Protein–RNA interactions for Protein: P27999

RPB9, DNA-directed RNA polymerase II subunit RPB9, yeastyeast

Predictions only

Length 122 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
RPB9P27999 EGD1YPL037C 474 nt1.51□□□□□ -2.17
RPB9P27999 YBR224WYBR224W 516 nt1.51□□□□□ -2.17
RPB9P27999 SFB2YNL049C 2631 nt1.51□□□□□ -2.17
RPB9P27999 NUP192YJL039C 5052 nt1.5□□□□□ -2.17
RPB9P27999 RPH1YER169W 2391 nt1.5□□□□□ -2.17
RPB9P27999 LYS9YNR050C 1341 nt1.5□□□□□ -2.17
RPB9P27999 YCR102W-AYCR102W-A 198 nt1.5□□□□□ -2.17
RPB9P27999 YER121WYER121W 345 nt1.5□□□□□ -2.17
RPB9P27999 FCF2YLR051C 654 nt1.5□□□□□ -2.17
RPB9P27999 YLR101CYLR101C 396 nt1.5□□□□□ -2.17
RPB9P27999 YMR272W-BYMR272W-B 108 nt1.5□□□□□ -2.17
RPB9P27999 CDC33YOL139C 642 nt1.5□□□□□ -2.17
RPB9P27999 YBR032WYBR032W 303 nt1.5□□□□□ -2.17
RPB9P27999 SLM1YIL105C 2061 nt1.5□□□□□ -2.17
RPB9P27999 HSH155YMR288W 2916 nt1.5□□□□□ -2.17
RPB9P27999 YLR149CYLR149C 2193 nt1.49□□□□□ -2.17
RPB9P27999 SPP41YDR464W 4308 nt1.49□□□□□ -2.17
RPB9P27999 PEP3YLR148W 2757 nt1.49□□□□□ -2.17
RPB9P27999 DOT6YER088C 2013 nt1.49□□□□□ -2.17
RPB9P27999 PEP1YBL017C 4740 nt1.49□□□□□ -2.17
RPB9P27999 HUR1YGL168W 333 nt1.49□□□□□ -2.17
RPB9P27999 TIF11YMR260C 462 nt1.49□□□□□ -2.17
RPB9P27999 GRR1YJR090C 3456 nt1.49□□□□□ -2.17
RPB9P27999 PMD1YER132C 5262 nt1.49□□□□□ -2.17
RPB9P27999 YBR184WYBR184W 1572 nt1.48□□□□□ -2.17
RPB9P27999 YJR157WYJR157W 363 nt1.48□□□□□ -2.17
RPB9P27999 YKL063CYKL063C 504 nt1.48□□□□□ -2.17
RPB9P27999 YBL083CYBL083C 426 nt1.48□□□□□ -2.17
RPB9P27999 CDC24YAL041W 2565 nt1.48□□□□□ -2.17
RPB9P27999 RBK1YCR036W 1002 nt1.47□□□□□ -2.17
RPB9P27999 YCR087C-AYCR087C-A 462 nt1.47□□□□□ -2.17
RPB9P27999 YER076W-AYER076W-A 348 nt1.47□□□□□ -2.17
RPB9P27999 MGA2YIR033W 3342 nt1.47□□□□□ -2.17
RPB9P27999 MSH6YDR097C 3729 nt1.47□□□□□ -2.17
RPB9P27999 SWT1YOR166C 1377 nt1.47□□□□□ -2.17
RPB9P27999 YDR509WYDR509W 348 nt1.46□□□□□ -2.18
RPB9P27999 YHL037CYHL037C 402 nt1.46□□□□□ -2.18
RPB9P27999 CYB5YNL111C 363 nt1.46□□□□□ -2.18
RPB9P27999 FYV12YOR183W 390 nt1.46□□□□□ -2.18
RPB9P27999 YBR121C-AYBR121C-A 159 nt1.46□□□□□ -2.18
RPB9P27999 TRM3YDL112W 4311 nt1.46□□□□□ -2.18
RPB9P27999 IRC20YLR247C 4671 nt1.45□□□□□ -2.18
RPB9P27999 HCS1YKL017C 2052 nt1.45□□□□□ -2.18
RPB9P27999 CRG1YHR209W 876 nt1.45□□□□□ -2.18
RPB9P27999 URM1YIL008W 300 nt1.45□□□□□ -2.18
RPB9P27999 TMA7YLR262C-A 195 nt1.45□□□□□ -2.18
RPB9P27999 PGA1YNL158W 597 nt1.45□□□□□ -2.18
RPB9P27999 YNL324WYNL324W 396 nt1.45□□□□□ -2.18
RPB9P27999 ZEO1YOL109W 342 nt1.45□□□□□ -2.18
