Protein–RNA interactions for Protein: P32561

RPD3, Histone deacetylase RPD3, yeastyeast

Predictions only

Length 433 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
RPD3P32561 YBR184WYBR184W 1572 nt2.67□□□□□ -1.98
RPD3P32561 INP52YNL106C 3552 nt2.67□□□□□ -1.98
RPD3P32561 MET6YER091C 2304 nt2.67□□□□□ -1.98
RPD3P32561 YLR278CYLR278C 4026 nt2.67□□□□□ -1.98
RPD3P32561 LCD1YDR499W 2244 nt2.67□□□□□ -1.98
RPD3P32561 NOP10YHR072W-A 177 nt2.67□□□□□ -1.98
RPD3P32561 YOL160WYOL160W 342 nt2.67□□□□□ -1.98
RPD3P32561 PMR1YGL167C 2853 nt2.67□□□□□ -1.98
RPD3P32561 SEF1YBL066C 3447 nt2.67□□□□□ -1.98
RPD3P32561 SUL1YBR294W 2580 nt2.67□□□□□ -1.98
RPD3P32561 RTT10YPL183C 3042 nt2.66□□□□□ -1.98
RPD3P32561 RRP12YPL012W 3687 nt2.66□□□□□ -1.98
RPD3P32561 TAE2YPL009C 3117 nt2.66□□□□□ -1.98
RPD3P32561 YDR209CYDR209C 414 nt2.66□□□□□ -1.98
RPD3P32561 YGL052WYGL052W 306 nt2.66□□□□□ -1.98
RPD3P32561 NPR2YEL062W 1848 nt2.65□□□□□ -1.98
RPD3P32561 TFC4YGR047C 3078 nt2.65□□□□□ -1.98
RPD3P32561 FLO5YHR211W 3228 nt2.65□□□□□ -1.98
RPD3P32561 YDL185C-AYDL185C-A 228 nt2.65□□□□□ -1.99
RPD3P32561 PAU2YEL049W 363 nt2.65□□□□□ -1.99
RPD3P32561 PFD1YJL179W 330 nt2.65□□□□□ -1.99
RPD3P32561 YPR002C-AYPR002C-A 198 nt2.65□□□□□ -1.99
RPD3P32561 BUD4YJR092W 4344 nt2.65□□□□□ -1.99
RPD3P32561 YLR149CYLR149C 2193 nt2.64□□□□□ -1.99
RPD3P32561 CRM1YGR218W 3255 nt2.64□□□□□ -1.99
RPD3P32561 CAF120YNL278W 3183 nt2.64□□□□□ -1.99
RPD3P32561 INP53YOR109W 3324 nt2.64□□□□□ -1.99
RPD3P32561 COS111YBR203W 2775 nt2.64□□□□□ -1.99
RPD3P32561 SAP1YER047C 2694 nt2.64□□□□□ -1.99
RPD3P32561 SNQ2YDR011W 4506 nt2.64□□□□□ -1.99
RPD3P32561 YLR146W-AYLR146W-A 189 nt2.64□□□□□ -1.99
RPD3P32561 UPS1YLR193C 528 nt2.64□□□□□ -1.99
RPD3P32561 YMR122W-AYMR122W-A 255 nt2.64□□□□□ -1.99
RPD3P32561 YMR141W-AYMR141W-A 225 nt2.64□□□□□ -1.99
RPD3P32561 CFT2YLR115W 2580 nt2.64□□□□□ -1.99
RPD3P32561 AFI1YOR129C 2682 nt2.64□□□□□ -1.99
RPD3P32561 PEP3YLR148W 2757 nt2.63□□□□□ -1.99
RPD3P32561 tK(UUU)DtK(UUU)D 73 nt2.63□□□□□ -1.99
RPD3P32561 tK(UUU)G1tK(UUU)G1 73 nt2.63□□□□□ -1.99
RPD3P32561 tK(UUU)G2tK(UUU)G2 73 nt2.63□□□□□ -1.99
RPD3P32561 tK(UUU)KtK(UUU)K 73 nt2.63□□□□□ -1.99
RPD3P32561 tK(UUU)LtK(UUU)L 73 nt2.63□□□□□ -1.99
RPD3P32561 tK(UUU)OtK(UUU)O 73 nt2.63□□□□□ -1.99
RPD3P32561 tK(UUU)PtK(UUU)P 73 nt2.63□□□□□ -1.99
RPD3P32561 ACB1YGR037C 264 nt2.63□□□□□ -1.99
RPD3P32561 CSE2YNR010W 450 nt2.63□□□□□ -1.99
RPD3P32561 APC9YLR102C 798 nt2.62□□□□□ -1.99
RPD3P32561 YBL008W-AYBL008W-A 240 nt2.62□□□□□ -1.99
