Protein–RNA interactions for Protein: P07996

THBS1, Thrombospondin-1, humanhuman

Predictions only

Length 1,170 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
THBS1P07996 SCRT1-201ENST00000569446 3779 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
THBS1P07996 UXS1-203ENST00000409501 1839 ntAPPRIS P3 TSL 1 (best) BASIC18.66■□□□□ 0.58
THBS1P07996 GPT-205ENST00000528431 1822 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
THBS1P07996 AC016769.1-201ENST00000409132 1010 ntBASIC18.66■□□□□ 0.58
THBS1P07996 ARL6IP4-205ENST00000412505 818 ntTSL 5 BASIC18.66■□□□□ 0.58
THBS1P07996 ZNRF2P2-202ENST00000442865 590 ntTSL 4 BASIC18.66■□□□□ 0.58
THBS1P07996 IDNK-204ENST00000454393 1210 ntTSL 3 BASIC18.66■□□□□ 0.58
THBS1P07996 COX4I1-216ENST00000568794 794 ntTSL 5 BASIC18.66■□□□□ 0.58
THBS1P07996 EGLN2-202ENST00000406058 2150 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
THBS1P07996 GNA14-201ENST00000341700 2482 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
THBS1P07996 INTS12-206ENST00000451321 1975 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
THBS1P07996 LINC01184-201ENST00000499346 1380 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
THBS1P07996 C7orf43-206ENST00000456769 2046 ntTSL 2 BASIC18.66■□□□□ 0.58
THBS1P07996 IL11RA-201ENST00000318041 1728 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
THBS1P07996 RTBDN-207ENST00000589272 2076 ntTSL 2 BASIC18.65■□□□□ 0.58
THBS1P07996 RFT1-202ENST00000394738 1800 ntTSL 5 BASIC18.65■□□□□ 0.58
THBS1P07996 AMZ1-202ENST00000407112 1862 ntTSL 2 BASIC18.65■□□□□ 0.58
THBS1P07996 NDRG2-242ENST00000555158 2216 ntAPPRIS ALT1 TSL 1 (best) BASIC18.65■□□□□ 0.58
THBS1P07996 NGEF-202ENST00000373552 2286 ntAPPRIS P1 TSL 2 BASIC18.65■□□□□ 0.58
THBS1P07996 CLN3-240ENST00000631023 1586 ntTSL 5 BASIC18.65■□□□□ 0.58
THBS1P07996 NFKBIE-204ENST00000619360 2327 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
THBS1P07996 DPYSL5-202ENST00000401478 1972 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
THBS1P07996 PNKP-214ENST00000600573 1602 ntTSL 5 BASIC18.65■□□□□ 0.58
THBS1P07996 C19orf24-201ENST00000409293 983 ntAPPRIS P1 TSL 2 BASIC18.65■□□□□ 0.58
THBS1P07996 AC006015.1-201ENST00000429970 570 ntBASIC18.65■□□□□ 0.58
THBS1P07996 CMTM8-202ENST00000458535 996 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
THBS1P07996 SLC25A29-212ENST00000555927 960 ntTSL 2 BASIC18.65■□□□□ 0.58
THBS1P07996 KLK9-202ENST00000594211 754 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
THBS1P07996 DPP3P2-201ENST00000416030 1696 ntBASIC18.65■□□□□ 0.58
THBS1P07996 TACC3-213ENST00000617535 1693 ntTSL 5 BASIC18.65■□□□□ 0.58
THBS1P07996 CHD1L-201ENST00000361293 2484 ntTSL 2 BASIC18.65■□□□□ 0.58
THBS1P07996 ASB16-201ENST00000293414 2139 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