RPB9P27999 GDS1YOR355W 1569 nt1.45□□□□□ -2.18
RPB9P27999 DFG16YOR030W 1860 nt1.45□□□□□ -2.18
RPB9P27999 PDR8YLR266C 2106 nt1.45□□□□□ -2.18
RPB9P27999 DCP2YNL118C 2913 nt1.44□□□□□ -2.18
RPB9P27999 IRE1YHR079C 3348 nt1.44□□□□□ -2.18
RPB9P27999 GCN2YDR283C 4980 nt1.44□□□□□ -2.18
RPB9P27999 QCR7YDR529C 384 nt1.44□□□□□ -2.18
RPB9P27999 YLR264C-AYLR264C-A 117 nt1.44□□□□□ -2.18
RPB9P27999 SEF1YBL066C 3447 nt1.44□□□□□ -2.18
RPB9P27999 LRE1YCL051W 1752 nt1.44□□□□□ -2.18
RPB9P27999 ATG9YDL149W 2994 nt1.44□□□□□ -2.18
RPB9P27999 ZRG8YER033C 3231 nt1.44□□□□□ -2.18
RPB9P27999 VPS34YLR240W 2628 nt1.43□□□□□ -2.18
RPB9P27999 YCR043CYCR043C 384 nt1.43□□□□□ -2.18
RPB9P27999 YDL118WYDL118W 381 nt1.43□□□□□ -2.18
RPB9P27999 BTT1YDR252W 450 nt1.43□□□□□ -2.18
RPB9P27999 VAR1Q0140 1197 nt1.43□□□□□ -2.18
RPB9P27999 TMA22YJR014W 597 nt1.43□□□□□ -2.18
RPB9P27999 YLR222C-AYLR222C-A 231 nt1.43□□□□□ -2.18
RPB9P27999 RUF22RUF22 515 nt1.43□□□□□ -2.18
RPB9P27999 TFC8YPL007C 1767 nt1.43□□□□□ -2.18
RPB9P27999 CTF4YPR135W 2784 nt1.43□□□□□ -2.18
RPB9P27999 PLC1YPL268W 2610 nt1.42□□□□□ -2.18
RPB9P27999 PAU3YCR104W 375 nt1.42□□□□□ -2.18
RPB9P27999 YER087C-AYER087C-A 552 nt1.42□□□□□ -2.18
RPB9P27999 YGR042WYGR042W 816 nt1.42□□□□□ -2.18
RPB9P27999 YHL009W-AYHL009W-A 1242 nt1.42□□□□□ -2.18
RPB9P27999 YHR073W-AYHR073W-A 177 nt1.42□□□□□ -2.18
RPB9P27999 RPL42BYHR141C 321 nt1.42□□□□□ -2.18
RPB9P27999 YHR210CYHR210C 1026 nt1.42□□□□□ -2.18
RPB9P27999 YKL183C-AYKL183C-A 213 nt1.42□□□□□ -2.18
RPB9P27999 YLR406C-AYLR406C-A 150 nt1.42□□□□□ -2.18
RPB9P27999 RPL42AYNL162W 321 nt1.42□□□□□ -2.18
RPB9P27999 YPR099CYPR099C 357 nt1.42□□□□□ -2.18
RPB9P27999 YER023C-AYER023C-A 213 nt1.41□□□□□ -2.18
RPB9P27999 YER135CYER135C 393 nt1.41□□□□□ -2.18
RPB9P27999 NFU1YKL040C 771 nt1.41□□□□□ -2.18
RPB9P27999 YLR287CYLR287C 1068 nt1.41□□□□□ -2.18
RPB9P27999 DAS1YJL149W 1992 nt1.41□□□□□ -2.18
RPB9P27999 PAN3YKL025C 2040 nt1.4□□□□□ -2.18
RPB9P27999 SBE22YHR103W 2559 nt1.4□□□□□ -2.19
RPB9P27999 DIE2YGR227W 1578 nt1.4□□□□□ -2.19
RPB9P27999 GNT1YOR320C 1476 nt1.4□□□□□ -2.19
RPB9P27999 tT(UGU)HtT(UGU)H 72 nt1.4□□□□□ -2.19
RPB9P27999 YML009C-AYML009C-A 327 nt1.4□□□□□ -2.19
RPB9P27999 CGI121YML036W 546 nt1.4□□□□□ -2.19
RPB9P27999 FRK1YPL141C 2598 nt1.4□□□□□ -2.19
RPB9P27999 BPH1YCR032W 6504 nt1.39□□□□□ -2.19
RPB9P27999 TOF2YKR010C 2316 nt1.39□□□□□ -2.19
RPB9P27999 YDR114CYDR114C 303 nt1.39□□□□□ -2.19
RPB9P27999 ERP4YOR016C 624 nt1.39□□□□□ -2.19
Retrieved 100 of 7,029 protein–RNA pairs in 33.3 ms