Protein–RNA interactions for Protein: P47017

LSM1, Sm-like protein LSm1, yeastyeast

Known RBP Predictions only

Length 172 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
LSM1P47017 ATC1YDR184C 885 nt0.59□□□□□ -2.31
LSM1P47017 DPB11YJL090C 2295 nt0.59□□□□□ -2.32
LSM1P47017 TOF2YKR010C 2316 nt0.58□□□□□ -2.32
LSM1P47017 RPL29YFR032C-A 180 nt0.58□□□□□ -2.32
LSM1P47017 SVP26YHR181W 687 nt0.58□□□□□ -2.32
LSM1P47017 YJL086CYJL086C 369 nt0.58□□□□□ -2.32
LSM1P47017 YBL073WYBL073W 312 nt0.58□□□□□ -2.32
LSM1P47017 YDL073WYDL073W 2955 nt0.58□□□□□ -2.32
LSM1P47017 RSM18YER050C 417 nt0.57□□□□□ -2.32
LSM1P47017 YGL042CYGL042C 306 nt0.57□□□□□ -2.32
LSM1P47017 SEC22YLR268W 645 nt0.57□□□□□ -2.32
LSM1P47017 DDR48YMR173W 1293 nt0.57□□□□□ -2.32
LSM1P47017 RIM20YOR275C 1986 nt0.57□□□□□ -2.32
LSM1P47017 RTR2YDR066C 591 nt0.56□□□□□ -2.32
LSM1P47017 SMB1YER029C 591 nt0.56□□□□□ -2.32
LSM1P47017 tT(AGU)BtT(AGU)B 73 nt0.56□□□□□ -2.32
LSM1P47017 tT(AGU)CtT(AGU)C 73 nt0.56□□□□□ -2.32
LSM1P47017 tT(AGU)DtT(AGU)D 73 nt0.56□□□□□ -2.32
LSM1P47017 tT(AGU)HtT(AGU)H 73 nt0.56□□□□□ -2.32
LSM1P47017 tT(AGU)I1tT(AGU)I1 73 nt0.56□□□□□ -2.32
LSM1P47017 tT(AGU)I2tT(AGU)I2 73 nt0.56□□□□□ -2.32
LSM1P47017 tT(AGU)JtT(AGU)J 73 nt0.56□□□□□ -2.32
LSM1P47017 tT(AGU)N1tT(AGU)N1 73 nt0.56□□□□□ -2.32
LSM1P47017 tT(AGU)N2tT(AGU)N2 73 nt0.56□□□□□ -2.32
LSM1P47017 tT(AGU)O1tT(AGU)O1 73 nt0.56□□□□□ -2.32
LSM1P47017 tT(AGU)O2tT(AGU)O2 73 nt0.56□□□□□ -2.32
LSM1P47017 YMR075C-AYMR075C-A 366 nt0.56□□□□□ -2.32
LSM1P47017 YMR324CYMR324C 243 nt0.56□□□□□ -2.32
LSM1P47017 SGD1YLR336C 2700 nt0.56□□□□□ -2.32
LSM1P47017 YML002WYML002W 2214 nt0.55□□□□□ -2.32
LSM1P47017 GPM2YDL021W 936 nt0.55□□□□□ -2.32
LSM1P47017 RUB1YDR139C 234 nt0.55□□□□□ -2.32
LSM1P47017 VPS63YLR261C 327 nt0.55□□□□□ -2.32
LSM1P47017 VPS74YDR372C 1038 nt0.54□□□□□ -2.32
LSM1P47017 PAU2YEL049W 363 nt0.54□□□□□ -2.32
LSM1P47017 SMD3YLR147C 306 nt0.54□□□□□ -2.32
LSM1P47017 UFE1YOR075W 1041 nt0.54□□□□□ -2.32
LSM1P47017 NUT1YGL151W 3399 nt0.53□□□□□ -2.32
LSM1P47017 YDR248CYDR248C 582 nt0.53□□□□□ -2.32
LSM1P47017 MXR1YER042W 555 nt0.53□□□□□ -2.32
LSM1P47017 CRG1YHR209W 876 nt0.53□□□□□ -2.32
LSM1P47017 YIL142C-AYIL142C-A 333 nt0.53□□□□□ -2.32
LSM1P47017 YBR012CYBR012C 420 nt0.53□□□□□ -2.32
LSM1P47017 TYE7YOR344C 876 nt0.53□□□□□ -2.32
LSM1P47017 YCL046WYCL046W 324 nt0.53□□□□□ -2.32
LSM1P47017 UTP10YJL109C 5310 nt0.53□□□□□ -2.32
LSM1P47017 snR83snR83 306 nt0.52□□□□□ -2.33
LSM1P47017 CHZ1YER030W 462 nt0.52□□□□□ -2.33
LSM1P47017 LSO2YGR169C-A 279 nt0.52□□□□□ -2.33