THBS1P07996 RAB5A-201ENST00000273047 2536 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
THBS1P07996 RNF38-204ENST00000357058 5254 ntAPPRIS P1 TSL 5 BASIC18.65■□□□□ 0.58
THBS1P07996 PRSS33-204ENST00000576886 1755 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
THBS1P07996 ST3GAL5-202ENST00000377332 2165 ntTSL 5 BASIC18.65■□□□□ 0.58
THBS1P07996 POLD2-202ENST00000406581 2158 ntAPPRIS P1 TSL 2 BASIC18.65■□□□□ 0.58
THBS1P07996 GLT1D1-204ENST00000442111 2995 ntAPPRIS P1 TSL 5 BASIC18.65■□□□□ 0.58
THBS1P07996 NSUN2-206ENST00000506139 2619 ntAPPRIS ALT2 TSL 2 BASIC18.65■□□□□ 0.58
THBS1P07996 VPS53-201ENST00000291074 2656 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
THBS1P07996 SIMC1-203ENST00000429602 2694 ntAPPRIS ALT2 TSL 1 (best) BASIC18.65■□□□□ 0.58
THBS1P07996 KRTAP5-AS1-201ENST00000424148 2265 ntTSL 2 BASIC18.65■□□□□ 0.58
THBS1P07996 SSBP3-216ENST00000610401 3168 ntTSL 5 BASIC18.65■□□□□ 0.58
THBS1P07996 TCF3P1-201ENST00000423021 1937 ntBASIC18.64■□□□□ 0.58
THBS1P07996 HMOX2-218ENST00000619913 1908 ntAPPRIS P1 TSL 5 BASIC18.64■□□□□ 0.58
THBS1P07996 BCAM-201ENST00000270233 2402 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.58
THBS1P07996 TGIF1-207ENST00000407501 1585 ntAPPRIS P1 TSL 3 BASIC18.64■□□□□ 0.58
THBS1P07996 DLG3-201ENST00000194900 6112 ntAPPRIS ALT2 TSL 5 BASIC18.64■□□□□ 0.58
THBS1P07996 GYG1-202ENST00000345003 2052 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
THBS1P07996 RASL12-201ENST00000220062 2640 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
THBS1P07996 WIPF1-203ENST00000392546 2180 ntAPPRIS P2 TSL 5 BASIC18.64■□□□□ 0.57
THBS1P07996 AL390879.2-201ENST00000424306 2222 ntTSL 2 BASIC18.64■□□□□ 0.57
THBS1P07996 AL391422.3-201ENST00000603791 2761 ntBASIC18.64■□□□□ 0.57
THBS1P07996 ODF3B-201ENST00000329363 970 ntAPPRIS P1 TSL 5 BASIC18.64■□□□□ 0.57
THBS1P07996 SOCS1-201ENST00000332029 1225 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
THBS1P07996 ID1-201ENST00000376105 1233 ntBASIC18.64■□□□□ 0.57
THBS1P07996 LINC01976-201ENST00000565120 434 ntTSL 2 BASIC18.64■□□□□ 0.57
THBS1P07996 HERC2P5-204ENST00000569697 1214 ntTSL 2 BASIC18.64■□□□□ 0.57
THBS1P07996 ELAC1-204ENST00000591429 975 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
THBS1P07996 AC016405.3-201ENST00000607710 860 ntBASIC18.64■□□□□ 0.57
THBS1P07996 AC100791.3-201ENST00000617619 330 ntBASIC18.64■□□□□ 0.57
THBS1P07996 GGTLC3-201ENST00000619998 968 ntAPPRIS P1 TSL 5 BASIC18.64■□□□□ 0.57
THBS1P07996 AL032819.3-201ENST00000640283 925 ntAPPRIS P1 TSL 5 BASIC18.64■□□□□ 0.57
THBS1P07996 C18orf25-204ENST00000615553 2329 ntTSL 5 BASIC18.64■□□□□ 0.57
THBS1P07996 AC016065.1-201ENST00000500118 2413 ntTSL 2 BASIC18.64■□□□□ 0.57
THBS1P07996 SAC3D1-205ENST00000531072 1362 ntAPPRIS P1 TSL 2 BASIC18.64■□□□□ 0.57
THBS1P07996 ME2-218ENST00000640965 2476 ntTSL 5 BASIC18.64■□□□□ 0.57
