Protein–RNA interactions for Protein: P04819

CDC9, DNA ligase 1, yeastyeast

Predictions only

Length 755 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
CDC9P04819 RPL38YLR325C 237 nt2.61□□□□□ -1.99
CDC9P04819 SEC7YDR170C 6030 nt2.61□□□□□ -1.99
CDC9P04819 ISW1YBR245C 3390 nt2.61□□□□□ -1.99
CDC9P04819 INP52YNL106C 3552 nt2.6□□□□□ -1.99
CDC9P04819 YER079C-AYER079C-A 339 nt2.6□□□□□ -1.99
CDC9P04819 KEL2YGR238C 2649 nt2.6□□□□□ -1.99
CDC9P04819 MGM1YOR211C 2646 nt2.6□□□□□ -1.99
CDC9P04819 ZRG8YER033C 3231 nt2.6□□□□□ -1.99
CDC9P04819 EFR3YMR212C 2349 nt2.59□□□□□ -1.99
CDC9P04819 YLR278CYLR278C 4026 nt2.59□□□□□ -1.99
CDC9P04819 YDR048CYDR048C 315 nt2.59□□□□□ -1.99
CDC9P04819 YLR053CYLR053C 327 nt2.59□□□□□ -1.99
CDC9P04819 MF(ALPHA)1YPL187W 498 nt2.59□□□□□ -1.99
CDC9P04819 RPL36BYPL249C-A 303 nt2.59□□□□□ -1.99
CDC9P04819 DAD3YBR233W-A 285 nt2.59□□□□□ -1.99
CDC9P04819 STB4YMR019W 2850 nt2.59□□□□□ -2
CDC9P04819 YKU80YMR106C 1890 nt2.58□□□□□ -2
CDC9P04819 ECM29YHL030W 5607 nt2.58□□□□□ -2
CDC9P04819 YLR146W-AYLR146W-A 189 nt2.58□□□□□ -2
CDC9P04819 SMA2YML066C 1110 nt2.58□□□□□ -2
CDC9P04819 MMS1YPR164W 4224 nt2.58□□□□□ -2
CDC9P04819 YDR098C-BYDR098C-B 5268 nt2.57□□□□□ -2
CDC9P04819 YDR210C-DYDR210C-D 5268 nt2.57□□□□□ -2
CDC9P04819 YDR316W-BYDR316W-B 5268 nt2.57□□□□□ -2
CDC9P04819 YDR365W-BYDR365W-B 5268 nt2.57□□□□□ -2
CDC9P04819 YER138CYER138C 5268 nt2.57□□□□□ -2
CDC9P04819 YER160CYER160C 5268 nt2.57□□□□□ -2
CDC9P04819 YGR038C-BYGR038C-B 5268 nt2.57□□□□□ -2
CDC9P04819 YGR161C-DYGR161C-D 5268 nt2.57□□□□□ -2
CDC9P04819 YJR027WYJR027W 5268 nt2.57□□□□□ -2
CDC9P04819 YLR157C-BYLR157C-B 5268 nt2.57□□□□□ -2
CDC9P04819 YML039WYML039W 5268 nt2.57□□□□□ -2
CDC9P04819 YML045WYML045W 5268 nt2.57□□□□□ -2
CDC9P04819 YMR050CYMR050C 5268 nt2.57□□□□□ -2
CDC9P04819 YOL103W-BYOL103W-B 5268 nt2.57□□□□□ -2
CDC9P04819 YBR012W-BYBR012W-B 5271 nt2.57□□□□□ -2
CDC9P04819 YOR142W-BYOR142W-B 5268 nt2.57□□□□□ -2
CDC9P04819 YPL257W-BYPL257W-B 5268 nt2.57□□□□□ -2
CDC9P04819 YPR158W-BYPR158W-B 5271 nt2.57□□□□□ -2
CDC9P04819 EDS1YBR033W 2760 nt2.57□□□□□ -2
CDC9P04819 YIL169CYIL169C 2988 nt2.57□□□□□ -2
CDC9P04819 YDR286CYDR286C 345 nt2.57□□□□□ -2
CDC9P04819 RPS22AYJL190C 393 nt2.57□□□□□ -2
CDC9P04819 MCM22YJR135C 720 nt2.57□□□□□ -2
CDC9P04819 YOP1YPR028W 543 nt2.57□□□□□ -2
CDC9P04819 SET2YJL168C 2202 nt2.57□□□□□ -2
CDC9P04819 SLM1YIL105C 2061 nt2.56□□□□□ -2
CDC9P04819 YDR344CYDR344C 444 nt2.56□□□□□ -2