LSM1P47017 GPX1YKL026C 504 nt0.52□□□□□ -2.33
LSM1P47017 RPL38YLR325C 237 nt0.52□□□□□ -2.33
LSM1P47017 NBP1YLR457C 960 nt0.52□□□□□ -2.33
LSM1P47017 GIM5YML094W 492 nt0.52□□□□□ -2.33
LSM1P47017 YMR158C-AYMR158C-A 138 nt0.52□□□□□ -2.33
LSM1P47017 SUS1YBR111W-A 291 nt0.52□□□□□ -2.33
LSM1P47017 NUP82YJL061W 2142 nt0.52□□□□□ -2.33
LSM1P47017 SHE9YDR393W 1371 nt0.51□□□□□ -2.33
LSM1P47017 RMD6YEL072W 696 nt0.51□□□□□ -2.33
LSM1P47017 GUP1YGL084C 1683 nt0.51□□□□□ -2.33
LSM1P47017 YGL109WYGL109W 324 nt0.51□□□□□ -2.33
LSM1P47017 PAM16YJL104W 450 nt0.51□□□□□ -2.33
LSM1P47017 KAR3YPR141C 2190 nt0.5□□□□□ -2.33
LSM1P47017 YBR184WYBR184W 1572 nt0.5□□□□□ -2.33
LSM1P47017 IES5YER092W 378 nt0.5□□□□□ -2.33
LSM1P47017 SNO3YFL060C 669 nt0.5□□□□□ -2.33
LSM1P47017 SNO2YNL334C 669 nt0.5□□□□□ -2.33
LSM1P47017 REF2YDR195W 1602 nt0.49□□□□□ -2.33
LSM1P47017 MPT5YGL178W 2580 nt0.49□□□□□ -2.33
LSM1P47017 YDL068WYDL068W 330 nt0.49□□□□□ -2.33
LSM1P47017 YGR045CYGR045C 363 nt0.49□□□□□ -2.33
LSM1P47017 PAU18YLL064C 363 nt0.49□□□□□ -2.33
LSM1P47017 RPS30AYLR287C-A 192 nt0.49□□□□□ -2.33
LSM1P47017 RPS7BYNL096C 573 nt0.49□□□□□ -2.33
LSM1P47017 PAU6YNR076W 363 nt0.49□□□□□ -2.33
LSM1P47017 YBR200W-AYBR200W-A 165 nt0.49□□□□□ -2.33
LSM1P47017 YBR221W-AYBR221W-A 105 nt0.49□□□□□ -2.33
LSM1P47017 YDL206WYDL206W 2289 nt0.49□□□□□ -2.33
LSM1P47017 15S_rRNA15S_rRNA 1649 nt0.49□□□□□ -2.33
LSM1P47017 PRP16YKR086W 3216 nt0.49□□□□□ -2.33
LSM1P47017 YDR034C-CYDR034C-C 1317 nt0.48□□□□□ -2.33
LSM1P47017 YFL002W-BYFL002W-B 1317 nt0.48□□□□□ -2.33
LSM1P47017 YGR161W-AYGR161W-A 1317 nt0.48□□□□□ -2.33
LSM1P47017 YLR410W-AYLR410W-A 1317 nt0.48□□□□□ -2.33
LSM1P47017 YBL100W-AYBL100W-A 1317 nt0.48□□□□□ -2.33
LSM1P47017 YOR192C-AYOR192C-A 1317 nt0.48□□□□□ -2.33
LSM1P47017 YCL020WYCL020W 1317 nt0.48□□□□□ -2.33
LSM1P47017 RNR4YGR180C 1038 nt0.48□□□□□ -2.33
LSM1P47017 RPL42BYHR141C 321 nt0.48□□□□□ -2.33
LSM1P47017 BMT5YIL096C 1011 nt0.48□□□□□ -2.33
LSM1P47017 TMA22YJR014W 597 nt0.48□□□□□ -2.33
LSM1P47017 RPL42AYNL162W 321 nt0.48□□□□□ -2.33
LSM1P47017 SWF1YDR126W 1011 nt0.47□□□□□ -2.33
LSM1P47017 TIM8YJR135W-A 264 nt0.47□□□□□ -2.33
LSM1P47017 NUT2YPR168W 474 nt0.47□□□□□ -2.33
LSM1P47017 PIG1YLR273C 1947 nt0.46□□□□□ -2.34
LSM1P47017 YDL196WYDL196W 330 nt0.46□□□□□ -2.34
LSM1P47017 LSM12YHR121W 564 nt0.46□□□□□ -2.34
LSM1P47017 YLL007CYLL007C 1998 nt0.46□□□□□ -2.34
LSM1P47017 NOC3YLR002C 1992 nt0.45□□□□□ -2.34
LSM1P47017 OST5YGL226C-A 261 nt0.45□□□□□ -2.34
Retrieved 100 of 7,029 protein–RNA pairs in 44.7 ms