Protein–RNA interactions for Protein: P42839

VNX1, Low affinity vacuolar monovalent cation/H(+) antiporter, yeastyeast

Predictions only

Length 908 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
VNX1P42839 TFC1YBR123C 1950 nt4.11□□□□□ -1.75
VNX1P42839 BIR1YJR089W 2865 nt4.11□□□□□ -1.75
VNX1P42839 YIL002W-AYIL002W-A 210 nt4.11□□□□□ -1.75
VNX1P42839 YOL075CYOL075C 3885 nt4.11□□□□□ -1.75
VNX1P42839 MNE1YOR350C 1992 nt4.11□□□□□ -1.75
VNX1P42839 NOP9YJL010C 2001 nt4.11□□□□□ -1.75
VNX1P42839 YJL070CYJL070C 2667 nt4.1□□□□□ -1.75
VNX1P42839 SSB1YDL229W 1842 nt4.1□□□□□ -1.75
VNX1P42839 FAR1YJL157C 2493 nt4.1□□□□□ -1.75
VNX1P42839 SNA2YDR525W-A 240 nt4.1□□□□□ -1.75
VNX1P42839 YIL165CYIL165C 360 nt4.1□□□□□ -1.75
VNX1P42839 VHC1YBR235W 3363 nt4.1□□□□□ -1.75
VNX1P42839 COA3YJL062W-A 258 nt4.09□□□□□ -1.75
VNX1P42839 ZDS1YMR273C 2748 nt4.09□□□□□ -1.75
VNX1P42839 SWI6YLR182W 2412 nt4.09□□□□□ -1.76
VNX1P42839 TIF4632YGL049C 2745 nt4.08□□□□□ -1.76
VNX1P42839 KAP114YGL241W 3015 nt4.08□□□□□ -1.76
VNX1P42839 NAT1YDL040C 2565 nt4.08□□□□□ -1.76
VNX1P42839 YLR416CYLR416C 399 nt4.08□□□□□ -1.76
VNX1P42839 MMS4YBR098W 2076 nt4.08□□□□□ -1.76
VNX1P42839 YIL080WYIL080W 4722 nt4.08□□□□□ -1.76
VNX1P42839 COG6YNL041C 2520 nt4.07□□□□□ -1.76
VNX1P42839 YAT2YER024W 2772 nt4.07□□□□□ -1.76
VNX1P42839 YOR108C-AYOR108C-A 210 nt4.06□□□□□ -1.76
VNX1P42839 YPR108W-AYPR108W-A 213 nt4.06□□□□□ -1.76
VNX1P42839 SAP4YGL229C 2457 nt4.06□□□□□ -1.76
VNX1P42839 CDC15YAR019C 2925 nt4.06□□□□□ -1.76
VNX1P42839 MSD1YPL104W 1977 nt4.05□□□□□ -1.76
VNX1P42839 BRE4YDL231C 3378 nt4.05□□□□□ -1.76
VNX1P42839 RTC1YOL138C 4026 nt4.05□□□□□ -1.76
VNX1P42839 RPG1YBR079C 2895 nt4.04□□□□□ -1.76
VNX1P42839 SET2YJL168C 2202 nt4.04□□□□□ -1.76
VNX1P42839 BCK2YER167W 2556 nt4.04□□□□□ -1.76
VNX1P42839 FAP7YDL166C 594 nt4.03□□□□□ -1.76
VNX1P42839 tS(AGA)D3tS(AGA)D3 83 nt4.03□□□□□ -1.76
VNX1P42839 RTT107YHR154W 3213 nt4.03□□□□□ -1.76
VNX1P42839 EXO84YBR102C 2262 nt4.02□□□□□ -1.77
VNX1P42839 MAK10YEL053C 2202 nt4.02□□□□□ -1.77
VNX1P42839 MDR1YGR100W 2853 nt4.02□□□□□ -1.77
VNX1P42839 SMT3YDR510W 306 nt4.02□□□□□ -1.77
VNX1P42839 YLR286W-AYLR286W-A 135 nt4.02□□□□□ -1.77
VNX1P42839 SEC1YDR164C 2175 nt4.02□□□□□ -1.77
VNX1P42839 CIN1YOR349W 3045 nt4.01□□□□□ -1.77
VNX1P42839 SEF1YBL066C 3447 nt4.01□□□□□ -1.77
VNX1P42839 SNF2YOR290C 5112 nt4.01□□□□□ -1.77
VNX1P42839 RPL23BYER117W 414 nt4□□□□□ -1.77
VNX1P42839 ACB1YGR037C 264 nt4□□□□□ -1.77
VNX1P42839 YKL162C-AYKL162C-A 153 nt4□□□□□ -1.77
VNX1P42839 OSH2YDL019C 3852 nt4□□□□□ -1.77
