 PET111YMR257C 2403 nt-0.73□□□□□ -2.53
HIR3P47171 AHC2YCR082W 387 nt-0.74□□□□□ -2.53
HIR3P47171 YDR320W-BYDR320W-B 138 nt-0.74□□□□□ -2.53
HIR3P47171 YDR509WYDR509W 348 nt-0.74□□□□□ -2.53
HIR3P47171 TIM21YGR033C 720 nt-0.74□□□□□ -2.53
HIR3P47171 YHR212CYHR212C 336 nt-0.74□□□□□ -2.53
HIR3P47171 YAR060CYAR060C 336 nt-0.74□□□□□ -2.53
HIR3P47171 YOR282WYOR282W 321 nt-0.74□□□□□ -2.53
HIR3P47171 CDC10YCR002C 969 nt-0.75□□□□□ -2.53
HIR3P47171 ISD11YER048W-A 285 nt-0.75□□□□□ -2.53
HIR3P47171 NOP10YHR072W-A 177 nt-0.75□□□□□ -2.53
HIR3P47171 NFU1YKL040C 771 nt-0.75□□□□□ -2.53
HIR3P47171 snR84snR84 550 nt-0.75□□□□□ -2.53
Retrieved 100 of 7,029 protein–RNA pairs in 17.2 ms