THBS1P07996 C7orf43-201ENST00000316937 2520 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
THBS1P07996 BST1-202ENST00000382346 1993 ntAPPRIS ALT2 TSL 5 BASIC18.64■□□□□ 0.57
THBS1P07996 SEMA6B-202ENST00000586965 2034 ntAPPRIS ALT2 TSL 1 (best) BASIC18.64■□□□□ 0.57
THBS1P07996 DENND6A-201ENST00000311128 4655 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
THBS1P07996 UAP1-201ENST00000271469 2377 ntAPPRIS ALT1 TSL 5 BASIC18.63■□□□□ 0.57
THBS1P07996 EIF2B4-201ENST00000347454 1792 ntAPPRIS P3 TSL 1 (best) BASIC18.63■□□□□ 0.57
THBS1P07996 SOX12-201ENST00000342665 4630 ntAPPRIS P1 BASIC18.63■□□□□ 0.57
THBS1P07996 UBXN6-201ENST00000301281 1943 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
THBS1P07996 CAMKMT-202ENST00000402247 665 ntTSL 2 BASIC18.63■□□□□ 0.57
THBS1P07996 PLLP-204ENST00000569059 665 ntTSL 3 BASIC18.63■□□□□ 0.57
THBS1P07996 AC092143.4-201ENST00000570217 559 ntTSL 4 BASIC18.63■□□□□ 0.57
THBS1P07996 CXCL16-201ENST00000293778 2222 ntAPPRIS P2 TSL 1 (best) BASIC18.63■□□□□ 0.57
THBS1P07996 MAG-203ENST00000537831 2341 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
THBS1P07996 FMR1-208ENST00000440235 4271 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
THBS1P07996 PLBD1-201ENST00000240617 2426 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
THBS1P07996 PLLP-201ENST00000219207 1512 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
THBS1P07996 UBE2L6-202ENST00000340573 1573 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
THBS1P07996 ST6GAL2-203ENST00000409087 1657 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
THBS1P07996 SPTBN4-201ENST00000338932 8686 ntAPPRIS ALT1 TSL 5 BASIC18.63■□□□□ 0.57
THBS1P07996 NR5A1-202ENST00000373588 3104 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
THBS1P07996 UBAP1-204ENST00000625521 2029 ntTSL 2 BASIC18.62■□□□□ 0.57
THBS1P07996 USP25-202ENST00000285681 5216 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
THBS1P07996 SMURF1-202ENST00000361368 5581 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
THBS1P07996 RUNX3-202ENST00000338888 2629 ntAPPRIS ALT2 TSL 1 (best) BASIC18.62■□□□□ 0.57
THBS1P07996 EYA2-202ENST00000327619 2702 ntAPPRIS P1 TSL 2 BASIC18.62■□□□□ 0.57
THBS1P07996 RAMP2-201ENST00000253796 780 ntAPPRIS P2 TSL 1 (best) BASIC18.62■□□□□ 0.57
THBS1P07996 AC099681.3-201ENST00000421500 939 ntTSL 4 BASIC18.62■□□□□ 0.57
THBS1P07996 CNN2P6-201ENST00000439038 900 ntBASIC18.62■□□□□ 0.57
THBS1P07996 RARRES2P4-201ENST00000514074 484 ntBASIC18.62■□□□□ 0.57
THBS1P07996 DUX4L16-201ENST00000555130 1264 ntBASIC18.62■□□□□ 0.57
THBS1P07996 SEPT4-215ENST00000580809 952 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
THBS1P07996 AC093762.2-201ENST00000641700 291 ntAPPRIS P1 BASIC18.62■□□□□ 0.57
THBS1P07996 CERKL-203ENST00000374969 1330 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
Retrieved 100 of 98,524 protein–RNA pairs in 29.5 ms