VNX1P42839 NUP133YKR082W 3474 nt4□□□□□ -1.77
VNX1P42839 PDR12YPL058C 4536 nt4□□□□□ -1.77
VNX1P42839 PUT3YKL015W 2940 nt3.99□□□□□ -1.77
VNX1P42839 YKL050CYKL050C 2769 nt3.99□□□□□ -1.77
VNX1P42839 21S_rRNA21S_rRNA 3296 nt3.99□□□□□ -1.77
VNX1P42839 TCO89YPL180W 2400 nt3.99□□□□□ -1.77
VNX1P42839 KAP120YPL125W 3099 nt3.98□□□□□ -1.77
VNX1P42839 tK(CUU)CtK(CUU)C 73 nt3.98□□□□□ -1.77
VNX1P42839 tK(CUU)D1tK(CUU)D1 73 nt3.98□□□□□ -1.77
VNX1P42839 tK(CUU)D2tK(CUU)D2 73 nt3.98□□□□□ -1.77
VNX1P42839 tK(CUU)E1tK(CUU)E1 73 nt3.98□□□□□ -1.77
VNX1P42839 tK(CUU)E2tK(CUU)E2 73 nt3.98□□□□□ -1.77
VNX1P42839 tK(CUU)FtK(CUU)F 73 nt3.98□□□□□ -1.77
VNX1P42839 tK(CUU)G1tK(CUU)G1 73 nt3.98□□□□□ -1.77
VNX1P42839 tK(CUU)G2tK(CUU)G2 73 nt3.98□□□□□ -1.77
VNX1P42839 tK(CUU)G3tK(CUU)G3 73 nt3.98□□□□□ -1.77
VNX1P42839 tK(CUU)ItK(CUU)I 73 nt3.98□□□□□ -1.77
VNX1P42839 tK(CUU)JtK(CUU)J 73 nt3.98□□□□□ -1.77
VNX1P42839 tK(CUU)KtK(CUU)K 73 nt3.98□□□□□ -1.77
VNX1P42839 tK(CUU)MtK(CUU)M 73 nt3.98□□□□□ -1.77
VNX1P42839 tK(CUU)PtK(CUU)P 73 nt3.98□□□□□ -1.77
VNX1P42839 tM(CAU)Q2tM(CAU)Q2 78 nt3.98□□□□□ -1.77
VNX1P42839 YKL225WYKL225W 348 nt3.98□□□□□ -1.77
VNX1P42839 RGM1YMR182C 636 nt3.98□□□□□ -1.77
VNX1P42839 RPH1YER169W 2391 nt3.98□□□□□ -1.77
VNX1P42839 CCM1YGR150C 2595 nt3.98□□□□□ -1.77
VNX1P42839 YIL156W-BYIL156W-B 222 nt3.97□□□□□ -1.77
VNX1P42839 YLL020CYLL020C 306 nt3.97□□□□□ -1.77
VNX1P42839 PWP2YCR057C 2772 nt3.97□□□□□ -1.77
VNX1P42839 EGT2YNL327W 3126 nt3.97□□□□□ -1.77
VNX1P42839 UBP11YKR098C 2154 nt3.96□□□□□ -1.78
VNX1P42839 TTI1YKL033W 3117 nt3.96□□□□□ -1.78
VNX1P42839 YDR354C-AYDR354C-A 144 nt3.96□□□□□ -1.78
VNX1P42839 YBL039C-AYBL039C-A 84 nt3.96□□□□□ -1.78
VNX1P42839 LHS1YKL073W 2646 nt3.95□□□□□ -1.78
VNX1P42839 YPL150WYPL150W 2706 nt3.95□□□□□ -1.78
VNX1P42839 RPL14AYKL006W 417 nt3.95□□□□□ -1.78
VNX1P42839 SKP2YNL311C 2292 nt3.95□□□□□ -1.78
VNX1P42839 YLR352WYLR352W 2424 nt3.94□□□□□ -1.78
VNX1P42839 SUP56tL(CAA)A 82 nt3.94□□□□□ -1.78
VNX1P42839 SUP53tL(CAA)C 82 nt3.94□□□□□ -1.78
VNX1P42839 tL(CAA)DtL(CAA)D 82 nt3.94□□□□□ -1.78
VNX1P42839 tL(CAA)G1tL(CAA)G1 82 nt3.94□□□□□ -1.78
VNX1P42839 SUP54tL(CAA)G2 82 nt3.94□□□□□ -1.78
VNX1P42839 tL(CAA)G3tL(CAA)G3 82 nt3.94□□□□□ -1.78
VNX1P42839 tL(CAA)KtL(CAA)K 82 nt3.94□□□□□ -1.78
VNX1P42839 tL(CAA)LtL(CAA)L 82 nt3.94□□□□□ -1.78
VNX1P42839 tL(CAA)MtL(CAA)M 82 nt3.94□□□□□ -1.78
VNX1P42839 tL(CAA)NtL(CAA)N 82 nt3.94□□□□□ -1.78
VNX1P42839 YLR041WYLR041W 321 nt3.94□□□□□ -1.78
VNX1P42839 VID27YNL212W 2349 nt3.94□□□□□ -1.78
Retrieved 100 of 7,029 protein–RNA pairs in 82.5 ms