CDC9P04819 YIL102CYIL102C 306 nt2.56□□□□□ -2
CDC9P04819 YJL015CYJL015C 285 nt2.56□□□□□ -2
CDC9P04819 PCC1YKR095W-A 267 nt2.56□□□□□ -2
CDC9P04819 YOR333CYOR333C 417 nt2.56□□□□□ -2
CDC9P04819 YPL152W-AYPL152W-A 99 nt2.56□□□□□ -2
CDC9P04819 VPS34YLR240W 2628 nt2.56□□□□□ -2
CDC9P04819 GRR1YJR090C 3456 nt2.56□□□□□ -2
CDC9P04819 FLO11YIR019C 4104 nt2.56□□□□□ -2
CDC9P04819 IRR1YIL026C 3453 nt2.55□□□□□ -2
CDC9P04819 ERP6YGL002W 651 nt2.55□□□□□ -2
CDC9P04819 YML007C-AYML007C-A 111 nt2.55□□□□□ -2
CDC9P04819 YBL083CYBL083C 426 nt2.55□□□□□ -2
CDC9P04819 ORC2YBR060C 1863 nt2.55□□□□□ -2
CDC9P04819 NUT2YPR168W 474 nt2.55□□□□□ -2
CDC9P04819 YBL005W-BYBL005W-B 5268 nt2.55□□□□□ -2
CDC9P04819 VTC3YPL019C 2508 nt2.54□□□□□ -2
CDC9P04819 YDR239CYDR239C 2364 nt2.54□□□□□ -2
CDC9P04819 HDA3YPR179C 1968 nt2.54□□□□□ -2
CDC9P04819 MET18YIL128W 3099 nt2.54□□□□□ -2
CDC9P04819 SWR1YDR334W 4545 nt2.54□□□□□ -2
CDC9P04819 tW(CCA)G1tW(CCA)G1 72 nt2.54□□□□□ -2
CDC9P04819 tW(CCA)G2tW(CCA)G2 72 nt2.54□□□□□ -2
CDC9P04819 tW(CCA)JtW(CCA)J 72 nt2.54□□□□□ -2
CDC9P04819 tW(CCA)KtW(CCA)K 72 nt2.54□□□□□ -2
CDC9P04819 tW(CCA)MtW(CCA)M 72 nt2.54□□□□□ -2
CDC9P04819 tW(CCA)PtW(CCA)P 72 nt2.54□□□□□ -2
CDC9P04819 SWI6YLR182W 2412 nt2.54□□□□□ -2
CDC9P04819 KRE33YNL132W 3171 nt2.54□□□□□ -2
CDC9P04819 DBP6YNR038W 1890 nt2.54□□□□□ -2
CDC9P04819 SGM1YJR134C 2124 nt2.53□□□□□ -2
CDC9P04819 COS111YBR203W 2775 nt2.53□□□□□ -2
CDC9P04819 NPC2YDL046W 522 nt2.53□□□□□ -2
CDC9P04819 PEX4YGR133W 552 nt2.53□□□□□ -2
CDC9P04819 RPL42BYHR141C 321 nt2.53□□□□□ -2
CDC9P04819 YKL183C-AYKL183C-A 213 nt2.53□□□□□ -2
CDC9P04819 YNL114CYNL114C 372 nt2.53□□□□□ -2
CDC9P04819 RPL42AYNL162W 321 nt2.53□□□□□ -2
CDC9P04819 ACM1YPL267W 630 nt2.53□□□□□ -2
CDC9P04819 SMC6YLR383W 3345 nt2.53□□□□□ -2
CDC9P04819 MSB2YGR014W 3921 nt2.52□□□□□ -2.01
CDC9P04819 PNC1YGL037C 651 nt2.52□□□□□ -2.01
CDC9P04819 YHR086W-AYHR086W-A 162 nt2.52□□□□□ -2.01
CDC9P04819 SRB8YCR081W 4284 nt2.52□□□□□ -2.01
CDC9P04819 PSD2YGR170W 3417 nt2.51□□□□□ -2.01
CDC9P04819 CYR1YJL005W 6081 nt2.51□□□□□ -2.01
CDC9P04819 YDR209CYDR209C 414 nt2.51□□□□□ -2.01
CDC9P04819 HYP2YEL034W 474 nt2.51□□□□□ -2.01
CDC9P04819 YHL042WYHL042W 453 nt2.51□□□□□ -2.01
CDC9P04819 YIL174WYIL174W 228 nt2.51□□□□□ -2.01
CDC9P04819 YJL222W-AYJL222W-A 228 nt2.51□□□□□ -2.01
CDC9P04819 YAL059C-AYAL059C-A 423 nt2.51□□□□□ -2.01
CDC9P04819 SRO77YBL106C 3033 nt2.51□□□□□ -2.01
Retrieved 100 of 7,029 protein–RNA pairs in 35.3 ms