RPD3P32561 ESL1YIL151C 3357 nt2.62□□□□□ -1.99
RPD3P32561 SCH9YHR205W 2475 nt2.62□□□□□ -1.99
RPD3P32561 NMD2YHR077C 3270 nt2.62□□□□□ -1.99
RPD3P32561 YIL082W-AYIL082W-A 4497 nt2.62□□□□□ -1.99
RPD3P32561 VPS34YLR240W 2628 nt2.61□□□□□ -1.99
RPD3P32561 CDC27YBL084C 2277 nt2.61□□□□□ -1.99
RPD3P32561 MDM1YML104C 3384 nt2.61□□□□□ -1.99
RPD3P32561 PNC1YGL037C 651 nt2.61□□□□□ -1.99
RPD3P32561 tQ(UUG)BtQ(UUG)B 72 nt2.61□□□□□ -1.99
RPD3P32561 VPS55YJR044C 423 nt2.61□□□□□ -1.99
RPD3P32561 RPS12YOR369C 432 nt2.61□□□□□ -1.99
RPD3P32561 snR43snR43 209 nt2.61□□□□□ -1.99
RPD3P32561 SPO14YKR031C 5052 nt2.61□□□□□ -1.99
RPD3P32561 UTP14YML093W 2700 nt2.61□□□□□ -1.99
RPD3P32561 GRR1YJR090C 3456 nt2.61□□□□□ -1.99
RPD3P32561 SWI6YLR182W 2412 nt2.6□□□□□ -1.99
RPD3P32561 RRP6YOR001W 2202 nt2.6□□□□□ -1.99
RPD3P32561 tF(GAA)DtF(GAA)D 73 nt2.6□□□□□ -1.99
RPD3P32561 tF(GAA)NtF(GAA)N 73 nt2.6□□□□□ -1.99
RPD3P32561 tF(GAA)QtF(GAA)Q 75 nt2.6□□□□□ -1.99
RPD3P32561 YLR120W-AYLR120W-A 102 nt2.6□□□□□ -1.99
RPD3P32561 YOR302WYOR302W 78 nt2.6□□□□□ -1.99
RPD3P32561 YBR277CYBR277C 402 nt2.6□□□□□ -1.99
RPD3P32561 MUK1YPL070W 1839 nt2.6□□□□□ -1.99
RPD3P32561 SKP2YNL311C 2292 nt2.59□□□□□ -1.99
RPD3P32561 ERP6YGL002W 651 nt2.59□□□□□ -1.99
RPD3P32561 YLR342W-AYLR342W-A 174 nt2.59□□□□□ -1.99
RPD3P32561 LCL1YPL056C 306 nt2.59□□□□□ -1.99
RPD3P32561 VIK1YPL253C 1944 nt2.59□□□□□ -1.99
RPD3P32561 NOP53YPL146C 1368 nt2.59□□□□□ -2
RPD3P32561 MNL2YLR057W 2550 nt2.58□□□□□ -2
RPD3P32561 YDR239CYDR239C 2364 nt2.58□□□□□ -2
RPD3P32561 INP2YMR163C 2118 nt2.58□□□□□ -2
RPD3P32561 YMR321CYMR321C 318 nt2.58□□□□□ -2
RPD3P32561 GIS1YDR096W 2685 nt2.58□□□□□ -2
RPD3P32561 YEL043WYEL043W 2871 nt2.58□□□□□ -2
RPD3P32561 YGR067CYGR067C 2415 nt2.58□□□□□ -2
RPD3P32561 PLC1YPL268W 2610 nt2.57□□□□□ -2
RPD3P32561 MDM20YOL076W 2391 nt2.57□□□□□ -2
RPD3P32561 SSS1YDR086C 243 nt2.57□□□□□ -2
RPD3P32561 YDR286CYDR286C 345 nt2.57□□□□□ -2
RPD3P32561 YEL014CYEL014C 306 nt2.57□□□□□ -2
RPD3P32561 YAL042C-AYAL042C-A 378 nt2.57□□□□□ -2
RPD3P32561 RRT15YLR162W-A 189 nt2.57□□□□□ -2
RPD3P32561 MOT1YPL082C 5604 nt2.57□□□□□ -2
RPD3P32561 INP51YIL002C 2841 nt2.56□□□□□ -2
RPD3P32561 IRR1YIL026C 3453 nt2.56□□□□□ -2
RPD3P32561 ATP8Q0080 147 nt2.56□□□□□ -2
RPD3P32561 PXA2YKL188C 2562 nt2.56□□□□□ -2
RPD3P32561 SLH1YGR271W 5904 nt2.56□□□□□ -2
RPD3P32561 PDE2YOR360C 1581 nt2.56□□□□□ -2
RPD3P32561 MMS1YPR164W 4224 nt2.56□□□□□ -2
Retrieved 100 of 7,029 protein–RNA pairs in 68.1 ms